RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 ST13P50502 369 aaKnown RBP6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 HSD17B4P51659 736 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 ARID5AQ03989 594 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 GFPT1Q06210 699 aaPredicted RBP6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 MTMR1Q13613 665 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 SEPT6Q14141 434 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 SLBPQ14493 270 aaKnown RBP eCLIP6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 CASP8Q14790 479 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 RPS6KA1Q15418 735 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 NAB2Q15742 525 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 ARSHQ5FYA8 562 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 MEI1Q5TIA1 1274 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 KLHDC7AQ5VTJ3 777 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 LEKR1Q6ZMV7 388 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 C1orf186Q6ZWK4 172 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 H2AFVQ71UI9 128 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 INTS8Q75QN2 995 aaKnown RBP6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 MIGA2Q7L4E1 593 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 OTUD6AQ7L8S5 288 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 SPACA3Q8IXA5 215 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 IFT20Q8IY31 132 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 MMGT1Q8N4V1 131 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 FAM133AQ8N9E0 248 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 MFSD2AQ8NA29 543 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 HVCN1Q96D96 273 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 CDHR1Q96JP9 859 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 PBKQ96KB5 322 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 PKNOX2Q96KN3 472 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 UIMC1Q96RL1 719 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 OSBPL9Q96SU4 736 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 MMS19Q96T76 1030 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 FUT8Q9BYC5 575 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 FOXQ1Q9C009 403 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 TMEM39BQ9GZU3 492 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 DEFB129Q9H1M3 183 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 GANQ9H2C0 597 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 UNC45AQ9H3U1 944 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 PRDM5Q9NQX1 630 aaPredicted RBP6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 RGL1Q9NZL6 768 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 HDAC6Q9UBN7 1215 aa6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 DBR1Q9UK59 544 aaKnown RBP6.36□□□□□ -1.39
ATPAF1-204ENST00000474020 MYH7BA7E2Y1 1941 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 ASTN1O14525 1302 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 RPTORQ8N122 1335 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 SIPA1L1O43166 1804 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 A0A0U1RQJ8 604 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 GFRA2O00451 464 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 CES2O00748 559 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 MAP2K7O14733 419 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 EPHB6O15197 1021 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 P4HA2O15460 535 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 MAFGO15525 162 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 HSF2BPO75031 334 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 SLITRK3O94933 977 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 SLITRK5O94991 958 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 LYPLA2O95372 231 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 PLEKP08567 350 aaPredicted RBP6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 PLS3P13797 630 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 ERCC3P19447 782 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 PON1P27169 355 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 CD96P40200 585 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 PRKCIP41743 596 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 CYP2J2P51589 502 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 ZNF131P52739 623 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 EPHB4P54760 987 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 PSMC5P62195 406 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 PSMC6P62333 389 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 VSNL1P62760 191 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 APBA1Q02410 837 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 CXCL9Q07325 125 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 PAK2Q13177 524 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 RASA3Q14644 834 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 R3HDM1Q15032 1099 aaKnown RBP6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 TAF1CQ15572 869 aaPredicted RBP6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 PPP2R5EQ16537 467 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 NKG7Q16617 165 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 NKPD1Q17RQ9 610 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 SHROOM1Q2M3G4 852 aaPredicted RBP6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 TKFCQ3LXA3 575 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 GNPTABQ3T906 1256 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 BEND6Q5SZJ8 279 aaPredicted RBP6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 ANGEL2Q5VTE6 544 aaKnown RBP6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 ARHGEF16Q5VV41 709 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 RNF207Q6ZRF8 634 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 ZNF720Q7Z2F6 126 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 ZNF572Q7Z3I7 529 aaPredicted RBP6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 APOBEC3FQ8IUX4 373 aaKnown RBP6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 HID1Q8IV36 788 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 CPXCR1Q8N123 301 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 PIGOQ8TEQ8 1089 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 ATRIPQ8WXE1 791 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 ASB11Q8WXH4 323 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 CTNNBL1Q8WYA6 563 aaPredicted RBP6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 ATP6V0A1Q93050 837 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 SLC35C1Q96A29 364 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 EXOC4Q96A65 974 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 FAM81BQ96LP2 452 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 NAP1L3Q99457 506 aaPredicted RBP6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 MPHOSPH6Q99547 160 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms