RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 NECTIN3Q9NQS3 549 aa5.85□□□□□ -1.47
HMGB3P10-201ENST00000434734 PRDM8Q9NQV8 689 aa5.85□□□□□ -1.47
HMGB3P10-201ENST00000434734 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P10-201ENST00000434734 CHORDC1Q9UHD1 332 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P10-201ENST00000434734 PRSS50Q9UI38 385 aa5.85□□□□□ -1.47
HMGB3P10-201ENST00000434734 RASAL2Q9UJF2 1139 aa5.85□□□□□ -1.47
HMGB3P10-201ENST00000434734 NUMBLQ9Y6R0 609 aa5.85□□□□□ -1.47
HMGB3P10-201ENST00000434734 TRIM43BA6NCK2 446 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 SH2B2O14492 632 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 USP1O94782 785 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 GUCA1CO95843 209 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 GSTM1P09488 218 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 NOS3P29474 1203 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 MSH2P43246 934 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 AARSP49588 968 aaKnown RBP eCLIP5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 MCM2P49736 904 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 ARFIP2P53365 341 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 EVCP57679 992 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 RPL11P62913 178 aaKnown RBP5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 SPIRE1Q08AE8 756 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 SLMAPQ14BN4 828 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 GLIPR1L2Q4G1C9 344 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 SLFN11Q7Z7L1 901 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 VSIG10LQ86VR7 867 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 MICU3Q86XE3 530 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 CCDC117Q8IWD4 279 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 RHOT1Q8IXI2 618 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 RBM12BQ8IXT5 1001 aaKnown RBP5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 LZTR1Q8N653 840 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 CHST13Q8NET6 341 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 FATE1Q969F0 183 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 TP53INP1Q96A56 240 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 TRIM43Q96BQ3 446 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 Q96M66 194 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 NOX5Q96PH1 765 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 C7orf25Q9BPX7 421 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 REEP2Q9BRK0 252 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 ADI1Q9BV57 179 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 HDAC8Q9BY41 377 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 WNT8AQ9H1J5 351 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 NDST4Q9H3R1 872 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 DECR2Q9NUI1 292 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 TBC1D23Q9NUY8 699 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 C5AR2Q9P296 337 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 HSF4Q9ULV5 492 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 AGTPBP1Q9UPW5 1226 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 CAMK2AQ9UQM7 478 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 NAALADL1Q9UQQ1 740 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 TMEM5Q9Y2B1 443 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 PSAT1Q9Y617 370 aa5.84□□□□□ -1.47
HMGB3P10-201ENST00000434734 C7orf72A4D263 438 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 FAM90A27PA6NNH2 459 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 PTGES3LE9PB15 166 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 PLOD2O00469 737 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 FYB1O15117 783 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 ADAM20O43506 726 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 BUB1BO60566 1050 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 SLC22A3O75751 556 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 C4BPAP04003 597 aaKnown RBP5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 PRKCBP05771 671 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 MMEP08473 750 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 ADH5P11766 374 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 LAMP2P13473 410 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 VAV1P15498 845 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 SYN1P17600 705 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 SDHAP31040 664 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 TLX1P31314 330 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 DEKP35659 375 aaKnown RBP5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 GGT5P36269 586 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 CARSP49589 748 aaKnown RBP5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 LIMK1P53667 647 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 TPD52P55327 224 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 RBP5P82980 135 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 STK4Q13043 487 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 TARDBPQ13148 414 aaKnown RBP eCLIP5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 KCNB1Q14721 858 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 NOMO1Q15155 1222 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 BMP2KLQ5H9B9 411 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 MUM1L1Q5H9M0 696 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 KHDC1LQ5JSQ8 128 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 EXOSC6Q5RKV6 272 aaKnown RBP5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 CC2D1BQ5T0F9 858 aaKnown RBP5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 ABRAXAS1Q6UWZ7 409 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 Q6ZS46 218 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 EP400NLQ6ZTU2 488 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 RNF44Q7L0R7 432 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 ZNF804AQ7Z570 1209 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 SLC51AQ86UW1 340 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 GATAD2AQ86YP4 633 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 SLC44A2Q8IWA5 706 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 RPAP2Q8IXW5 612 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 DIS3L2Q8IYB7 885 aaKnown RBP5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 LRRC71Q8N4P6 559 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 USP6NLQ92738 828 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 FOXRED1Q96CU9 486 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 TCTN2Q96GX1 697 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 SUCLG2Q96I99 432 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 MAML3Q96JK9 1138 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 TUBGCP5Q96RT8 1024 aa5.83□□□□□ -1.48
HMGB3P10-201ENST00000434734 TWSG1Q9GZX9 223 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms