RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 ZNF185O15231 689 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 GPANK1O95872 356 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 CHEK2O96017 543 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 EN2P19622 333 aaPredicted RBP4.85□□□□□ -1.63
CLK1-213ENST00000492793 CHRM3P20309 590 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 PRIM2P49643 509 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 HSD11B2P80365 405 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 FMO1Q01740 532 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 FZD5Q13467 585 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 PREPLQ4J6C6 727 aaPredicted RBP4.85□□□□□ -1.63
CLK1-213ENST00000492793 EMC10Q5UCC4 262 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 GDF7Q7Z4P5 450 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 SKAP1Q86WV1 359 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 DNAJC5GQ8N7S2 189 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 FBXO41Q8TF61 875 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 EDAQ92838 391 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 PMM1Q92871 262 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 CCDC138Q96M89 665 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 WWC2-AS2Q96NR7 200 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 DCLRE1CQ96SD1 692 aaKnown RBP4.85□□□□□ -1.63
CLK1-213ENST00000492793 STRBPQ96SI9 672 aaKnown RBP4.85□□□□□ -1.63
CLK1-213ENST00000492793 CNPPD1Q9BV87 410 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 STK31Q9BXU1 1019 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 TTYH3Q9C0H2 523 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 KLC2Q9H0B6 622 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 BTBD1Q9H0C5 482 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 NLRC4Q9NPP4 1024 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 FAM30AQ9NZY2 134 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 RNF181Q9P0P0 153 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 AFF4Q9UHB7 1163 aaKnown RBP4.85□□□□□ -1.63
CLK1-213ENST00000492793 ITGB1BP2Q9UKP3 347 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 MED16Q9Y2X0 877 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 DAAM1Q9Y4D1 1078 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 PLEKHM1Q9Y4G2 1056 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 COMMD10Q9Y6G5 202 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 A0A1B0GTW7 788 aa4.84□□□□□ -1.63
CLK1-213ENST00000492793 RASSF9O75901 435 aa4.84□□□□□ -1.63
CLK1-213ENST00000492793 ABHD16AO95870 558 aa4.84□□□□□ -1.63
CLK1-213ENST00000492793 THP07101 528 aa4.84□□□□□ -1.63
CLK1-213ENST00000492793 PARP1P09874 1014 aaKnown RBP4.84□□□□□ -1.63
CLK1-213ENST00000492793 RPL17P18621 184 aaKnown RBP4.84□□□□□ -1.63
CLK1-213ENST00000492793 GCSHP23434 173 aa4.84□□□□□ -1.63
CLK1-213ENST00000492793 STT3AP46977 705 aa4.84□□□□□ -1.63
CLK1-213ENST00000492793 PTTG1IPP53801 180 aa4.84□□□□□ -1.63
CLK1-213ENST00000492793 UCP3P55916 312 aa4.84□□□□□ -1.63
CLK1-213ENST00000492793 RPS16P62249 146 aaKnown RBP4.84□□□□□ -1.63
CLK1-213ENST00000492793 POU6F2P78424 691 aaPredicted RBP4.84□□□□□ -1.63
CLK1-213ENST00000492793 CTBP1Q13363 440 aa4.84□□□□□ -1.63
CLK1-213ENST00000492793 SPDYE7PQ495Y7 208 aa4.84□□□□□ -1.63
CLK1-213ENST00000492793 PDCD4Q53EL6 469 aaKnown RBP4.84□□□□□ -1.63
CLK1-213ENST00000492793 FAM102AQ5T9C2 384 aaPredicted RBP4.84□□□□□ -1.63
CLK1-213ENST00000492793 AGAP9Q5VTM2 703 aa4.84□□□□□ -1.63
CLK1-213ENST00000492793 MORC1Q86VD1 984 aa4.84□□□□□ -1.63
CLK1-213ENST00000492793 SESTD1Q86VW0 696 aa4.84□□□□□ -1.63
CLK1-213ENST00000492793 ZFPM1Q8IX07 1006 aa4.84□□□□□ -1.63
CLK1-213ENST00000492793 RHOT2Q8IXI1 618 aa4.84□□□□□ -1.63
CLK1-213ENST00000492793 KRT78Q8N1N4 520 aa4.84□□□□□ -1.63
CLK1-213ENST00000492793 CFAP52Q8N1V2 620 aa4.84□□□□□ -1.63
CLK1-213ENST00000492793 SAMD3Q8N6K7 520 aa4.84□□□□□ -1.63
CLK1-213ENST00000492793 VPS37AQ8NEZ2 397 aa4.84□□□□□ -1.63
CLK1-213ENST00000492793 CXorf38Q8TB03 319 aa4.84□□□□□ -1.63
CLK1-213ENST00000492793 TRIB1Q96RU8 372 aa4.84□□□□□ -1.63
CLK1-213ENST00000492793 NEU1Q99519 415 aa4.84□□□□□ -1.63
CLK1-213ENST00000492793 ZNF700Q9H0M5 742 aa4.84□□□□□ -1.63
CLK1-213ENST00000492793 GPR35Q9HC97 309 aa4.84□□□□□ -1.63
CLK1-213ENST00000492793 CD248Q9HCU0 757 aa4.84□□□□□ -1.63
CLK1-213ENST00000492793 KLHL11Q9NVR0 708 aa4.84□□□□□ -1.63
CLK1-213ENST00000492793 STK32BQ9NY57 414 aa4.84□□□□□ -1.63
CLK1-213ENST00000492793 HDAC9Q9UKV0 1011 aa4.84□□□□□ -1.63
CLK1-213ENST00000492793 MAP3K2Q9Y2U5 619 aa4.84□□□□□ -1.63
CLK1-213ENST00000492793 ARID1BQ8NFD5 2236 aaPredicted RBP4.83□□□□□ -1.64
CLK1-213ENST00000492793 TMEM233B4DJY2 109 aa4.83□□□□□ -1.64
CLK1-213ENST00000492793 DIRC3C9JPN6 131 aa4.83□□□□□ -1.64
CLK1-213ENST00000492793 E9PLN8 166 aa4.83□□□□□ -1.64
CLK1-213ENST00000492793 FOXD2O60548 495 aaPredicted RBP4.83□□□□□ -1.64
CLK1-213ENST00000492793 DNAJB5O75953 348 aa4.83□□□□□ -1.64
CLK1-213ENST00000492793 PIM1P11309 404 aaPredicted RBP4.83□□□□□ -1.64
CLK1-213ENST00000492793 FGFR4P22455 802 aa4.83□□□□□ -1.64
CLK1-213ENST00000492793 ACRV1P26436 265 aa4.83□□□□□ -1.64
CLK1-213ENST00000492793 SLC11A2P49281 568 aa4.83□□□□□ -1.64
CLK1-213ENST00000492793 SATB1Q01826 763 aa4.83□□□□□ -1.64
CLK1-213ENST00000492793 SLFN5Q08AF3 891 aa4.83□□□□□ -1.64
CLK1-213ENST00000492793 NRN1LQ496H8 165 aa4.83□□□□□ -1.64
CLK1-213ENST00000492793 USP39Q53GS9 565 aaKnown RBP4.83□□□□□ -1.64
CLK1-213ENST00000492793 FBLN7Q53RD9 439 aa4.83□□□□□ -1.64
CLK1-213ENST00000492793 RABL3Q5HYI8 236 aa4.83□□□□□ -1.64
CLK1-213ENST00000492793 FAM160B1Q5W0V3 765 aa4.83□□□□□ -1.64
CLK1-213ENST00000492793 NAIF1Q69YI7 327 aaPredicted RBP4.83□□□□□ -1.64
CLK1-213ENST00000492793 TAPT1Q6NXT6 567 aa4.83□□□□□ -1.64
CLK1-213ENST00000492793 C1orf228Q6PIY5 440 aa4.83□□□□□ -1.64
CLK1-213ENST00000492793 LAYNQ6UX15 382 aa4.83□□□□□ -1.64
CLK1-213ENST00000492793 C1orf210Q8IVY1 113 aa4.83□□□□□ -1.64
CLK1-213ENST00000492793 MAPKAPK5Q8IW41 473 aa4.83□□□□□ -1.64
CLK1-213ENST00000492793 RAPGEF4Q8WZA2 1011 aa4.83□□□□□ -1.64
CLK1-213ENST00000492793 RNF31Q96EP0 1072 aa4.83□□□□□ -1.64
CLK1-213ENST00000492793 RIPOR3Q96MK2 946 aa4.83□□□□□ -1.64
CLK1-213ENST00000492793 CDK5RAP1Q96SZ6 601 aaKnown RBP4.83□□□□□ -1.64
CLK1-213ENST00000492793 VKORC1Q9BQB6 163 aa4.83□□□□□ -1.64
CLK1-213ENST00000492793 POLR3GLQ9BT43 218 aa4.83□□□□□ -1.64
CLK1-213ENST00000492793 TEX101Q9BY14 249 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms