RNA–Protein interactions for RNA: ENST00000456369.5

CHEK2-221, Transcript of checkpoint kinase 2, human

TSL 3

Gene CHEK2, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-221	ENST00000456369	ZNF233	A6NK53	670 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	PIR	O00625	290 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	PDXK	O00764	312 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	PPEF2	O14830	753 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	CLIC2	O15247	247 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	TEX28	O15482	410 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	UROD	P06132	367 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	KCNA5	P22460	613 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	SSTR3	P32745	418 aa	Predicted RBP	10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	BRCC3	P46736	316 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	AARS	P49588	968 aa	Known RBP eCLIP	10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	GSDMD	P57764	484 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	ELAVL2	Q12926	359 aa	Known RBP	10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	BMS1	Q14692	1282 aa	Known RBP	10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	TMEM132D	Q14C87	1099 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	SNRNP35	Q16560	246 aa	Known RBP	10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	LEXM	Q3ZCV2	418 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	ZCWPW2	Q504Y3	356 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	COBLL1	Q53SF7	1204 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	ZNF658	Q5TYW1	1059 aa	Predicted RBP	10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	FAM171A1	Q5VUB5	890 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	C9orf57	Q5W0N0	161 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	SCARA3	Q6AZY7	606 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	NT5DC4	Q86YG4	428 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	DRC7	Q8IY82	874 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	SMYD4	Q8IYR2	804 aa	Predicted RBP	10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	LNX1	Q8TBB1	728 aa	Predicted RBP	10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	PIK3R5	Q8WYR1	880 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	TTPAL	Q9BTX7	342 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	TMUB1	Q9BVT8	246 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	PRR14	Q9BWN1	585 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	KIAA1586	Q9HCI6	787 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	PDE11A	Q9HCR9	933 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	CLDND1	Q9NY35	253 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	FNIP2	Q9P278	1114 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	MAPK8IP1	Q9UQF2	711 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	SSX2IP	Q9Y2D8	614 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	PTPRJ	Q12913	1337 aa		10.75	□□□□□ -0.69
CHEK2-221	ENST00000456369	ATG2A	Q2TAZ0	1938 aa		10.74	□□□□□ -0.69
CHEK2-221	ENST00000456369		H3BQ06	376 aa	Predicted RBP	10.74	□□□□□ -0.69
CHEK2-221	ENST00000456369		I3L4J1	428 aa		10.74	□□□□□ -0.69
CHEK2-221	ENST00000456369	C2CD2L	O14523	706 aa		10.74	□□□□□ -0.69
CHEK2-221	ENST00000456369	SPTLC1	O15269	473 aa		10.74	□□□□□ -0.69
CHEK2-221	ENST00000456369	XPOT	O43592	962 aa	Known RBP	10.74	□□□□□ -0.69
CHEK2-221	ENST00000456369	TRAPPC3	O43617	180 aa		10.74	□□□□□ -0.69
CHEK2-221	ENST00000456369	TBC1D4	O60343	1298 aa		10.74	□□□□□ -0.69
CHEK2-221	ENST00000456369	BMP1	P13497	986 aa		10.74	□□□□□ -0.69
CHEK2-221	ENST00000456369	KCNQ1	P51787	676 aa		10.74	□□□□□ -0.69
CHEK2-221	ENST00000456369	CLCN4	P51793	760 aa		10.74	□□□□□ -0.69
CHEK2-221	ENST00000456369	MRPS5	P82675	430 aa	Known RBP	10.74	□□□□□ -0.69
CHEK2-221	ENST00000456369	MRPL58	Q14197	206 aa	Known RBP	10.74	□□□□□ -0.69
CHEK2-221	ENST00000456369	MYBPC2	Q14324	1141 aa		10.74	□□□□□ -0.69
CHEK2-221	ENST00000456369	NFIL3	Q16649	462 aa		10.74	□□□□□ -0.69
CHEK2-221	ENST00000456369	KIAA1841	Q6NSI8	718 aa		10.74	□□□□□ -0.69
CHEK2-221	ENST00000456369	C1orf127	Q8N9H9	656 aa		10.74	□□□□□ -0.69
CHEK2-221	ENST00000456369	XXYLT1	Q8NBI6	393 aa		10.74	□□□□□ -0.69
CHEK2-221	ENST00000456369	BEST2	Q8NFU1	509 aa		10.74	□□□□□ -0.69
CHEK2-221	ENST00000456369	RIN2	Q8WYP3	895 aa	Predicted RBP	10.74	□□□□□ -0.69
CHEK2-221	ENST00000456369	SUSD3	Q96L08	255 aa		10.74	□□□□□ -0.69
CHEK2-221	ENST00000456369	CLSTN3	Q9BQT9	956 aa		10.74	□□□□□ -0.69
CHEK2-221	ENST00000456369	EMILIN2	Q9BXX0	1053 aa		10.74	□□□□□ -0.69
CHEK2-221	ENST00000456369	RRAGD	Q9NQL2	400 aa	Predicted RBP	10.74	□□□□□ -0.69
CHEK2-221	ENST00000456369	BARX2	Q9UMQ3	279 aa	Predicted RBP	10.74	□□□□□ -0.69
CHEK2-221	ENST00000456369		M0QZQ0	153 aa		10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	SYN3	O14994	580 aa		10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	ADAM12	O43184	909 aa		10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	KIF20A	O95235	890 aa		10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	C1R	P00736	705 aa		10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	NR3C1	P04150	777 aa		10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	EPCAM	P16422	314 aa		10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	ZNF18	P17022	549 aa		10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	RPL17	P18621	184 aa	Known RBP	10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	TKT	P29401	623 aa	Known RBP	10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	PRCP	P42785	496 aa		10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	CYP2J2	P51589	502 aa		10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	LILRA4	P59901	499 aa		10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	CLDN10	P78369	228 aa		10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	FANCC	Q00597	558 aa		10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	CYP24A1	Q07973	514 aa		10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	STIM1	Q13586	685 aa		10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	PSMD6	Q15008	389 aa		10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	AAK1	Q2M2I8	961 aa		10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	ISM2	Q6H9L7	571 aa		10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	LILRA6	Q6PI73	481 aa		10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	SYCE2	Q6PIF2	218 aa		10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	PRSS55	Q6UWB4	352 aa	Predicted RBP	10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	RSPO2	Q6UXX9	243 aa	Predicted RBP	10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	PPFIBP1	Q86W92	1011 aa		10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	CEP57	Q86XR8	500 aa		10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	PARP9	Q8IXQ6	854 aa		10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	SMRP1	Q8NCR6	262 aa		10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	OR5B17	Q8NGF7	314 aa		10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	BORCS6	Q96GS4	357 aa		10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	FAM84A	Q96KN4	292 aa		10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	MFSD14A	Q96MC6	490 aa		10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	S1PR5	Q9H228	398 aa		10.73	□□□□□ -0.69
CHEK2-221	ENST00000456369	HSD3B7	Q9H2F3	369 aa		10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms