RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 SPON1Q9HCB6 807 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 PRDM5Q9NQX1 630 aaPredicted RBP8.33□□□□□ -1.08
BRCC3-208ENST00000453705 ARGLU1Q9NWB6 273 aaPredicted RBP8.33□□□□□ -1.08
BRCC3-208ENST00000453705 BARHL2Q9NY43 387 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 ADGRE2Q9UHX3 823 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 PCDHB10Q9UN67 800 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 PCDHA4Q9UN74 947 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 AP1M2Q9Y6Q5 423 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 COL4A5P29400 1685 aa8.33□□□□□ -1.08
BRCC3-208ENST00000453705 BTBD18B2RXH4 712 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 SMIM22K7EJ46 135 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 ATXN7O15265 892 aaPredicted RBP8.32□□□□□ -1.08
BRCC3-208ENST00000453705 PIAS2O75928 621 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 URI1O94763 535 aaPredicted RBP8.32□□□□□ -1.08
BRCC3-208ENST00000453705 ZNF202O95125 648 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 NPPAP01160 153 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 JMJD7P0C870 316 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 CPEP16870 476 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 TRIM21P19474 475 aaKnown RBP8.32□□□□□ -1.08
BRCC3-208ENST00000453705 HOXD13P35453 343 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 NDUFA8P51970 172 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 PPP5CP53041 499 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 GUCY1B3Q02153 619 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 BMPR2Q13873 1038 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 TBC1D25Q3MII6 688 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 ARL13BQ3SXY8 428 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 BOLA3Q53S33 107 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 CDC42EP5Q6NZY7 148 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 INTS8Q75QN2 995 aaKnown RBP8.32□□□□□ -1.08
BRCC3-208ENST00000453705 OVCH2Q7RTZ1 564 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 LRRC49Q8IUZ0 686 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 LIX1LQ8IVB5 337 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 SPC24Q8NBT2 197 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 ACSF2Q96CM8 615 aaPredicted RBP8.32□□□□□ -1.08
BRCC3-208ENST00000453705 ZBED3Q96IU2 234 aaPredicted RBP8.32□□□□□ -1.08
BRCC3-208ENST00000453705 TTC25Q96NG3 672 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 FERD3LQ96RJ6 166 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 OSBPL10Q9BXB5 764 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 MKNK2Q9HBH9 465 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 CBX8Q9HC52 389 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 TCF7L1Q9HCS4 588 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 ARFGAP3Q9NP61 516 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 MTMR4Q9NYA4 1195 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 NYAP2Q9P242 653 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 DOCK1Q14185 1865 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 MYH7BA7E2Y1 1941 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 GOLGA6L10A0A0M3HER8 536 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 RIMBP2O15034 1052 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 TXNL1O43396 289 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 GREM1O60565 184 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 VIMP08670 466 aaKnown RBP8.32□□□□□ -1.08
BRCC3-208ENST00000453705 SHMT1P34896 483 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 TIE1P35590 1138 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 ERVK-21P61565 698 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 SLC35G1Q2M3R5 365 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 INAVAQ3KP66 663 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 GPR139Q6DWJ6 353 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 OLFM4Q6UX06 510 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 DENND5BQ6ZUT9 1274 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 DGLUCYQ7Z3D6 616 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 FOXP4Q8IVH2 680 aaPredicted RBP8.32□□□□□ -1.08
BRCC3-208ENST00000453705 FAM178BQ8IXR5 827 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 C4orf32Q8N8J7 132 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 FTOQ9C0B1 505 aaKnown RBP eCLIP8.32□□□□□ -1.08
BRCC3-208ENST00000453705 NAT10Q9H0A0 1025 aaKnown RBP8.32□□□□□ -1.08
BRCC3-208ENST00000453705 WNT5BQ9H1J7 359 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 TOMM22Q9NS69 142 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 KCND1Q9NSA2 647 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 STK39Q9UEW8 545 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 PCOLCE2Q9UKZ9 415 aa8.32□□□□□ -1.08
BRCC3-208ENST00000453705 CEP350Q5VT06 3117 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 ECE2O60344 883 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 HLA-DOAP06340 250 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 PORP16435 677 aaPredicted RBP8.31□□□□□ -1.08
BRCC3-208ENST00000453705 RXRAP19793 462 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 ASMTP46597 345 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 SCNN1BP51168 640 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 SLC26A5P58743 744 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 ICA1Q05084 483 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 RCN1Q15293 331 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 CLPPQ16740 277 aaPredicted RBP8.31□□□□□ -1.08
BRCC3-208ENST00000453705 TIGD6Q17RP2 521 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 MAPKAPK5Q8IW41 473 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 C7orf31Q8N865 590 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 GBP7Q8N8V2 638 aaPredicted RBP8.31□□□□□ -1.08
BRCC3-208ENST00000453705 ATG16L2Q8NAA4 619 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 DCAF4Q8WV16 495 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 SLC10A4Q96EP9 437 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 EPSTI1Q96J88 318 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 PPP1R13BQ96KQ4 1090 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 AK8Q96MA6 479 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 CMTM3Q96MX0 182 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 DACH2Q96NX9 599 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 LSM14BQ9BX40 385 aaKnown RBP8.31□□□□□ -1.08
BRCC3-208ENST00000453705 FOXP3Q9BZS1 431 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 ADAM19Q9H013 955 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 MAGEF1Q9HAY2 307 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 POLMQ9NP87 494 aaPredicted RBP8.31□□□□□ -1.08
BRCC3-208ENST00000453705 H2AFYO75367 372 aaKnown RBP8.31□□□□□ -1.08
BRCC3-208ENST00000453705 SOD2P04179 222 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms