RNA–Protein interactions for RNA: ENST00000377080.7

USP11-203, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-203ENST00000377080 FGFR4P22455 802 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 RRM1P23921 792 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 KLRC2P26717 231 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 RFC5P40937 340 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 NAMPTP43490 491 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 KCNJ1P48048 391 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 NOMO3P69849 1222 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 ELF3P78545 371 aaPredicted RBP10.66□□□□□ -0.7
USP11-203ENST00000377080 MAMLD1Q13495 774 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 CUL2Q13617 745 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 NEDD9Q14511 834 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 SURF1Q15526 300 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 MIS18BP1Q6P0N0 1132 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 VSTM1Q6UX27 236 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 ABHD15Q6UXT9 468 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 MOB2Q70IA6 237 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 PCGF5Q86SE9 256 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 NIPA2Q8N8Q9 360 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 CCDC63Q8NA47 563 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 ZSWIM2Q8NEG5 633 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 FEZF2Q8TBJ5 459 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 ZNF516Q92618 1163 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 NKD2Q969F2 451 aaPredicted RBP10.66□□□□□ -0.7
USP11-203ENST00000377080 SAAL1Q96ER3 474 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 OTUD5Q96G74 571 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 FNBP1Q96RU3 617 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 MYCBPQ99417 103 aaPredicted RBP10.66□□□□□ -0.7
USP11-203ENST00000377080 ELAC2Q9BQ52 826 aaKnown RBP10.66□□□□□ -0.7
USP11-203ENST00000377080 TMEM39BQ9GZU3 492 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 AS3MTQ9HBK9 375 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 RXFP1Q9HBX9 757 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 RAVER2Q9HCJ3 691 aaKnown RBP10.66□□□□□ -0.7
USP11-203ENST00000377080 GPRC5CQ9NQ84 441 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 CYP26B1Q9NR63 512 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 DDX56Q9NY93 547 aaKnown RBP10.66□□□□□ -0.7
USP11-203ENST00000377080 NKIRAS1Q9NYS0 192 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 NINJ2Q9NZG7 142 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 SMG5Q9UPR3 1016 aaKnown RBP10.66□□□□□ -0.7
USP11-203ENST00000377080 CTDP1Q9Y5B0 961 aaPredicted RBP10.66□□□□□ -0.7
USP11-203ENST00000377080 MYH9P35579 1960 aaKnown RBP10.66□□□□□ -0.7
USP11-203ENST00000377080 KIAA1217Q5T5P2 1943 aa10.66□□□□□ -0.7
USP11-203ENST00000377080 SSC5DA1L4H1 1573 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 RLFQ13129 1914 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 C19orf81C9J6K1 198 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 ALOX15BO15296 676 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 PRPF4O43172 522 aaKnown RBP eCLIP10.65□□□□□ -0.79e-6■□□□□ 10.5
USP11-203ENST00000377080 HLA-DRAP01903 254 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 BRAFP15056 766 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 EZRP15311 586 aaKnown RBP10.65□□□□□ -0.7
USP11-203ENST00000377080 EIF2AK2P19525 551 aaKnown RBP10.65□□□□□ -0.7
USP11-203ENST00000377080 MMP8P22894 467 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 CDH5P33151 784 aaPredicted RBP10.65□□□□□ -0.7
USP11-203ENST00000377080 ARL2P36404 184 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 LIG4P49917 911 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 ZNF132P52740 706 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 IL9RQ01113 521 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 SREBF2Q12772 1141 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 PIGHQ14442 188 aaPredicted RBP10.65□□□□□ -0.7
USP11-203ENST00000377080 MORF4L2Q15014 288 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 GNPTABQ3T906 1256 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 PRAMEF18Q5VWM3 479 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 CHRDL2Q6WN34 429 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 ZPBP2Q6X784 338 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 EXOC8Q8IYI6 725 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 UBR7Q8N806 425 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 REPS2Q8NFH8 660 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 DYDC1Q8WWB3 177 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 C1orf54Q8WWF1 131 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 BSNDQ8WZ55 320 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 MAML1Q92585 1016 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 TEPSINQ96N21 525 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 POP1Q99575 1024 aaKnown RBP10.65□□□□□ -0.7
USP11-203ENST00000377080 CFHR5Q9BXR6 569 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 TRIM7Q9C029 511 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 PORCNQ9H237 461 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 R3HDMLQ9H3Y0 253 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 JPH1Q9HDC5 661 aaPredicted RBP10.65□□□□□ -0.7
USP11-203ENST00000377080 XPNPEP1Q9NQW7 623 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 CHST7Q9NS84 486 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 ADAM22Q9P0K1 906 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 GABBR1Q9UBS5 961 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 SLC24A2Q9UI40 661 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 ZNF112Q9UJU3 913 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 AGO2Q9UKV8 859 aaKnown RBP10.65□□□□□ -0.7
USP11-203ENST00000377080 RPL26L1Q9UNX3 145 aaKnown RBP10.65□□□□□ -0.7
USP11-203ENST00000377080 NAALADL1Q9UQQ1 740 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 PTPN22Q9Y2R2 807 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 STARD13Q9Y3M8 1113 aa10.65□□□□□ -0.7
USP11-203ENST00000377080 MAFBQ9Y5Q3 323 aaPredicted RBP10.65□□□□□ -0.7
USP11-203ENST00000377080 DOCK1Q14185 1865 aa10.64□□□□□ -0.71
USP11-203ENST00000377080 COL6A3P12111 3177 aa10.64□□□□□ -0.71
USP11-203ENST00000377080 IGKV6D-21A0A0A0MT36 114 aa10.64□□□□□ -0.71
USP11-203ENST00000377080 A0A0B4J269 797 aa10.64□□□□□ -0.71
USP11-203ENST00000377080 TCRBV5S1A1TA0A578 114 aa10.64□□□□□ -0.71
USP11-203ENST00000377080 TMEM191CA6NGB0 347 aa10.64□□□□□ -0.71
USP11-203ENST00000377080 VGLL3A8MV65 326 aa10.64□□□□□ -0.71
USP11-203ENST00000377080 WNT10BO00744 389 aa10.64□□□□□ -0.71
USP11-203ENST00000377080 DNALI1O14645 258 aaPredicted RBP10.64□□□□□ -0.71
USP11-203ENST00000377080 ATMINO43313 823 aaPredicted RBP10.64□□□□□ -0.71
USP11-203ENST00000377080 ZNF862O60290 1169 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms