RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 FASTKD5Q7L8L6 764 aaKnown RBP16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 PHF13Q86YI8 300 aaPredicted RBP16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 IMPG2Q9BZV3 1241 aa16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 NIF3L1Q9GZT8 377 aa16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 MROH8Q9H579 483 aa16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 IFT122Q9HBG6 1241 aa16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 TJP2Q9UDY2 1190 aa16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 GPR25O00155 361 aa16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 ACKR2O00590 384 aa16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 LGALS2P05162 132 aa16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 MYBL1P10243 752 aa16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 INSRRP14616 1297 aa16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 ADORA2AP29274 412 aa16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 SKOR1P84550 965 aa16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 TTLL4Q14679 1199 aa16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 TMEM132AQ24JP5 1023 aa16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 ATP13A4Q4VNC1 1196 aa16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 LDLRAD1Q5T700 205 aa16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 PLEKHA7Q6IQ23 1121 aa16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 LRIG3Q6UXM1 1119 aa16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 MPHOSPH6Q99547 160 aaKnown RBP16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 SMARCAD1Q9H4L7 1026 aa16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 ZSWIM8A7E2V4 1837 aa16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 FSCN2O14926 492 aa16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 VTNP04004 478 aa16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 ADCYAP1R1P41586 468 aa16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 OGDHQ02218 1023 aa16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 ADCY2Q08462 1091 aa16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 TRIP13Q15645 432 aaPredicted RBP16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 ZNF699Q32M78 642 aa16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 SGO2Q562F6 1265 aa16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 KCNV1Q6PIU1 500 aa16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 KDM7AQ6ZMT4 941 aa16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 C12orf50Q8NA57 414 aaPredicted RBP16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 UHMK1Q8TAS1 419 aaKnown RBP16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 RNF25Q96BH1 459 aaPredicted RBP16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 ACSF2Q96CM8 615 aaPredicted RBP16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 CPB2Q96IY4 423 aa16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 NXF1Q9UBU9 619 aaKnown RBP16.13■□□□□ 0.17
SCAMP4-202ENST00000409472 A0A087WZ62 844 aa16.12■□□□□ 0.17
SCAMP4-202ENST00000409472 EIF3HO15372 352 aaKnown RBP eCLIP16.12■□□□□ 0.17
SCAMP4-202ENST00000409472 TLR3O15455 904 aaKnown RBP16.12■□□□□ 0.17
SCAMP4-202ENST00000409472 TMEM191BP0C7N4 346 aa16.12■□□□□ 0.17
SCAMP4-202ENST00000409472 RALAP11233 206 aa16.12■□□□□ 0.17
SCAMP4-202ENST00000409472 FGFR4P22455 802 aa16.12■□□□□ 0.17
SCAMP4-202ENST00000409472 SNAPC2Q13487 334 aa16.12■□□□□ 0.17
SCAMP4-202ENST00000409472 PPP2R5EQ16537 467 aa16.12■□□□□ 0.17
SCAMP4-202ENST00000409472 DUOXA2Q1HG44 320 aa16.12■□□□□ 0.17
SCAMP4-202ENST00000409472 CYP4A22Q5TCH4 519 aa16.12■□□□□ 0.17
SCAMP4-202ENST00000409472 PRUNE1Q86TP1 453 aa16.12■□□□□ 0.17
SCAMP4-202ENST00000409472 WDTC1Q8N5D0 677 aa16.12■□□□□ 0.17
SCAMP4-202ENST00000409472 AFG1LQ8WV93 481 aa16.12■□□□□ 0.17
SCAMP4-202ENST00000409472 KAT2BQ92831 832 aa16.12■□□□□ 0.17
SCAMP4-202ENST00000409472 FDXACB1Q9BRP7 624 aaPredicted RBP16.12■□□□□ 0.17
SCAMP4-202ENST00000409472 HMGXB4Q9UGU5 601 aa16.12■□□□□ 0.17
SCAMP4-202ENST00000409472 SIX4Q9UIU6 781 aa16.12■□□□□ 0.17
SCAMP4-202ENST00000409472 RASAL2Q9UJF2 1139 aa16.12■□□□□ 0.17
SCAMP4-202ENST00000409472 HBP1O60381 514 aa16.12■□□□□ 0.17
SCAMP4-202ENST00000409472 MYZAPP0CAP1 466 aa16.12■□□□□ 0.17
SCAMP4-202ENST00000409472 MMP8P22894 467 aa16.12■□□□□ 0.17
SCAMP4-202ENST00000409472 CDH8P55286 799 aa16.12■□□□□ 0.17
SCAMP4-202ENST00000409472 MAP1SQ66K74 1059 aaPredicted RBP16.12■□□□□ 0.17
SCAMP4-202ENST00000409472 TXNRD3NBQ6F5E7 133 aa16.12■□□□□ 0.17
SCAMP4-202ENST00000409472 ARMC9Q7Z3E5 817 aa16.12■□□□□ 0.17
SCAMP4-202ENST00000409472 CCDC50Q8IVM0 306 aa16.12■□□□□ 0.17
SCAMP4-202ENST00000409472 TRIM11Q96F44 468 aa16.12■□□□□ 0.17
SCAMP4-202ENST00000409472 C2orf40Q9H1Z8 148 aa16.12■□□□□ 0.17
SCAMP4-202ENST00000409472 MTUS1Q9ULD2 1270 aa16.12■□□□□ 0.17
SCAMP4-202ENST00000409472 PI4K2BG5E9Z4 385 aa16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 PDHXO00330 501 aa16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 EBAG9O00559 213 aa16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 GAS2O43903 313 aaKnown RBP16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 KRT19P08727 400 aa16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 SSR1P43307 286 aaKnown RBP16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 LIG3P49916 1009 aa16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 KRT17Q04695 432 aa16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 TRPC3Q13507 836 aa16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 CLUL1Q15846 466 aa16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 AMHR2Q16671 573 aa16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 ZNF792Q3KQV3 632 aa16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 TRIM72Q6ZMU5 477 aa16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 MCEEQ96PE7 176 aa16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 SDCBP2Q9H190 292 aa16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 SEMA4AQ9H3S1 761 aa16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 LRRC19Q9H756 370 aa16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 ERAP1Q9NZ08 941 aa16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 CYTH4Q9UIA0 394 aa16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 PPME1Q9Y570 386 aa16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 ZEB2O60315 1214 aa16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 TMOD1P28289 359 aa16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 C1QBPQ07021 282 aaKnown RBP16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 GRM1Q13255 1194 aa16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 MTMR3Q13615 1198 aa16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 LIN9Q5TKA1 542 aa16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 DPY19L2Q6NUT2 758 aa16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 C1orf127Q8N9H9 656 aa16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 ZC3H15Q8WU90 426 aaKnown RBP16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 TWNKQ96RR1 684 aa16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 KATNBL1Q9H079 304 aa16.11■□□□□ 0.17
SCAMP4-202ENST00000409472 TCRBV5S1A1TA0A578 114 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms