RNA–Protein interactions for RNA: ENST00000443528.5

ACTB-206, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 569 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-206ENST00000443528 CEP135Q66GS9 1140 aa16.94■□□□□ 0.3
ACTB-206ENST00000443528 OVOS1Q6IE37 1185 aa16.94■□□□□ 0.3
ACTB-206ENST00000443528 CENPPQ6IPU0 288 aa16.94■□□□□ 0.3
ACTB-206ENST00000443528 ELMSAN1Q6PJG2 1045 aa16.94■□□□□ 0.3
ACTB-206ENST00000443528 C15orf39Q6ZRI6 1047 aa16.94■□□□□ 0.3
ACTB-206ENST00000443528 USP37Q86T82 979 aa16.94■□□□□ 0.3
ACTB-206ENST00000443528 ADSSL1Q8N142 457 aa16.94■□□□□ 0.3
ACTB-206ENST00000443528 ZNF461Q8TAF7 563 aa16.94■□□□□ 0.3
ACTB-206ENST00000443528 RIPOR3Q96MK2 946 aa16.94■□□□□ 0.3
ACTB-206ENST00000443528 PHF7Q9BWX1 381 aaPredicted RBP16.94■□□□□ 0.3
ACTB-206ENST00000443528 LMBRD1Q9NUN5 540 aa16.94■□□□□ 0.3
ACTB-206ENST00000443528 ZDHHC7Q9NXF8 308 aa16.94■□□□□ 0.3
ACTB-206ENST00000443528 TTC28Q96AY4 2481 aa16.94■□□□□ 0.3
ACTB-206ENST00000443528 C8AP07357 584 aa16.93■□□□□ 0.3
ACTB-206ENST00000443528 CD44P16070 742 aaKnown RBP16.93■□□□□ 0.3
ACTB-206ENST00000443528 PMS1P54277 932 aaKnown RBP16.93■□□□□ 0.3
ACTB-206ENST00000443528 DLG4P78352 724 aa16.93■□□□□ 0.3
ACTB-206ENST00000443528 BFSP1Q12934 665 aa16.93■□□□□ 0.3
ACTB-206ENST00000443528 ADAM9Q13443 819 aa16.93■□□□□ 0.3
ACTB-206ENST00000443528 MORC3Q14149 939 aa16.93■□□□□ 0.3
ACTB-206ENST00000443528 CAMK4Q16566 473 aa16.93■□□□□ 0.3
ACTB-206ENST00000443528 EDRF1Q3B7T1 1238 aa16.93■□□□□ 0.3
ACTB-206ENST00000443528 ATAT1Q5SQI0 421 aa16.93■□□□□ 0.3
ACTB-206ENST00000443528 WSCD1Q658N2 575 aa16.93■□□□□ 0.3
ACTB-206ENST00000443528 NECTIN4Q96NY8 510 aa16.93■□□□□ 0.3
ACTB-206ENST00000443528 TMEM209Q96SK2 561 aa16.93■□□□□ 0.3
ACTB-206ENST00000443528 RTP3Q9BQQ7 232 aa16.93■□□□□ 0.3
ACTB-206ENST00000443528 RHOBTB2Q9BYZ6 727 aa16.93■□□□□ 0.3
ACTB-206ENST00000443528 GTPBP4Q9BZE4 634 aaKnown RBP16.93■□□□□ 0.3
ACTB-206ENST00000443528 GDAP2Q9NXN4 497 aa16.93■□□□□ 0.3
ACTB-206ENST00000443528 FRMD4BQ9Y2L6 1034 aa16.93■□□□□ 0.3
ACTB-206ENST00000443528 ARHGEF37A1IGU5 675 aa16.92■□□□□ 0.3
ACTB-206ENST00000443528 OR6C75A6NL08 312 aa16.92■□□□□ 0.3
ACTB-206ENST00000443528 LOC730098B7Z3J9 87 aa16.92■□□□□ 0.3
ACTB-206ENST00000443528 MAPK13O15264 365 aa16.92■□□□□ 0.3
ACTB-206ENST00000443528 OR4Q2P0C623 313 aa16.92■□□□□ 0.3
ACTB-206ENST00000443528 ATF2P15336 505 aa16.92■□□□□ 0.3
ACTB-206ENST00000443528 C1orf220Q5T0J3 134 aa16.92■□□□□ 0.3
ACTB-206ENST00000443528 LIN9Q5TKA1 542 aa16.92■□□□□ 0.3
ACTB-206ENST00000443528 TPGS2Q68CL5 300 aa16.92■□□□□ 0.3
ACTB-206ENST00000443528 ANKRD40Q6AI12 368 aa16.92■□□□□ 0.3
ACTB-206ENST00000443528 CYP26C1Q6V0L0 522 aa16.92■□□□□ 0.3
ACTB-206ENST00000443528 RNF19BQ6ZMZ0 732 aa16.92■□□□□ 0.3
ACTB-206ENST00000443528 GJD3Q8N144 294 aa16.92■□□□□ 0.3
ACTB-206ENST00000443528 SLC7A14Q8TBB6 771 aa16.92■□□□□ 0.3
ACTB-206ENST00000443528 TMC2Q8TDI7 906 aa16.92■□□□□ 0.3
ACTB-206ENST00000443528 OXCT2Q9BYC2 517 aaPredicted RBP16.92■□□□□ 0.3
ACTB-206ENST00000443528 PRKD2Q9BZL6 878 aa16.92■□□□□ 0.3
ACTB-206ENST00000443528 DSEQ9UL01 958 aa16.92■□□□□ 0.3
ACTB-206ENST00000443528 L1RE1Q9UN81 338 aa16.92■□□□□ 0.3
ACTB-206ENST00000443528 BDP1A6H8Y1 2624 aa16.92■□□□□ 0.3
ACTB-206ENST00000443528 TSC2P49815 1807 aa16.91■□□□□ 0.3
ACTB-206ENST00000443528 TNFRSF10AO00220 468 aa16.91■□□□□ 0.3
ACTB-206ENST00000443528 BIN1O00499 593 aa16.91■□□□□ 0.3
ACTB-206ENST00000443528 SEC24AO95486 1093 aa16.91■□□□□ 0.3
ACTB-206ENST00000443528 VNN2O95498 520 aa16.91■□□□□ 0.3
ACTB-206ENST00000443528 C4BPAP04003 597 aaKnown RBP16.91■□□□□ 0.3
ACTB-206ENST00000443528 CPB1P15086 417 aa16.91■□□□□ 0.3
ACTB-206ENST00000443528 RPL13P26373 211 aaKnown RBP16.91■□□□□ 0.3
ACTB-206ENST00000443528 HOXA9P31269 272 aa16.91■□□□□ 0.3
ACTB-206ENST00000443528 UVSSAQ2YD98 709 aa16.91■□□□□ 0.3
ACTB-206ENST00000443528 PPM1LQ5SGD2 360 aa16.91■□□□□ 0.3
ACTB-206ENST00000443528 TDRD10Q5VZ19 366 aaKnown RBP16.91■□□□□ 0.3
ACTB-206ENST00000443528 LIMS2Q7Z4I7 341 aa16.91■□□□□ 0.3
ACTB-206ENST00000443528 PDCL2Q8N4E4 241 aa16.91■□□□□ 0.3
ACTB-206ENST00000443528 OR10T2Q8NGX3 314 aa16.91■□□□□ 0.3
ACTB-206ENST00000443528 SMG7Q92540 1137 aaKnown RBP16.91■□□□□ 0.3
ACTB-206ENST00000443528 EEF2KMTQ96G04 330 aa16.91■□□□□ 0.3
ACTB-206ENST00000443528 HPDLQ96IR7 371 aa16.91■□□□□ 0.3
ACTB-206ENST00000443528 RPGRIP1Q96KN7 1286 aa16.91■□□□□ 0.3
ACTB-206ENST00000443528 KIAA1468Q9P260 1216 aa16.91■□□□□ 0.3
ACTB-206ENST00000443528 AFF4Q9UHB7 1163 aaKnown RBP16.91■□□□□ 0.3
ACTB-206ENST00000443528 SNX9Q9Y5X1 595 aa16.91■□□□□ 0.3
ACTB-206ENST00000443528 MTCL1Q9Y4B5 1905 aaKnown RBP16.91■□□□□ 0.3
ACTB-206ENST00000443528 TRIM49BA6NDI0 452 aa16.9■□□□□ 0.3
ACTB-206ENST00000443528 PPP1R3GB7ZBB8 358 aa16.9■□□□□ 0.3
ACTB-206ENST00000443528 HNRNPA1P09651 372 aaKnown RBP eCLIP16.9■□□□□ 0.3
ACTB-206ENST00000443528 CCNE1P24864 410 aa16.9■□□□□ 0.3
ACTB-206ENST00000443528 SSTR3P32745 418 aaPredicted RBP16.9■□□□□ 0.3
ACTB-206ENST00000443528 PSMC2P35998 433 aaKnown RBP16.9■□□□□ 0.3
ACTB-206ENST00000443528 VAMP7P51809 220 aa16.9■□□□□ 0.3
ACTB-206ENST00000443528 MCCD1P59942 119 aaPredicted RBP16.9■□□□□ 0.3
ACTB-206ENST00000443528 ADCY1Q08828 1119 aa16.9■□□□□ 0.3
ACTB-206ENST00000443528 MYO1EQ12965 1108 aa16.9■□□□□ 0.3
ACTB-206ENST00000443528 GPR17Q13304 367 aa16.9■□□□□ 0.3
ACTB-206ENST00000443528 SOWAHAQ2M3V2 549 aa16.9■□□□□ 0.3
ACTB-206ENST00000443528 CCDC149Q6ZUS6 474 aa16.9■□□□□ 0.3
ACTB-206ENST00000443528 RTL10Q7L3V2 364 aa16.9■□□□□ 0.3
ACTB-206ENST00000443528 METTL23Q86XA0 190 aa16.9■□□□□ 0.3
ACTB-206ENST00000443528 ZC3H3Q8IXZ2 948 aaKnown RBP16.9■□□□□ 0.3
ACTB-206ENST00000443528 FAM186BQ8IYM0 893 aa16.9■□□□□ 0.3
ACTB-206ENST00000443528 TCEAL8Q8IYN2 117 aa16.9■□□□□ 0.3
ACTB-206ENST00000443528 KHSRPQ92945 711 aaKnown RBP eCLIP16.9■□□□□ 0.3
ACTB-206ENST00000443528 GBP4Q96PP9 640 aa16.9■□□□□ 0.3
ACTB-206ENST00000443528 R3HCC1Q9Y3T6 440 aaKnown RBP16.9■□□□□ 0.3
ACTB-206ENST00000443528 MUC3AQ02505 3323 aa16.9■□□□□ 0.3
ACTB-206ENST00000443528 CCL16O15467 120 aa16.89■□□□□ 0.29
ACTB-206ENST00000443528 HUS1O60921 280 aa16.89■□□□□ 0.29
ACTB-206ENST00000443528 VNN1O95497 513 aa16.89■□□□□ 0.29
ACTB-206ENST00000443528 SP100P23497 879 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms