RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 SMG5Q9UPR3 1016 aaKnown RBP17.56■□□□□ 0.4
PKP4-204ENST00000421462 ACTL7BQ9Y614 415 aa17.56■□□□□ 0.4
PKP4-204ENST00000421462 MAGEA13PA6NCF6 341 aa17.56■□□□□ 0.4
PKP4-204ENST00000421462 PIK3CDO00329 1044 aa17.56■□□□□ 0.4
PKP4-204ENST00000421462 MAGEB2O15479 319 aa17.56■□□□□ 0.4
PKP4-204ENST00000421462 MAN1A1P33908 653 aa17.56■□□□□ 0.4
PKP4-204ENST00000421462 MCL1Q07820 350 aa17.56■□□□□ 0.4
PKP4-204ENST00000421462 CTC1Q2NKJ3 1217 aa17.56■□□□□ 0.4
PKP4-204ENST00000421462 PADI6Q6TGC4 694 aa17.56■□□□□ 0.4
PKP4-204ENST00000421462 ALYREFQ86V81 257 aaKnown RBP17.56■□□□□ 0.4
PKP4-204ENST00000421462 POMGNT1Q8WZA1 660 aa17.56■□□□□ 0.4
PKP4-204ENST00000421462 TUBGCP5Q96RT8 1024 aa17.56■□□□□ 0.4
PKP4-204ENST00000421462 ZNF184Q99676 751 aaPredicted RBP17.56■□□□□ 0.4
PKP4-204ENST00000421462 TSSK1BQ9BXA7 367 aa17.56■□□□□ 0.4
PKP4-204ENST00000421462 SYNCQ9H7C4 482 aa17.56■□□□□ 0.4
PKP4-204ENST00000421462 MANSC1Q9H8J5 431 aa17.56■□□□□ 0.4
PKP4-204ENST00000421462 KRT82Q9NSB4 513 aa17.56■□□□□ 0.4
PKP4-204ENST00000421462 EURLQ9NYK6 297 aa17.56■□□□□ 0.4
PKP4-204ENST00000421462 MROH7Q68CQ1 1323 aa17.56■□□□□ 0.4
PKP4-204ENST00000421462 F5H6K3 240 aa17.56■□□□□ 0.4
PKP4-204ENST00000421462 SGK1O00141 431 aa17.56■□□□□ 0.4
PKP4-204ENST00000421462 HLA-DOAP06340 250 aa17.56■□□□□ 0.4
PKP4-204ENST00000421462 TCF4P15884 667 aa17.56■□□□□ 0.4
PKP4-204ENST00000421462 DAW1Q8N136 415 aa17.56■□□□□ 0.4
PKP4-204ENST00000421462 SLCO2A1Q92959 643 aa17.56■□□□□ 0.4
PKP4-204ENST00000421462 DDX27Q96GQ7 796 aaKnown RBP17.56■□□□□ 0.4
PKP4-204ENST00000421462 NACC1Q96RE7 527 aa17.56■□□□□ 0.4
PKP4-204ENST00000421462 TMEM121Q9BTD3 319 aa17.56■□□□□ 0.4
PKP4-204ENST00000421462 ZBTB12Q9Y330 459 aaPredicted RBP17.56■□□□□ 0.4
PKP4-204ENST00000421462 PCDHAC2Q9Y5I4 1007 aa17.56■□□□□ 0.4
PKP4-204ENST00000421462 OPHN1O60890 802 aa17.55■□□□□ 0.4
PKP4-204ENST00000421462 ARP10275 920 aa17.55■□□□□ 0.4
PKP4-204ENST00000421462 ZCCHC9Q8N567 271 aaKnown RBP17.55■□□□□ 0.4
PKP4-204ENST00000421462 SH3TC2Q8TF17 1288 aa17.55■□□□□ 0.4
PKP4-204ENST00000421462 FAM237BA0A1B0GVD1 139 aa17.55■□□□□ 0.4
PKP4-204ENST00000421462 MTA2O94776 668 aa17.55■□□□□ 0.4
PKP4-204ENST00000421462 CFHP08603 1231 aa17.55■□□□□ 0.4
PKP4-204ENST00000421462 BGNP21810 368 aa17.55■□□□□ 0.4
PKP4-204ENST00000421462 RFX1P22670 979 aa17.55■□□□□ 0.4
PKP4-204ENST00000421462 PEX3P56589 373 aa17.55■□□□□ 0.4
PKP4-204ENST00000421462 TBC1D25Q3MII6 688 aa17.55■□□□□ 0.4
PKP4-204ENST00000421462 FAM182BQ5T319 152 aa17.55■□□□□ 0.4
PKP4-204ENST00000421462 HIPK4Q8NE63 616 aa17.55■□□□□ 0.4
PKP4-204ENST00000421462 CRYGNQ8WXF5 182 aa17.55■□□□□ 0.4
PKP4-204ENST00000421462 ZNF577Q9BSK1 485 aa17.55■□□□□ 0.4
PKP4-204ENST00000421462 THTPAQ9BU02 230 aa17.55■□□□□ 0.4
PKP4-204ENST00000421462 ABLIM1O14639 778 aa17.54■□□□□ 0.4
PKP4-204ENST00000421462 PRPF4O43172 522 aaKnown RBP eCLIP17.54■□□□□ 0.4
PKP4-204ENST00000421462 MYL2P10916 166 aa17.54■□□□□ 0.4
PKP4-204ENST00000421462 MUTP22033 750 aa17.54■□□□□ 0.4
PKP4-204ENST00000421462 SLC5A9Q2M3M2 681 aa17.54■□□□□ 0.4
PKP4-204ENST00000421462 WDR72Q3MJ13 1102 aa17.54■□□□□ 0.4
PKP4-204ENST00000421462 SYDE1Q6ZW31 735 aaPredicted RBP17.54■□□□□ 0.4
PKP4-204ENST00000421462 BBOF1Q8ND07 529 aa17.54■□□□□ 0.4
PKP4-204ENST00000421462 NT5C1BQ96P26 610 aa17.54■□□□□ 0.4
PKP4-204ENST00000421462 FAM111AQ96PZ2 611 aa17.54■□□□□ 0.4
PKP4-204ENST00000421462 UNC45AQ9H3U1 944 aa17.54■□□□□ 0.4
PKP4-204ENST00000421462 STRCP1A6NGW2 1772 aa17.54■□□□□ 0.4
PKP4-204ENST00000421462 CCDC195A0A1B0GUA6 201 aa17.54■□□□□ 0.4
PKP4-204ENST00000421462 LYNP07948 512 aa17.54■□□□□ 0.4
PKP4-204ENST00000421462 NSFP46459 744 aaKnown RBP17.54■□□□□ 0.4
PKP4-204ENST00000421462 DOK7Q18PE1 504 aa17.54■□□□□ 0.4
PKP4-204ENST00000421462 RBM41Q96IZ5 413 aaKnown RBP17.54■□□□□ 0.4
PKP4-204ENST00000421462 PSMC3IPQ9P2W1 217 aaPredicted RBP17.54■□□□□ 0.4
PKP4-204ENST00000421462 NARFQ9UHQ1 456 aa17.54■□□□□ 0.4
PKP4-204ENST00000421462 ZWINTO95229 277 aa17.53■□□□□ 0.4
PKP4-204ENST00000421462 PRELPP51888 382 aa17.53■□□□□ 0.4
PKP4-204ENST00000421462 SHC3Q92529 594 aa17.53■□□□□ 0.4
PKP4-204ENST00000421462 NDNQ99608 321 aa17.53■□□□□ 0.4
PKP4-204ENST00000421462 NMUR2Q9GZQ4 415 aa17.53■□□□□ 0.4
PKP4-204ENST00000421462 GINM1Q9NU53 330 aa17.53■□□□□ 0.4
PKP4-204ENST00000421462 LARSQ9P2J5 1176 aaKnown RBP17.53■□□□□ 0.4
PKP4-204ENST00000421462 POLLQ9UGP5 575 aa17.53■□□□□ 0.4
PKP4-204ENST00000421462 TYROBPO43914 113 aa17.53■□□□□ 0.4
PKP4-204ENST00000421462 RTP1P59025 263 aa17.53■□□□□ 0.4
PKP4-204ENST00000421462 OCRLQ01968 901 aa17.53■□□□□ 0.4
PKP4-204ENST00000421462 AP1B1Q10567 949 aa17.53■□□□□ 0.4
PKP4-204ENST00000421462 CCNG2Q16589 344 aa17.53■□□□□ 0.4
PKP4-204ENST00000421462 BBS9Q3SYG4 887 aa17.53■□□□□ 0.4
PKP4-204ENST00000421462 MOXD1Q6UVY6 613 aa17.53■□□□□ 0.4
PKP4-204ENST00000421462 C3orf62Q6ZUJ4 267 aa17.53■□□□□ 0.4
PKP4-204ENST00000421462 PYROXD1Q8WU10 500 aa17.53■□□□□ 0.4
PKP4-204ENST00000421462 SAR1AQ9NR31 198 aa17.53■□□□□ 0.4
PKP4-204ENST00000421462 PPARGC1AQ9UBK2 798 aaKnown RBP17.53■□□□□ 0.4
PKP4-204ENST00000421462 TXNDC9O14530 226 aa17.53■□□□□ 0.4
PKP4-204ENST00000421462 CYP1A1P04798 512 aaPredicted RBP17.53■□□□□ 0.4
PKP4-204ENST00000421462 CCNFP41002 786 aa17.53■□□□□ 0.4
PKP4-204ENST00000421462 CLEC16AQ2KHT3 1053 aa17.53■□□□□ 0.4
PKP4-204ENST00000421462 CNPY1Q3B7I2 92 aa17.53■□□□□ 0.4
PKP4-204ENST00000421462 MCOLN2Q8IZK6 566 aa17.53■□□□□ 0.4
PKP4-204ENST00000421462 RIBC1Q8N443 379 aaPredicted RBP17.53■□□□□ 0.4
PKP4-204ENST00000421462 DRAXINQ8NBI3 349 aaPredicted RBP17.53■□□□□ 0.4
PKP4-204ENST00000421462 ZNF395Q9H8N7 513 aaPredicted RBP17.53■□□□□ 0.4
PKP4-204ENST00000421462 FCHO1O14526 889 aa17.52■□□□□ 0.4
PKP4-204ENST00000421462 TRAFD1O14545 582 aaPredicted RBP17.52■□□□□ 0.4
PKP4-204ENST00000421462 FOSP01100 380 aaPredicted RBP17.52■□□□□ 0.4
PKP4-204ENST00000421462 ADRA2BP18089 450 aa17.52■□□□□ 0.4
PKP4-204ENST00000421462 ARL4CP56559 192 aa17.52■□□□□ 0.4
PKP4-204ENST00000421462 SNRNP35Q16560 246 aaKnown RBP17.52■□□□□ 0.4
PKP4-204ENST00000421462 HAUS6Q7Z4H7 955 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms