RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 LIG3P49916 1009 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 STRN3Q13033 797 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 OASLQ15646 514 aaKnown RBP16.34■□□□□ 0.21
CPSF7-202ENST00000394888 LONRF1Q17RB8 773 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 DENND2CQ68D51 928 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 GPAT2Q6NUI2 795 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 TSHZ1Q6ZSZ6 1077 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 MOB2Q70IA6 237 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 LRRC71Q8N4P6 559 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 DEPTORQ8TB45 409 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 COPS5Q92905 334 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 HMGXB4Q9UGU5 601 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 PSMC4P43686 418 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 NSFP46459 744 aaKnown RBP16.34■□□□□ 0.21
CPSF7-202ENST00000394888 TRIP13Q15645 432 aaPredicted RBP16.34■□□□□ 0.21
CPSF7-202ENST00000394888 EEF1DP3Q658K8 133 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 CGB2Q6NT52 195 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 ANKRD35Q8N283 1001 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 EXD1Q8NHP7 514 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 SEC16BQ96JE7 1060 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 IFT122Q9HBG6 1241 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 ADAM22Q9P0K1 906 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 PCDHGC3Q9UN70 934 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 IVNS1ABPQ9Y6Y0 642 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 LIASO43766 372 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 TOM1L1O75674 476 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 PTPN7P35236 360 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 SLC25A11Q02978 314 aaKnown RBP16.34■□□□□ 0.21
CPSF7-202ENST00000394888 MBTD1Q05BQ5 628 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 CCNG2Q16589 344 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 CELF3Q5SZQ8 465 aaKnown RBP16.34■□□□□ 0.21
CPSF7-202ENST00000394888 CNPY4Q8N129 248 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 NIPA2Q8N8Q9 360 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 FEZF2Q8TBJ5 459 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 SLC7A3Q8WY07 619 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 CCT6BQ92526 530 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 RUNDC3BQ96NL0 473 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 AGTP01019 485 aa16.33■□□□□ 0.21
CPSF7-202ENST00000394888 KRT10P13645 584 aa16.33■□□□□ 0.21
CPSF7-202ENST00000394888 GBP1P32455 592 aa16.33■□□□□ 0.21
CPSF7-202ENST00000394888 SLCO1A2P46721 670 aa16.33■□□□□ 0.21
CPSF7-202ENST00000394888 TRIM72Q6ZMU5 477 aa16.33■□□□□ 0.21
CPSF7-202ENST00000394888 USP37Q86T82 979 aa16.33■□□□□ 0.21
CPSF7-202ENST00000394888 SNF8Q96H20 258 aa16.33■□□□□ 0.21
CPSF7-202ENST00000394888 TWNKQ96RR1 684 aa16.33■□□□□ 0.21
CPSF7-202ENST00000394888 FNBP1Q96RU3 617 aa16.33■□□□□ 0.21
CPSF7-202ENST00000394888 BCO2Q9BYV7 579 aa16.33■□□□□ 0.21
CPSF7-202ENST00000394888 ASCC2Q9H1I8 757 aaPredicted RBP16.33■□□□□ 0.21
CPSF7-202ENST00000394888 CXCL16Q9H2A7 254 aa16.33■□□□□ 0.21
CPSF7-202ENST00000394888 CISHQ9NSE2 258 aa16.33■□□□□ 0.21
CPSF7-202ENST00000394888 TSC2P49815 1807 aa16.33■□□□□ 0.2
CPSF7-202ENST00000394888 LDHAP00338 332 aaKnown RBP16.33■□□□□ 0.2
CPSF7-202ENST00000394888 ETS1P14921 441 aa16.33■□□□□ 0.2
CPSF7-202ENST00000394888 ITIH2P19823 946 aa16.33■□□□□ 0.2
CPSF7-202ENST00000394888 IL1R2P27930 398 aa16.33■□□□□ 0.2
CPSF7-202ENST00000394888 CCDC38Q502W7 563 aa16.33■□□□□ 0.2
CPSF7-202ENST00000394888 TTC4O95801 387 aa16.33■□□□□ 0.2
CPSF7-202ENST00000394888 TRNP1Q6NT89 227 aa16.33■□□□□ 0.2
CPSF7-202ENST00000394888 MFSD7Q6UXD7 560 aa16.33■□□□□ 0.2
CPSF7-202ENST00000394888 TRMT10CQ7L0Y3 403 aaKnown RBP16.33■□□□□ 0.2
CPSF7-202ENST00000394888 EEPD1Q7L9B9 569 aa16.33■□□□□ 0.2
CPSF7-202ENST00000394888 ZBTB33Q86T24 672 aa16.33■□□□□ 0.2
CPSF7-202ENST00000394888 TRIM11Q96F44 468 aa16.33■□□□□ 0.2
CPSF7-202ENST00000394888 OSBPL8Q9BZF1 889 aa16.33■□□□□ 0.2
CPSF7-202ENST00000394888 PARP2Q9UGN5 583 aa16.33■□□□□ 0.2
CPSF7-202ENST00000394888 DNPEPQ9ULA0 475 aa16.33■□□□□ 0.2
CPSF7-202ENST00000394888 POLIQ9UNA4 740 aa16.33■□□□□ 0.2
CPSF7-202ENST00000394888 ZSCAN5DPP0CG00 497 aa16.32■□□□□ 0.2
CPSF7-202ENST00000394888 TGFB3P10600 412 aa16.32■□□□□ 0.2
CPSF7-202ENST00000394888 TBXAS1P24557 533 aaPredicted RBP16.32■□□□□ 0.2
CPSF7-202ENST00000394888 GJA5P36382 358 aa16.32■□□□□ 0.2
CPSF7-202ENST00000394888 ANKLE1Q8NAG6 615 aa16.32■□□□□ 0.2
CPSF7-202ENST00000394888 PDGFCQ9NRA1 345 aa16.32■□□□□ 0.2
CPSF7-202ENST00000394888 MTUS1Q9ULD2 1270 aa16.32■□□□□ 0.2
CPSF7-202ENST00000394888 HTTP42858 3142 aa16.32■□□□□ 0.2
CPSF7-202ENST00000394888 GOLGA6L10A6NI86 522 aa16.32■□□□□ 0.2
CPSF7-202ENST00000394888 CDKN2BP42772 138 aa16.32■□□□□ 0.2
CPSF7-202ENST00000394888 BPIFB4P59827 614 aa16.32■□□□□ 0.2
CPSF7-202ENST00000394888 SLMAPQ14BN4 828 aa16.32■□□□□ 0.2
CPSF7-202ENST00000394888 PTPN20Q4JDL3 420 aa16.32■□□□□ 0.2
CPSF7-202ENST00000394888 WDR44Q5JSH3 913 aa16.32■□□□□ 0.2
CPSF7-202ENST00000394888 FBXW10Q5XX13 1052 aa16.32■□□□□ 0.2
CPSF7-202ENST00000394888 DENND1BQ6P3S1 775 aa16.32■□□□□ 0.2
CPSF7-202ENST00000394888 DRICH1Q6PGQ1 229 aaPredicted RBP16.32■□□□□ 0.2
CPSF7-202ENST00000394888 RHOT1Q8IXI2 618 aa16.32■□□□□ 0.2
CPSF7-202ENST00000394888 ACSF2Q96CM8 615 aaPredicted RBP16.32■□□□□ 0.2
CPSF7-202ENST00000394888 TLR3O15455 904 aaKnown RBP16.32■□□□□ 0.2
CPSF7-202ENST00000394888 THAP12O43422 761 aa16.32■□□□□ 0.2
CPSF7-202ENST00000394888 SYDE1Q6ZW31 735 aaPredicted RBP16.32■□□□□ 0.2
CPSF7-202ENST00000394888 ARFGAP2Q8N6H7 521 aa16.32■□□□□ 0.2
CPSF7-202ENST00000394888 DNAJC17Q9NVM6 304 aaKnown RBP16.32■□□□□ 0.2
CPSF7-202ENST00000394888 LGALS13Q9UHV8 139 aa16.32■□□□□ 0.2
CPSF7-202ENST00000394888 KCNH4Q9UQ05 1017 aa16.32■□□□□ 0.2
CPSF7-202ENST00000394888 PI4K2BG5E9Z4 385 aa16.31■□□□□ 0.2
CPSF7-202ENST00000394888 GH1P01241 217 aa16.31■□□□□ 0.2
CPSF7-202ENST00000394888 CYP3A5P20815 502 aa16.31■□□□□ 0.2
CPSF7-202ENST00000394888 MARK3P27448 753 aa16.31■□□□□ 0.2
CPSF7-202ENST00000394888 FASTKD3Q14CZ7 662 aaKnown RBP16.31■□□□□ 0.2
CPSF7-202ENST00000394888 RAB6CQ53S08 254 aa16.31■□□□□ 0.2
CPSF7-202ENST00000394888 PLPPR4Q7Z2D5 763 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms