RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 GREB1Q4ZG55 1949 aa12.57□□□□□ -0.4
UBA3-211ENST00000493957 DENND4CQ5VZ89 1909 aa12.57□□□□□ -0.4
UBA3-211ENST00000493957 PPP1R3GB7ZBB8 358 aa12.57□□□□□ -0.4
UBA3-211ENST00000493957 SYN3O14994 580 aa12.57□□□□□ -0.4
UBA3-211ENST00000493957 TBC1D4O60343 1298 aa12.57□□□□□ -0.4
UBA3-211ENST00000493957 GLUD1P00367 558 aa12.57□□□□□ -0.4
UBA3-211ENST00000493957 KRT19P08727 400 aa12.57□□□□□ -0.4
UBA3-211ENST00000493957 OR4Q2P0C623 313 aa12.57□□□□□ -0.4
UBA3-211ENST00000493957 OR1D2P34982 312 aa12.57□□□□□ -0.4
UBA3-211ENST00000493957 TAF6P49848 677 aa12.57□□□□□ -0.4
UBA3-211ENST00000493957 CDR1P51861 262 aa12.57□□□□□ -0.4
UBA3-211ENST00000493957 ARPP19P56211 112 aa12.57□□□□□ -0.4
UBA3-211ENST00000493957 BFSP1Q12934 665 aa12.57□□□□□ -0.4
UBA3-211ENST00000493957 SMAD4Q13485 552 aaKnown RBP12.57□□□□□ -0.4
UBA3-211ENST00000493957 NFIL3Q16649 462 aa12.57□□□□□ -0.4
UBA3-211ENST00000493957 COBLL1Q53SF7 1204 aa12.57□□□□□ -0.4
UBA3-211ENST00000493957 TJAP1Q5JTD0 557 aa12.57□□□□□ -0.4
UBA3-211ENST00000493957 C1orf220Q5T0J3 134 aa12.57□□□□□ -0.4
UBA3-211ENST00000493957 ANKRD40Q6AI12 368 aa12.57□□□□□ -0.4
UBA3-211ENST00000493957 CENPPQ6IPU0 288 aa12.57□□□□□ -0.4
UBA3-211ENST00000493957 LILRA6Q6PI73 481 aa12.57□□□□□ -0.4
UBA3-211ENST00000493957 ANKS3Q6ZW76 656 aa12.57□□□□□ -0.4
UBA3-211ENST00000493957 GPR65Q8IYL9 337 aa12.57□□□□□ -0.4
UBA3-211ENST00000493957 CACTINQ8WUQ7 758 aaKnown RBP12.57□□□□□ -0.4
UBA3-211ENST00000493957 TMEM174Q8WUU8 243 aa12.57□□□□□ -0.4
UBA3-211ENST00000493957 ANKRD36BP1Q96IX9 119 aa12.57□□□□□ -0.4
UBA3-211ENST00000493957 TMEM209Q96SK2 561 aa12.57□□□□□ -0.4
UBA3-211ENST00000493957 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.57□□□□□ -0.4
UBA3-211ENST00000493957 FBXL5Q9UKA1 691 aa12.57□□□□□ -0.4
UBA3-211ENST00000493957 BACE2Q9Y5Z0 518 aa12.57□□□□□ -0.4
UBA3-211ENST00000493957 WDR27A2RRH5 827 aa12.56□□□□□ -0.4
UBA3-211ENST00000493957 CYB561D2O14569 222 aa12.56□□□□□ -0.4
UBA3-211ENST00000493957 HCRTO43612 131 aa12.56□□□□□ -0.4
UBA3-211ENST00000493957 RFPL2O75678 378 aa12.56□□□□□ -0.4
UBA3-211ENST00000493957 KIF20AO95235 890 aa12.56□□□□□ -0.4
UBA3-211ENST00000493957 CST3P01034 146 aaPredicted RBP12.56□□□□□ -0.4
UBA3-211ENST00000493957 TNNC2P02585 160 aa12.56□□□□□ -0.4
UBA3-211ENST00000493957 TRIM49P0CI25 452 aa12.56□□□□□ -0.4
UBA3-211ENST00000493957 TRIM49CP0CI26 452 aa12.56□□□□□ -0.4
UBA3-211ENST00000493957 TNNI1P19237 187 aa12.56□□□□□ -0.4
UBA3-211ENST00000493957 ROR1Q01973 937 aa12.56□□□□□ -0.4
UBA3-211ENST00000493957 CREMQ03060 361 aa12.56□□□□□ -0.4
UBA3-211ENST00000493957 SURF1Q15526 300 aa12.56□□□□□ -0.4
UBA3-211ENST00000493957 DUOXA2Q1HG44 320 aa12.56□□□□□ -0.4
UBA3-211ENST00000493957 AAK1Q2M2I8 961 aa12.56□□□□□ -0.4
UBA3-211ENST00000493957 CTXN3Q4LDR2 81 aa12.56□□□□□ -0.4
UBA3-211ENST00000493957 TDRD10Q5VZ19 366 aaKnown RBP12.56□□□□□ -0.4
UBA3-211ENST00000493957 KLHL10Q6JEL2 608 aa12.56□□□□□ -0.4
UBA3-211ENST00000493957 TMC5Q6UXY8 1006 aa12.56□□□□□ -0.4
UBA3-211ENST00000493957 TRAPPC11Q7Z392 1133 aa12.56□□□□□ -0.4
UBA3-211ENST00000493957 PPFIBP1Q86W92 1011 aa12.56□□□□□ -0.4
UBA3-211ENST00000493957 ADAMTS19Q8TE59 1207 aa12.56□□□□□ -0.4
UBA3-211ENST00000493957 PARD3BQ8TEW8 1205 aa12.56□□□□□ -0.4
UBA3-211ENST00000493957 FNBP1Q96RU3 617 aa12.56□□□□□ -0.4
UBA3-211ENST00000493957 RTP3Q9BQQ7 232 aa12.56□□□□□ -0.4
UBA3-211ENST00000493957 KIAA1468Q9P260 1216 aa12.56□□□□□ -0.4
UBA3-211ENST00000493957 FBXW11Q9UKB1 542 aa12.56□□□□□ -0.4
UBA3-211ENST00000493957 ITGA11Q9UKX5 1188 aa12.56□□□□□ -0.4
UBA3-211ENST00000493957 CTNND2Q9UQB3 1225 aa12.56□□□□□ -0.4
UBA3-211ENST00000493957 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.56□□□□□ -0.4
UBA3-211ENST00000493957 ZNF638Q14966 1978 aaKnown RBP12.56□□□□□ -0.4
UBA3-211ENST00000493957 BDP1A6H8Y1 2624 aa12.55□□□□□ -0.4
UBA3-211ENST00000493957 FSD2A1L4K1 749 aa12.55□□□□□ -0.4
UBA3-211ENST00000493957 KPNA7A9QM74 516 aa12.55□□□□□ -0.4
UBA3-211ENST00000493957 VNN2O95498 520 aa12.55□□□□□ -0.4
UBA3-211ENST00000493957 SRGAP2BP0DMP2 458 aa12.55□□□□□ -0.4
UBA3-211ENST00000493957 ODC1P11926 461 aa12.55□□□□□ -0.4
UBA3-211ENST00000493957 STX17P56962 302 aa12.55□□□□□ -0.4
UBA3-211ENST00000493957 YWHAHQ04917 246 aaPredicted RBP12.55□□□□□ -0.4
UBA3-211ENST00000493957 ADAM9Q13443 819 aa12.55□□□□□ -0.4
UBA3-211ENST00000493957 RAB33AQ14088 237 aa12.55□□□□□ -0.4
UBA3-211ENST00000493957 MYBPC2Q14324 1141 aa12.55□□□□□ -0.4
UBA3-211ENST00000493957 EDRF1Q3B7T1 1238 aa12.55□□□□□ -0.4
UBA3-211ENST00000493957 SV2CQ496J9 727 aa12.55□□□□□ -0.4
UBA3-211ENST00000493957 WSCD1Q658N2 575 aa12.55□□□□□ -0.4
UBA3-211ENST00000493957 OVOS1Q6IE37 1185 aa12.55□□□□□ -0.4
UBA3-211ENST00000493957 ZNF280DQ6N043 979 aa12.55□□□□□ -0.4
UBA3-211ENST00000493957 ZC3H3Q8IXZ2 948 aaKnown RBP12.55□□□□□ -0.4
UBA3-211ENST00000493957 FAM186BQ8IYM0 893 aa12.55□□□□□ -0.4
UBA3-211ENST00000493957 KREMEN2Q8NCW0 462 aa12.55□□□□□ -0.4
UBA3-211ENST00000493957 APPL2Q8NEU8 664 aa12.55□□□□□ -0.4
UBA3-211ENST00000493957 OR10T2Q8NGX3 314 aa12.55□□□□□ -0.4
UBA3-211ENST00000493957 NELFBQ8WX92 580 aa12.55□□□□□ -0.4
UBA3-211ENST00000493957 SUSD6Q92537 303 aa12.55□□□□□ -0.4
UBA3-211ENST00000493957 ZNF560Q96MR9 790 aa12.55□□□□□ -0.4
UBA3-211ENST00000493957 DUSP9Q99956 384 aaKnown RBP12.55□□□□□ -0.4
UBA3-211ENST00000493957 COL25A1Q9BXS0 654 aaPredicted RBP12.55□□□□□ -0.4
UBA3-211ENST00000493957 DZANK1Q9NVP4 752 aa12.55□□□□□ -0.4
UBA3-211ENST00000493957 H7C4K7 107 aa12.54□□□□□ -0.4
UBA3-211ENST00000493957 OAZ2O95190 189 aa12.54□□□□□ -0.4
UBA3-211ENST00000493957 SEC24AO95486 1093 aa12.54□□□□□ -0.4
UBA3-211ENST00000493957 VNN1O95497 513 aa12.54□□□□□ -0.4
UBA3-211ENST00000493957 C4BPAP04003 597 aaKnown RBP12.54□□□□□ -0.4
UBA3-211ENST00000493957 CYP11A1P05108 521 aa12.54□□□□□ -0.4
UBA3-211ENST00000493957 TYMPP19971 482 aa12.54□□□□□ -0.4
UBA3-211ENST00000493957 SP100P23497 879 aaPredicted RBP12.54□□□□□ -0.4
UBA3-211ENST00000493957 CCNE1P24864 410 aa12.54□□□□□ -0.4
UBA3-211ENST00000493957 VAMP7P51809 220 aa12.54□□□□□ -0.4
UBA3-211ENST00000493957 MYL6P60660 151 aa12.54□□□□□ -0.4
UBA3-211ENST00000493957 CLDN10P78369 228 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms