RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 NCOA4Q13772 614 aa11.59□□□□□ -0.55
BEST1-201ENST00000378043 P3H1Q32P28 736 aa11.59□□□□□ -0.55
BEST1-201ENST00000378043 FAM133BQ5BKY9 247 aaKnown RBP11.59□□□□□ -0.55
BEST1-201ENST00000378043 TXNRD3NBQ6F5E7 133 aa11.59□□□□□ -0.55
BEST1-201ENST00000378043 SLFN12LQ6IEE8 588 aa11.59□□□□□ -0.55
BEST1-201ENST00000378043 MICALL2Q8IY33 904 aa11.59□□□□□ -0.55
BEST1-201ENST00000378043 GDAP1Q8TB36 358 aa11.59□□□□□ -0.55
BEST1-201ENST00000378043 DEPTORQ8TB45 409 aa11.59□□□□□ -0.55
BEST1-201ENST00000378043 JDP2Q8WYK2 163 aa11.59□□□□□ -0.55
BEST1-201ENST00000378043 WRNIP1Q96S55 665 aa11.59□□□□□ -0.55
BEST1-201ENST00000378043 RBM15Q96T37 977 aaKnown RBP eCLIP11.59□□□□□ -0.55
BEST1-201ENST00000378043 ACAD9Q9H845 621 aa11.59□□□□□ -0.55
BEST1-201ENST00000378043 ZNF302Q9NR11 478 aa11.59□□□□□ -0.55
BEST1-201ENST00000378043 PARVAQ9NVD7 372 aa11.59□□□□□ -0.55
BEST1-201ENST00000378043 USP15Q9Y4E8 981 aaPredicted RBP11.59□□□□□ -0.55
BEST1-201ENST00000378043 LOC285556D6RIA3 1793 aa11.58□□□□□ -0.56
BEST1-201ENST00000378043 LIASO43766 372 aa11.58□□□□□ -0.56
BEST1-201ENST00000378043 FAM189A1O60320 539 aa11.58□□□□□ -0.56
BEST1-201ENST00000378043 CDH16O75309 829 aa11.58□□□□□ -0.56
BEST1-201ENST00000378043 STAM2O75886 525 aa11.58□□□□□ -0.56
BEST1-201ENST00000378043 TBXAS1P24557 533 aaPredicted RBP11.58□□□□□ -0.56
BEST1-201ENST00000378043 GCAP28676 217 aa11.58□□□□□ -0.56
BEST1-201ENST00000378043 ATP5DP30049 168 aa11.58□□□□□ -0.56
BEST1-201ENST00000378043 TNFSF9P41273 254 aa11.58□□□□□ -0.56
BEST1-201ENST00000378043 ADCY1Q08828 1119 aa11.58□□□□□ -0.56
BEST1-201ENST00000378043 GNPTABQ3T906 1256 aa11.58□□□□□ -0.56
BEST1-201ENST00000378043 NUGGCQ68CJ6 796 aa11.58□□□□□ -0.56
BEST1-201ENST00000378043 CGB2Q6NT52 195 aa11.58□□□□□ -0.56
BEST1-201ENST00000378043 MFSD7Q6UXD7 560 aa11.58□□□□□ -0.56
BEST1-201ENST00000378043 SRRM1Q8IYB3 904 aaKnown RBP11.58□□□□□ -0.56
BEST1-201ENST00000378043 ZCCHC9Q8N567 271 aaKnown RBP11.58□□□□□ -0.56
BEST1-201ENST00000378043 SLITRK1Q96PX8 696 aa11.58□□□□□ -0.56
BEST1-201ENST00000378043 PCYT2Q99447 389 aa11.58□□□□□ -0.56
BEST1-201ENST00000378043 NSRP1Q9H0G5 558 aaKnown RBP11.58□□□□□ -0.56
BEST1-201ENST00000378043 SCINQ9Y6U3 715 aa11.58□□□□□ -0.56
BEST1-201ENST00000378043 IVNS1ABPQ9Y6Y0 642 aa11.58□□□□□ -0.56
BEST1-201ENST00000378043 IGKV6D-21A0A0A0MT36 114 aa11.58□□□□□ -0.56
BEST1-201ENST00000378043 F8VP50 259 aa11.58□□□□□ -0.56
BEST1-201ENST00000378043 UBOX5O94941 541 aa11.58□□□□□ -0.56
BEST1-201ENST00000378043 ETS1P14921 441 aa11.58□□□□□ -0.56
BEST1-201ENST00000378043 MAGEA4P43358 317 aa11.58□□□□□ -0.56
BEST1-201ENST00000378043 CNTN2Q02246 1040 aa11.58□□□□□ -0.56
BEST1-201ENST00000378043 SNCBQ16143 134 aa11.58□□□□□ -0.56
BEST1-201ENST00000378043 GALNTL6Q49A17 601 aa11.58□□□□□ -0.56
BEST1-201ENST00000378043 KAZNQ674X7 775 aa11.58□□□□□ -0.56
BEST1-201ENST00000378043 CATSPERGQ6ZRH7 1159 aa11.58□□□□□ -0.56
BEST1-201ENST00000378043 MAML1Q92585 1016 aa11.58□□□□□ -0.56
BEST1-201ENST00000378043 NIFKQ9BYG3 293 aaKnown RBP11.58□□□□□ -0.56
BEST1-201ENST00000378043 KCNG1Q9UIX4 513 aa11.58□□□□□ -0.56
BEST1-201ENST00000378043 NFKBIEO00221 500 aa11.57□□□□□ -0.56
BEST1-201ENST00000378043 PEX10O60683 326 aa11.57□□□□□ -0.56
BEST1-201ENST00000378043 LDHAP00338 332 aaKnown RBP11.57□□□□□ -0.56
BEST1-201ENST00000378043 ASS1P00966 412 aaKnown RBP11.57□□□□□ -0.56
BEST1-201ENST00000378043 HARSP12081 509 aaKnown RBP11.57□□□□□ -0.56
BEST1-201ENST00000378043 GMPSP49915 693 aaPredicted RBP11.57□□□□□ -0.56
BEST1-201ENST00000378043 TGFB2P61812 414 aa11.57□□□□□ -0.56
BEST1-201ENST00000378043 CAPSQ13938 189 aa11.57□□□□□ -0.56
BEST1-201ENST00000378043 FASTKD3Q14CZ7 662 aaKnown RBP11.57□□□□□ -0.56
BEST1-201ENST00000378043 TARBP2Q15633 366 aaKnown RBP11.57□□□□□ -0.56
BEST1-201ENST00000378043 CCDC142Q17RM4 750 aa11.57□□□□□ -0.56
BEST1-201ENST00000378043 CYP4F22Q6NT55 531 aa11.57□□□□□ -0.56
BEST1-201ENST00000378043 WDTC1Q8N5D0 677 aa11.57□□□□□ -0.56
BEST1-201ENST00000378043 BBOF1Q8ND07 529 aa11.57□□□□□ -0.56
BEST1-201ENST00000378043 SLC7A3Q8WY07 619 aa11.57□□□□□ -0.56
BEST1-201ENST00000378043 IP6K2Q9UHH9 426 aa11.57□□□□□ -0.56
BEST1-201ENST00000378043 SPDYE16A6NNV3 312 aaPredicted RBP11.57□□□□□ -0.56
BEST1-201ENST00000378043 ITGBL1O95965 494 aaPredicted RBP11.57□□□□□ -0.56
BEST1-201ENST00000378043 RXRBP28702 533 aa11.57□□□□□ -0.56
BEST1-201ENST00000378043 ICAM3P32942 547 aa11.57□□□□□ -0.56
BEST1-201ENST00000378043 STAT4Q14765 748 aa11.57□□□□□ -0.56
BEST1-201ENST00000378043 WDR72Q3MJ13 1102 aa11.57□□□□□ -0.56
BEST1-201ENST00000378043 GSTA5Q7RTV2 222 aa11.57□□□□□ -0.56
BEST1-201ENST00000378043 RCOR2Q8IZ40 523 aa11.57□□□□□ -0.56
BEST1-201ENST00000378043 ACSF2Q96CM8 615 aaPredicted RBP11.57□□□□□ -0.56
BEST1-201ENST00000378043 AS3MTQ9HBK9 375 aa11.57□□□□□ -0.56
BEST1-201ENST00000378043 PICK1Q9NRD5 415 aa11.57□□□□□ -0.56
BEST1-201ENST00000378043 PRKAG3Q9UGI9 489 aa11.57□□□□□ -0.56
BEST1-201ENST00000378043 GSTTP1A0A1W2PQM5 241 aa11.56□□□□□ -0.56
BEST1-201ENST00000378043 POTEJP0CG39 1038 aa11.56□□□□□ -0.56
BEST1-201ENST00000378043 ATF7P17544 494 aaPredicted RBP11.56□□□□□ -0.56
BEST1-201ENST00000378043 FOXN2P32314 431 aa11.56□□□□□ -0.56
BEST1-201ENST00000378043 WDR4P57081 412 aaKnown RBP11.56□□□□□ -0.56
BEST1-201ENST00000378043 ZKSCAN8Q15776 578 aaPredicted RBP11.56□□□□□ -0.56
BEST1-201ENST00000378043 PPP1R15BQ5SWA1 713 aa11.56□□□□□ -0.56
BEST1-201ENST00000378043 DRICH1Q6PGQ1 229 aaPredicted RBP11.56□□□□□ -0.56
BEST1-201ENST00000378043 MCEEQ96PE7 176 aa11.56□□□□□ -0.56
BEST1-201ENST00000378043 TMEM134Q9H6X4 195 aa11.56□□□□□ -0.56
BEST1-201ENST00000378043 PIM2Q9P1W9 311 aa11.56□□□□□ -0.56
BEST1-201ENST00000378043 DNALI1O14645 258 aaPredicted RBP11.56□□□□□ -0.56
BEST1-201ENST00000378043 ADCY3O60266 1144 aa11.56□□□□□ -0.56
BEST1-201ENST00000378043 ABHD2P08910 425 aa11.56□□□□□ -0.56
BEST1-201ENST00000378043 PECAM1P16284 738 aaPredicted RBP11.56□□□□□ -0.56
BEST1-201ENST00000378043 RPS12P25398 132 aaKnown RBP11.56□□□□□ -0.56
BEST1-201ENST00000378043 BRD2P25440 801 aaKnown RBP11.56□□□□□ -0.56
BEST1-201ENST00000378043 MYL6P60660 151 aa11.56□□□□□ -0.56
BEST1-201ENST00000378043 NCALDP61601 193 aa11.56□□□□□ -0.56
BEST1-201ENST00000378043 MGAT5Q09328 741 aa11.56□□□□□ -0.56
BEST1-201ENST00000378043 OASLQ15646 514 aaKnown RBP11.56□□□□□ -0.56
BEST1-201ENST00000378043 STXBP2Q15833 593 aa11.56□□□□□ -0.56
BEST1-201ENST00000378043 ZNF394Q53GI3 561 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms