RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 ABCD1P33897 745 aa14.39□□□□□ -0.11
CPSF4-210ENST00000469897 TMEM132DQ14C87 1099 aa14.39□□□□□ -0.11
CPSF4-210ENST00000469897 RRAGBQ5VZM2 374 aa14.39□□□□□ -0.11
CPSF4-210ENST00000469897 ZC3H14Q6PJT7 736 aaKnown RBP14.39□□□□□ -0.11
CPSF4-210ENST00000469897 DNAJB7Q7Z6W7 309 aaPredicted RBP14.39□□□□□ -0.11
CPSF4-210ENST00000469897 SFR1Q86XK3 245 aa14.39□□□□□ -0.11
CPSF4-210ENST00000469897 IRF7Q92985 503 aa14.39□□□□□ -0.11
CPSF4-210ENST00000469897 DNAJC25Q9H1X3 360 aa14.39□□□□□ -0.11
CPSF4-210ENST00000469897 ST6GALNAC4Q9H4F1 302 aa14.39□□□□□ -0.11
CPSF4-210ENST00000469897 SLITRK6Q9H5Y7 841 aa14.39□□□□□ -0.11
CPSF4-210ENST00000469897 ASB7Q9H672 318 aa14.39□□□□□ -0.11
CPSF4-210ENST00000469897 ZNF334Q9HCZ1 680 aaPredicted RBP14.39□□□□□ -0.11
CPSF4-210ENST00000469897 TBC1D7Q9P0N9 293 aa14.39□□□□□ -0.11
CPSF4-210ENST00000469897 FBXO2Q9UK22 296 aaPredicted RBP14.39□□□□□ -0.11
CPSF4-210ENST00000469897 NDRG2Q9UN36 371 aaKnown RBP14.39□□□□□ -0.11
CPSF4-210ENST00000469897 MRPS17Q9Y2R5 130 aaKnown RBP14.39□□□□□ -0.11
CPSF4-210ENST00000469897 DERAQ9Y315 318 aa14.39□□□□□ -0.11
CPSF4-210ENST00000469897 SRPRBQ9Y5M8 271 aaKnown RBP14.39□□□□□ -0.11
CPSF4-210ENST00000469897 STYXL1Q9Y6J8 313 aa14.39□□□□□ -0.11
CPSF4-210ENST00000469897 MTMR11A4FU01 709 aa14.38□□□□□ -0.11
CPSF4-210ENST00000469897 MYMKA6NI61 221 aa14.38□□□□□ -0.11
CPSF4-210ENST00000469897 MAN2B1O00754 1011 aa14.38□□□□□ -0.11
CPSF4-210ENST00000469897 CYB561D2O14569 222 aa14.38□□□□□ -0.11
CPSF4-210ENST00000469897 ZNF263O14978 683 aa14.38□□□□□ -0.11
CPSF4-210ENST00000469897 PDCP20941 246 aa14.38□□□□□ -0.11
CPSF4-210ENST00000469897 SYT1P21579 422 aa14.38□□□□□ -0.11
CPSF4-210ENST00000469897 ADSSP30520 456 aa14.38□□□□□ -0.11
CPSF4-210ENST00000469897 KCNA1Q09470 495 aa14.38□□□□□ -0.11
CPSF4-210ENST00000469897 PLD1Q13393 1074 aa14.38□□□□□ -0.11
CPSF4-210ENST00000469897 MYBPC2Q14324 1141 aa14.38□□□□□ -0.11
CPSF4-210ENST00000469897 ZNF528Q3MIS6 628 aa14.38□□□□□ -0.11
CPSF4-210ENST00000469897 TSSK4Q6SA08 328 aa14.38□□□□□ -0.11
CPSF4-210ENST00000469897 CRELD2Q6UXH1 353 aaPredicted RBP14.38□□□□□ -0.11
CPSF4-210ENST00000469897 SV2BQ7L1I2 683 aa14.38□□□□□ -0.11
CPSF4-210ENST00000469897 TMC8Q8IU68 726 aa14.38□□□□□ -0.11
CPSF4-210ENST00000469897 MFSD6LQ8IWD5 586 aa14.38□□□□□ -0.11
CPSF4-210ENST00000469897 DCLK2Q8N568 766 aa14.38□□□□□ -0.11
CPSF4-210ENST00000469897 TTC9BQ8N6N2 239 aa14.38□□□□□ -0.11
CPSF4-210ENST00000469897 OR10T2Q8NGX3 314 aa14.38□□□□□ -0.11
CPSF4-210ENST00000469897 POMGNT1Q8WZA1 660 aa14.38□□□□□ -0.11
CPSF4-210ENST00000469897 DNASE1L2Q92874 299 aa14.38□□□□□ -0.11
CPSF4-210ENST00000469897 GPR88Q9GZN0 384 aa14.38□□□□□ -0.11
CPSF4-210ENST00000469897 TRPV4Q9HBA0 871 aa14.38□□□□□ -0.11
CPSF4-210ENST00000469897 DPP3Q9NY33 737 aa14.38□□□□□ -0.11
CPSF4-210ENST00000469897 FBXO4Q9UKT5 387 aa14.38□□□□□ -0.11
CPSF4-210ENST00000469897 COL4A3Q01955 1670 aa14.37□□□□□ -0.11
CPSF4-210ENST00000469897 CACNA1HO95180 2353 aa14.37□□□□□ -0.11
CPSF4-210ENST00000469897 HEPACAM2A8MVW5 462 aa14.37□□□□□ -0.11
CPSF4-210ENST00000469897 PAX3P23760 479 aa14.37□□□□□ -0.11
CPSF4-210ENST00000469897 ID4P47928 161 aa14.37□□□□□ -0.11
CPSF4-210ENST00000469897 RESTQ13127 1097 aa14.37□□□□□ -0.11
CPSF4-210ENST00000469897 SLC39A12Q504Y0 691 aa14.37□□□□□ -0.11
CPSF4-210ENST00000469897 STXBP5Q5T5C0 1151 aa14.37□□□□□ -0.11
CPSF4-210ENST00000469897 LRRTM3Q86VH5 581 aa14.37□□□□□ -0.11
CPSF4-210ENST00000469897 METTL23Q86XA0 190 aa14.37□□□□□ -0.11
CPSF4-210ENST00000469897 ARID3BQ8IVW6 561 aaPredicted RBP14.37□□□□□ -0.11
CPSF4-210ENST00000469897 KIAA2013Q8IYS2 634 aa14.37□□□□□ -0.11
CPSF4-210ENST00000469897 ZNF687Q8N1G0 1237 aa14.37□□□□□ -0.11
CPSF4-210ENST00000469897 THEM5Q8N1Q8 247 aa14.37□□□□□ -0.11
CPSF4-210ENST00000469897 FAM200AQ8TCP9 573 aa14.37□□□□□ -0.11
CPSF4-210ENST00000469897 FAM3CQ92520 227 aa14.37□□□□□ -0.11
CPSF4-210ENST00000469897 DNAJC19Q96DA6 116 aa14.37□□□□□ -0.11
CPSF4-210ENST00000469897 RSPRY1Q96DX4 576 aa14.37□□□□□ -0.11
CPSF4-210ENST00000469897 BORCS6Q96GS4 357 aa14.37□□□□□ -0.11
CPSF4-210ENST00000469897 HINFPQ9BQA5 517 aa14.37□□□□□ -0.11
CPSF4-210ENST00000469897 PYM1Q9BRP8 204 aaKnown RBP14.37□□□□□ -0.11
CPSF4-210ENST00000469897 STRA6Q9BX79 667 aa14.37□□□□□ -0.11
CPSF4-210ENST00000469897 ATXN3LQ9H3M9 355 aa14.37□□□□□ -0.11
CPSF4-210ENST00000469897 MRPL44Q9H9J2 332 aaKnown RBP14.37□□□□□ -0.11
CPSF4-210ENST00000469897 LMAN1LQ9HAT1 526 aa14.37□□□□□ -0.11
CPSF4-210ENST00000469897 FOXD4L1Q9NU39 408 aa14.37□□□□□ -0.11
CPSF4-210ENST00000469897 CYP11A1P05108 521 aa14.36□□□□□ -0.11
CPSF4-210ENST00000469897 CCNE1P24864 410 aa14.36□□□□□ -0.11
CPSF4-210ENST00000469897 MAGEA9P43362 315 aa14.36□□□□□ -0.11
CPSF4-210ENST00000469897 RPS9P46781 194 aaKnown RBP14.36□□□□□ -0.11
CPSF4-210ENST00000469897 MTAPQ13126 283 aa14.36□□□□□ -0.11
CPSF4-210ENST00000469897 POSTNQ15063 836 aa14.36□□□□□ -0.11
CPSF4-210ENST00000469897 WSCD1Q658N2 575 aa14.36□□□□□ -0.11
CPSF4-210ENST00000469897 GAREM2Q75VX8 874 aa14.36□□□□□ -0.11
CPSF4-210ENST00000469897 YAF2Q8IY57 180 aa14.36□□□□□ -0.11
CPSF4-210ENST00000469897 SUMF1Q8NBK3 374 aa14.36□□□□□ -0.11
CPSF4-210ENST00000469897 ZSWIM2Q8NEG5 633 aa14.36□□□□□ -0.11
CPSF4-210ENST00000469897 DEPDC1BQ8WUY9 529 aa14.36□□□□□ -0.11
CPSF4-210ENST00000469897 ATRIPQ8WXE1 791 aa14.36□□□□□ -0.11
CPSF4-210ENST00000469897 PSMG2Q969U7 264 aa14.36□□□□□ -0.11
CPSF4-210ENST00000469897 LRRC3BQ96PB8 259 aa14.36□□□□□ -0.11
CPSF4-210ENST00000469897 SEPT5Q99719 369 aaPredicted RBP14.36□□□□□ -0.11
CPSF4-210ENST00000469897 FAM213AQ9BRX8 229 aa14.36□□□□□ -0.11
CPSF4-210ENST00000469897 ZCWPW1Q9H0M4 648 aa14.36□□□□□ -0.11
CPSF4-210ENST00000469897 TRPV5Q9NQA5 729 aa14.36□□□□□ -0.11
CPSF4-210ENST00000469897 STK17AQ9UEE5 414 aa14.36□□□□□ -0.11
CPSF4-210ENST00000469897 DSEQ9UL01 958 aa14.36□□□□□ -0.11
CPSF4-210ENST00000469897 C2CD2Q9Y426 696 aa14.36□□□□□ -0.11
CPSF4-210ENST00000469897 ASB3Q9Y575 518 aa14.36□□□□□ -0.11
CPSF4-210ENST00000469897 PIAS3Q9Y6X2 628 aa14.36□□□□□ -0.11
CPSF4-210ENST00000469897 VWA8A3KMH1 1905 aa14.36□□□□□ -0.11
CPSF4-210ENST00000469897 NCANO14594 1321 aa14.36□□□□□ -0.11
CPSF4-210ENST00000469897 MTCL1Q9Y4B5 1905 aaKnown RBP14.35□□□□□ -0.11
CPSF4-210ENST00000469897 KPNA7A9QM74 516 aa14.35□□□□□ -0.11
CPSF4-210ENST00000469897 KINO60870 393 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms