RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 TIMM13Q9Y5L4 95 aaPredicted RBP5.24□□□□□ -1.57
LTN1-202ENST00000389194 GPR75-ASB3A0A0A6YYF3 556 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 FOXO6A8MYZ6 492 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 C6orf222P0C671 652 aaPredicted RBP5.24□□□□□ -1.57
LTN1-202ENST00000389194 TBXAS1P24557 533 aaPredicted RBP5.24□□□□□ -1.57
LTN1-202ENST00000389194 CDH8P55286 799 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 LBRQ14739 615 aaKnown RBP5.24□□□□□ -1.57
LTN1-202ENST00000389194 CHI3L2Q15782 390 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 CAPRIN2Q6IMN6 1127 aaKnown RBP5.24□□□□□ -1.57
LTN1-202ENST00000389194 KLC3Q6P597 504 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 ACOT1Q86TX2 421 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 BEST2Q8NFU1 509 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 MYCBPAPQ8TBZ2 947 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 ERGIC2Q96RQ1 377 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 NCAPGQ9BPX3 1015 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 VCPKMTQ9H867 229 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 NDE1Q9NXR1 346 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 L3MBTL1Q9Y468 752 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 EML1O00423 815 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 PMPCBO75439 489 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 ZSCAN5DPP0CG00 497 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 CTCFP49711 727 aaPredicted RBP5.24□□□□□ -1.57
LTN1-202ENST00000389194 KIZQ2M2Z5 673 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 KLHL38Q2WGJ6 581 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 SLC10A5Q5PT55 438 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 NDUFAF2Q8N183 169 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 DUSP9Q99956 384 aaKnown RBP5.24□□□□□ -1.57
LTN1-202ENST00000389194 KBTBD4Q9NVX7 518 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 IRAK4Q9NWZ3 460 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 ZNF711Q9Y462 761 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 SCAMP3O14828 347 aaKnown RBP5.24□□□□□ -1.57
LTN1-202ENST00000389194 CPB1P15086 417 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 EEF1DP29692 281 aaKnown RBP5.24□□□□□ -1.57
LTN1-202ENST00000389194 SFNP31947 248 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 GMPSP49915 693 aaPredicted RBP5.24□□□□□ -1.57
LTN1-202ENST00000389194 DLG4P78352 724 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 IL17AQ16552 155 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 ANKRD20A4Q4UJ75 823 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 ANKRD20A8PQ5CZ79 823 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 ANKRD20A2Q5SQ80 823 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 ANKRD20A1Q5TYW2 823 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 PRPF39Q86UA1 669 aaKnown RBP5.24□□□□□ -1.57
LTN1-202ENST00000389194 ARHGEF19Q8IW93 802 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 RNF148Q8N7C7 305 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 TTC25Q96NG3 672 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 ING2Q9H160 280 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 ISCUQ9H1K1 167 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 SP110Q9HB58 689 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 CYP4F12Q9HCS2 524 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 SFMBT1Q9UHJ3 866 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 TBX20Q9UMR3 447 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 ARL2BPQ9Y2Y0 163 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 SPATA31A1Q5TZJ5 1347 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 FAM47DPA6NHR8 397 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 E5RI56 91 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 XPO1O14980 1071 aaKnown RBP5.24□□□□□ -1.57
LTN1-202ENST00000389194 PARNO95453 639 aaKnown RBP5.24□□□□□ -1.57
LTN1-202ENST00000389194 SYF2O95926 243 aaKnown RBP5.24□□□□□ -1.57
LTN1-202ENST00000389194 DPEP1P16444 411 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 VCPP55072 806 aaKnown RBP5.24□□□□□ -1.57
LTN1-202ENST00000389194 TPI1P60174 286 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 RBBP7Q16576 425 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 EFHC2Q5JST6 749 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 STRIP1Q5VSL9 837 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 DENND5BQ6ZUT9 1274 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 OR6J1Q8NGC5 347 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 ATP8B4Q8TF62 1192 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 OTULINQ96BN8 352 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 VPS39Q96JC1 886 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 TASP1Q9H6P5 420 aa5.24□□□□□ -1.57
LTN1-202ENST00000389194 GOLGA8QA0A0J9YX86 632 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 GOLGA8OA6NCC3 632 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 TRIM49D1C9J1S8 452 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 GOLGA8NF8WBI6 632 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 SNX2O60749 519 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 GFAPP14136 432 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 ETS1P14921 441 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 RANBP1P43487 201 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 FXR2P51116 673 aaKnown RBP eCLIP5.23□□□□□ -1.57
LTN1-202ENST00000389194 ESRRGP62508 458 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 PDCD2Q16342 344 aaPredicted RBP5.23□□□□□ -1.57
LTN1-202ENST00000389194 RBM43Q6ZSC3 357 aaKnown RBP5.23□□□□□ -1.57
LTN1-202ENST00000389194 ACAD11Q709F0 780 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 SLC13A5Q86YT5 568 aaPredicted RBP5.23□□□□□ -1.57
LTN1-202ENST00000389194 FBXO16Q8IX29 292 aaPredicted RBP5.23□□□□□ -1.57
LTN1-202ENST00000389194 ZNF280CQ8ND82 737 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 ADAM32Q8TC27 787 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 TMC2Q8TDI7 906 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 ARHGEF26Q96DR7 871 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 DNAJC7Q99615 494 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 RTFDC1Q9BY42 306 aaPredicted RBP5.23□□□□□ -1.57
LTN1-202ENST00000389194 TRPC7Q9HCX4 862 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 C20orf96Q9NUD7 363 aaPredicted RBP5.23□□□□□ -1.57
LTN1-202ENST00000389194 BFARQ9NZS9 450 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 PACSIN3Q9UKS6 424 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 STRIP2Q9ULQ0 834 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 KDM6AO15550 1401 aaPredicted RBP5.23□□□□□ -1.57
LTN1-202ENST00000389194 RIMS1Q86UR5 1692 aaKnown RBP5.23□□□□□ -1.57
LTN1-202ENST00000389194 NCF1BA6NI72 391 aaPredicted RBP5.23□□□□□ -1.57
LTN1-202ENST00000389194 NCF1CA8MVU1 366 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms