RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 SLC27A1Q6PCB7 646 aa17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 CDK5RAP1Q96SZ6 601 aaKnown RBP17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 TINF2Q9BSI4 451 aa17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 ARHGAP42A6NI28 874 aa17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 ZNF185O15231 689 aa17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 ADCY3O60266 1144 aa17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 TTC4O95801 387 aa17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 LRG1P02750 347 aa17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 KPNA1P52294 538 aaPredicted RBP17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 CYP24A1Q07973 514 aa17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 TMEM134Q9H6X4 195 aa17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 PAK5Q9P286 719 aa17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 PMS2P54278 862 aa17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 BCAT1P54687 386 aa17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 DEFB115Q30KQ5 88 aa17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 FAM133BQ5BKY9 247 aaKnown RBP17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 ZNF280DQ6N043 979 aa17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 MYLK4Q86YV6 388 aaPredicted RBP17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 TRAIPQ9BWF2 469 aa17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 NSMCE4AQ9NXX6 385 aa17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 TRIM10Q9UDY6 481 aa17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 LMO7Q8WWI1 1683 aa17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 MAP3K7O43318 606 aa17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 H2AFXP16104 143 aaPredicted RBP17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 GOLGA7BQ2TAP0 167 aa17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 HNRNPLLQ8WVV9 542 aaKnown RBP17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 ARHGEF26Q96DR7 871 aa17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 ATP6V1G3Q96LB4 118 aa17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 PACSIN2Q9UNF0 486 aaPredicted RBP17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 DDX5P17844 614 aaKnown RBP17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 TRIM68Q6AZZ1 485 aa17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 CCNI2Q6ZMN8 369 aaPredicted RBP17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 GBP7Q8N8V2 638 aaPredicted RBP17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 TSSK1BQ9BXA7 367 aa17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 CPSF2Q9P2I0 782 aaKnown RBP17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 TBK1Q9UHD2 729 aa17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 SLITRK3O94933 977 aa17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 CSPG5O95196 566 aa17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 IZUMO3Q5VZ72 239 aa17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 ZFPM1Q8IX07 1006 aa17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 ATPAF2Q8N5M1 289 aa17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 TSPAN18Q96SJ8 248 aa17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 EPS15L1Q9UBC2 864 aa17.63■□□□□ 0.41
PCDHA13-202ENST00000409494 EEF2KO00418 725 aaKnown RBP17.62■□□□□ 0.41
PCDHA13-202ENST00000409494 PHF2O75151 1096 aa17.62■□□□□ 0.41
PCDHA13-202ENST00000409494 ACSL3O95573 720 aa17.62■□□□□ 0.41
PCDHA13-202ENST00000409494 MMEP08473 750 aa17.62■□□□□ 0.41
PCDHA13-202ENST00000409494 KSR1Q8IVT5 923 aa17.62■□□□□ 0.41
PCDHA13-202ENST00000409494 CPA5Q8WXQ8 436 aa17.62■□□□□ 0.41
PCDHA13-202ENST00000409494 KLRG1Q96E93 195 aa17.62■□□□□ 0.41
PCDHA13-202ENST00000409494 SEPT5Q99719 369 aaPredicted RBP17.62■□□□□ 0.41
PCDHA13-202ENST00000409494 CYP39A1Q9NYL5 469 aa17.62■□□□□ 0.41
PCDHA13-202ENST00000409494 NRCAMQ92823 1304 aa17.62■□□□□ 0.41
PCDHA13-202ENST00000409494 ONECUT3O60422 494 aaPredicted RBP17.62■□□□□ 0.41
PCDHA13-202ENST00000409494 URODP06132 367 aa17.62■□□□□ 0.41
PCDHA13-202ENST00000409494 ETFBP38117 255 aa17.62■□□□□ 0.41
PCDHA13-202ENST00000409494 FSCN1Q16658 493 aaKnown RBP17.62■□□□□ 0.41
PCDHA13-202ENST00000409494 CRLF3Q8IUI8 442 aa17.62■□□□□ 0.41
PCDHA13-202ENST00000409494 SDCCAG3Q96C92 435 aa17.62■□□□□ 0.41
PCDHA13-202ENST00000409494 CARD9Q9H257 536 aa17.62■□□□□ 0.41
PCDHA13-202ENST00000409494 TRPV2Q9Y5S1 764 aa17.62■□□□□ 0.41
PCDHA13-202ENST00000409494 UBIAD1Q9Y5Z9 338 aa17.62■□□□□ 0.41
PCDHA13-202ENST00000409494 GMNCA6NCL1 334 aa17.62■□□□□ 0.41
PCDHA13-202ENST00000409494 LUC7L3O95232 432 aaKnown RBP17.62■□□□□ 0.41
PCDHA13-202ENST00000409494 SLC11A2P49281 568 aa17.62■□□□□ 0.41
PCDHA13-202ENST00000409494 RGS7P49802 495 aa17.62■□□□□ 0.41
PCDHA13-202ENST00000409494 MAGOHP61326 146 aaKnown RBP17.62■□□□□ 0.41
PCDHA13-202ENST00000409494 ZNF211Q13398 564 aaPredicted RBP17.62■□□□□ 0.41
PCDHA13-202ENST00000409494 KIZQ2M2Z5 673 aa17.62■□□□□ 0.41
PCDHA13-202ENST00000409494 ACCSLQ4AC99 568 aa17.62■□□□□ 0.41
PCDHA13-202ENST00000409494 FRA10AC1Q70Z53 315 aa17.62■□□□□ 0.41
PCDHA13-202ENST00000409494 FAM208AQ9UK61 1670 aaKnown RBP17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 A0A087WZ62 844 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 SNX2O60749 519 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 WEE2P0C1S8 567 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 RAB42Q8N4Z0 105 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 SCFD1Q8WVM8 642 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 FDXACB1Q9BRP7 624 aaPredicted RBP17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 VCX3AQ9NNX9 186 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 CACNA1FO60840 1977 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 UNCXA6NJT0 531 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 PPP2R2AP63151 447 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 MAP2K5Q13163 448 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 NCAPHQ15003 741 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 CBWD2Q8IUF1 395 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 NOA1Q8NC60 698 aaKnown RBP17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 PPHLN1Q8NEY8 458 aaKnown RBP17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 PDCD6IPQ8WUM4 868 aaKnown RBP17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 MCEEQ96PE7 176 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 EFHD1Q9BUP0 239 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 SPDYE5A6NIY4 337 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 MAPK13O15264 365 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 E2F4Q16254 413 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 PLPPR4Q7Z2D5 763 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 CAMKK2Q96RR4 588 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 ZBTB18Q99592 522 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 OSBPL8Q9BZF1 889 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 GPRC5CQ9NQ84 441 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms