RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 ZNF516Q92618 1163 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 FGF13Q92913 245 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 ACSF2Q96CM8 615 aaPredicted RBP13.78□□□□□ -0.2
GPC1-204ENST00000426280 TSPAN18Q96SJ8 248 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 LRRC27Q9C0I9 530 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 TMEM206Q9H813 350 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 AGPAT3Q9NRZ7 376 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 RBAKQ9NYW8 714 aaPredicted RBP13.78□□□□□ -0.2
GPC1-204ENST00000426280 HSPBP1Q9NZL4 362 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 AGAP1Q9UPQ3 857 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 INSL5Q9Y5Q6 135 aa13.78□□□□□ -0.2
GPC1-204ENST00000426280 PVALEFA0A1B0GWK0 134 aa13.77□□□□□ -0.21
GPC1-204ENST00000426280 ANHXE9PGG2 379 aa13.77□□□□□ -0.21
GPC1-204ENST00000426280 CYB561D2O14569 222 aa13.77□□□□□ -0.21
GPC1-204ENST00000426280 XPOTO43592 962 aaKnown RBP13.77□□□□□ -0.21
GPC1-204ENST00000426280 IL18RAPO95256 599 aa13.77□□□□□ -0.21
GPC1-204ENST00000426280 ITGB3P05106 788 aa13.77□□□□□ -0.21
GPC1-204ENST00000426280 GJA1P17302 382 aa13.77□□□□□ -0.21
GPC1-204ENST00000426280 TYMPP19971 482 aa13.77□□□□□ -0.21
GPC1-204ENST00000426280 POLR2BP30876 1174 aaKnown RBP13.77□□□□□ -0.21
GPC1-204ENST00000426280 PRSS36Q5K4E3 855 aa13.77□□□□□ -0.21
GPC1-204ENST00000426280 OVOS1Q6IE37 1185 aa13.77□□□□□ -0.21
GPC1-204ENST00000426280 OSTM1Q86WC4 334 aa13.77□□□□□ -0.21
GPC1-204ENST00000426280 FSIP1Q8NA03 581 aa13.77□□□□□ -0.21
GPC1-204ENST00000426280 FGF14Q92915 247 aa13.77□□□□□ -0.21
GPC1-204ENST00000426280 MCRS1Q96EZ8 462 aa13.77□□□□□ -0.21
GPC1-204ENST00000426280 PYM1Q9BRP8 204 aaKnown RBP13.77□□□□□ -0.21
GPC1-204ENST00000426280 PLA2G2FQ9BZM2 168 aa13.77□□□□□ -0.21
GPC1-204ENST00000426280 DNAJC25Q9H1X3 360 aa13.77□□□□□ -0.21
GPC1-204ENST00000426280 TMLHEQ9NVH6 421 aa13.77□□□□□ -0.21
GPC1-204ENST00000426280 COL4A3Q01955 1670 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 KPNA7A9QM74 516 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 PRRG1O14668 218 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 EIF3DO15371 548 aaKnown RBP eCLIP13.76□□□□□ -0.21
GPC1-204ENST00000426280 GADD45BO75293 160 aaPredicted RBP13.76□□□□□ -0.21
GPC1-204ENST00000426280 LDHAP00338 332 aaKnown RBP13.76□□□□□ -0.21
GPC1-204ENST00000426280 CST3P01034 146 aaPredicted RBP13.76□□□□□ -0.21
GPC1-204ENST00000426280 CYP11A1P05108 521 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 RHOP08100 348 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 CPB1P15086 417 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 NPR3P17342 541 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 CEBPBP17676 345 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 TWF1Q12792 350 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 DUSP4Q13115 394 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 GPR17Q13304 367 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 TDGQ13569 410 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 MTMR3Q13615 1198 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 HTR4Q13639 388 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 BMT2Q1RMZ1 405 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 TPGS2Q68CL5 300 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 CENPPQ6IPU0 288 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 ELMSAN1Q6PJG2 1045 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 NPAS3Q8IXF0 933 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 CSGALNACT2Q8N6G5 542 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 ELMO3Q96BJ8 720 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 ZSWIM3Q96MP5 696 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 CORO1BQ9BR76 489 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 LRRC3Q9BY71 257 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 MTMR12Q9C0I1 747 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 MAGEF1Q9HAY2 307 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 INTS13Q9NVM9 706 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 AFF4Q9UHB7 1163 aaKnown RBP13.76□□□□□ -0.21
GPC1-204ENST00000426280 NUMBLQ9Y6R0 609 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 DOCK8Q8NF50 2099 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 TSC2P49815 1807 aa13.76□□□□□ -0.21
GPC1-204ENST00000426280 A0A1W2PQ27 194 aa13.75□□□□□ -0.21
GPC1-204ENST00000426280 A0A1W2PQ64 194 aa13.75□□□□□ -0.21
GPC1-204ENST00000426280 A0A1W2PQD8 194 aa13.75□□□□□ -0.21
GPC1-204ENST00000426280 MTMR11A4FU01 709 aa13.75□□□□□ -0.21
GPC1-204ENST00000426280 PI15O43692 258 aa13.75□□□□□ -0.21
GPC1-204ENST00000426280 POU2F2P09086 479 aa13.75□□□□□ -0.21
GPC1-204ENST00000426280 PTPN2P17706 415 aa13.75□□□□□ -0.21
GPC1-204ENST00000426280 ELF1P32519 619 aa13.75□□□□□ -0.21
GPC1-204ENST00000426280 SYKP43405 635 aa13.75□□□□□ -0.21
GPC1-204ENST00000426280 CASP4P49662 377 aa13.75□□□□□ -0.21
GPC1-204ENST00000426280 TAF6P49848 677 aa13.75□□□□□ -0.21
GPC1-204ENST00000426280 CYP2J2P51589 502 aa13.75□□□□□ -0.21
GPC1-204ENST00000426280 PABPC1LQ4VXU2 614 aaKnown RBP13.75□□□□□ -0.21
GPC1-204ENST00000426280 KRBA2Q6ZNG9 492 aa13.75□□□□□ -0.21
GPC1-204ENST00000426280 USP37Q86T82 979 aa13.75□□□□□ -0.21
GPC1-204ENST00000426280 GPIHBP1Q8IV16 184 aa13.75□□□□□ -0.21
GPC1-204ENST00000426280 CEP57L1Q8IYX8 460 aa13.75□□□□□ -0.21
GPC1-204ENST00000426280 FBXL6Q8N531 539 aa13.75□□□□□ -0.21
GPC1-204ENST00000426280 ZCWPW1Q9H0M4 648 aa13.75□□□□□ -0.21
GPC1-204ENST00000426280 CDH7Q9ULB5 785 aa13.75□□□□□ -0.21
GPC1-204ENST00000426280 L1RE1Q9UN81 338 aa13.75□□□□□ -0.21
GPC1-204ENST00000426280 NME7Q9Y5B8 376 aa13.75□□□□□ -0.21
GPC1-204ENST00000426280 KRBA1A5PL33 1030 aa13.74□□□□□ -0.21
GPC1-204ENST00000426280 ZNF233A6NK53 670 aa13.74□□□□□ -0.21
GPC1-204ENST00000426280 OR6C75A6NL08 312 aa13.74□□□□□ -0.21
GPC1-204ENST00000426280 XYLBO75191 536 aa13.74□□□□□ -0.21
GPC1-204ENST00000426280 LRG1P02750 347 aa13.74□□□□□ -0.21
GPC1-204ENST00000426280 CFHP08603 1231 aa13.74□□□□□ -0.21
GPC1-204ENST00000426280 ODC1P11926 461 aa13.74□□□□□ -0.21
GPC1-204ENST00000426280 DPYDQ12882 1025 aa13.74□□□□□ -0.21
GPC1-204ENST00000426280 KNOP1Q1ED39 458 aaKnown RBP13.74□□□□□ -0.21
GPC1-204ENST00000426280 NT5DC4Q86YG4 428 aa13.74□□□□□ -0.21
GPC1-204ENST00000426280 UBALD2Q8IYN6 164 aa13.74□□□□□ -0.21
GPC1-204ENST00000426280 PDCL2Q8N4E4 241 aa13.74□□□□□ -0.21
GPC1-204ENST00000426280 TMEM105Q8N8V8 129 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms