RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 IRX4P78413 519 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 NXNQ6DKJ4 435 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 ACAD10Q6JQN1 1059 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 CCDC62Q6P9F0 684 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 SLC27A1Q6PCB7 646 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 MYLK4Q86YV6 388 aaPredicted RBP13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 FEZF2Q8TBJ5 459 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 SEPT8Q92599 483 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 ACSF2Q96CM8 615 aaPredicted RBP13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 BTBD6Q96KE9 485 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 COL20A1Q9P218 1284 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 AP1G2O75843 785 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 NCAM1P13591 858 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 MNAT1P51948 309 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 SP110Q9HB58 689 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 APOL1O14791 398 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 ODC1P11926 461 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 ARSEP51690 589 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 RPS6KA2Q15349 733 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 PTGISQ16647 500 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 FAM110CQ1W6H9 321 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 ACCSLQ4AC99 568 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 FBXO47Q5MNV8 452 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 ANO5Q75V66 913 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 C4orf32Q8N8J7 132 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 KLHL14Q9P2G3 628 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 PLAAQ9Y263 795 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 PHRF1Q9P1Y6 1649 aaKnown RBP13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 MCF2P10911 925 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 CA4P22748 312 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 GABPB1Q06547 395 aaPredicted RBP13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 RRP1BQ14684 758 aaKnown RBP13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 SPRYD7Q5W111 196 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 ZNF571Q7Z3V5 609 aaPredicted RBP13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 COLEC11Q9BWP8 271 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 OSBPL8Q9BZF1 889 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 SETD1AO15047 1707 aaKnown RBP13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 WDR91A4D1P6 747 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 TMEM88BA6NKF7 163 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 ATP8B1O43520 1251 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 ACADSBP45954 432 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 KCNJ1P48048 391 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 KRT17Q04695 432 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 GKAP1Q5VSY0 366 aaPredicted RBP13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 KDELC2Q7Z4H8 507 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 DEPDC1BQ8WUY9 529 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 IZUMO3Q5VZ72 239 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 RCOR2Q8IZ40 523 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 KIAA0319LQ8IZA0 1049 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.81□□□□□ -0.22e-6■■■■■ 38.1
PTPRN2-202ENST00000389416 AGAP3Q96P47 875 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 PPME1Q9Y570 386 aa13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 COL1A1P02452 1464 aaPredicted RBP13.81□□□□□ -0.2
PTPRN2-202ENST00000389416 CCNE2O96020 404 aa13.8□□□□□ -0.2
PTPRN2-202ENST00000389416 PRKAR2AP13861 404 aaKnown RBP13.8□□□□□ -0.2
PTPRN2-202ENST00000389416 RAG1P15918 1043 aa13.8□□□□□ -0.2
PTPRN2-202ENST00000389416 RRM1P23921 792 aa13.8□□□□□ -0.2
PTPRN2-202ENST00000389416 CDH8P55286 799 aa13.8□□□□□ -0.2
PTPRN2-202ENST00000389416 IL9RQ01113 521 aa13.8□□□□□ -0.2
PTPRN2-202ENST00000389416 ADGRF2Q8IZF7 708 aa13.8□□□□□ -0.2
PTPRN2-202ENST00000389416 CACNA2D3Q8IZS8 1091 aa13.8□□□□□ -0.2
PTPRN2-202ENST00000389416 HES2Q9Y543 173 aa13.8□□□□□ -0.2
PTPRN2-202ENST00000389416 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.8□□□□□ -0.2
PTPRN2-202ENST00000389416 TTI1O43156 1089 aa13.8□□□□□ -0.2
PTPRN2-202ENST00000389416 KRT10P13645 584 aa13.8□□□□□ -0.2
PTPRN2-202ENST00000389416 GPD1P21695 349 aa13.8□□□□□ -0.2
PTPRN2-202ENST00000389416 EIF4BP23588 611 aaKnown RBP13.8□□□□□ -0.2
PTPRN2-202ENST00000389416 MCUR1Q96AQ8 359 aa13.8□□□□□ -0.2
PTPRN2-202ENST00000389416 NUDCD1Q96RS6 583 aa13.8□□□□□ -0.2
PTPRN2-202ENST00000389416 NFASCO94856 1347 aa13.8□□□□□ -0.2
PTPRN2-202ENST00000389416 GTPBP10A4D1E9 387 aaKnown RBP13.8□□□□□ -0.2
PTPRN2-202ENST00000389416 VDRP11473 427 aa13.8□□□□□ -0.2
PTPRN2-202ENST00000389416 CBWD6Q4V339 395 aa13.8□□□□□ -0.2
PTPRN2-202ENST00000389416 CBWD3Q5JTY5 395 aa13.8□□□□□ -0.2
PTPRN2-202ENST00000389416 EFHC1Q5JVL4 640 aa13.8□□□□□ -0.2
PTPRN2-202ENST00000389416 CBWD5Q5RIA9 395 aa13.8□□□□□ -0.2
PTPRN2-202ENST00000389416 CDKL3Q8IVW4 592 aaPredicted RBP13.8□□□□□ -0.2
PTPRN2-202ENST00000389416 BRSK2Q8IWQ3 736 aa13.8□□□□□ -0.2
PTPRN2-202ENST00000389416 ATL2Q8NHH9 583 aa13.8□□□□□ -0.2
PTPRN2-202ENST00000389416 APBA2Q99767 749 aa13.8□□□□□ -0.2
PTPRN2-202ENST00000389416 LACTBL1A8MY62 500 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 KCNN4O15554 427 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 CST8O60676 142 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 ZFXP17010 805 aaPredicted RBP13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 SERPINB6P35237 376 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 PTPN11Q06124 597 aaPredicted RBP13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 PDIA2Q13087 525 aaKnown RBP13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 MTM1Q13496 603 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 ALS2CLQ60I27 953 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 REXO1L1PQ8IX06 675 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 C10orf67Q8IYJ2 551 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 TMEM161BQ8NDZ6 487 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 IFT43Q96FT9 208 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 SLITRK1Q96PX8 696 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 TRIM51Q9BSJ1 452 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 BFARQ9NZS9 450 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 VAV3Q9UKW4 847 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 CAPN6Q9Y6Q1 641 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 NRCAMQ92823 1304 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 FAM187AA6NFU0 413 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms