RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 ZNF132P52740 706 aa16.98■□□□□ 0.31
CNKSR1-202ENST00000374253 DPY19L2Q6NUT2 758 aa16.98■□□□□ 0.31
CNKSR1-202ENST00000374253 AFG1LQ8WV93 481 aa16.98■□□□□ 0.31
CNKSR1-202ENST00000374253 AKT3Q9Y243 479 aa16.98■□□□□ 0.31
CNKSR1-202ENST00000374253 PASKQ96RG2 1323 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 F8VP50 259 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 ADORA2AP29274 412 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 LSP1P33241 339 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 ASPAP45381 313 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 ARHGAP1Q07960 439 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 WDR72Q3MJ13 1102 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 TXNRD3NBQ6F5E7 133 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 PLEKHA7Q6IQ23 1121 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 KCNV1Q6PIU1 500 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 TSHZ1Q6ZSZ6 1077 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 DPH6Q7L8W6 267 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 PHF13Q86YI8 300 aaPredicted RBP16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 UBR7Q8N806 425 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 KCNN1Q92952 543 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 SLC10A4Q96EP9 437 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 XYLT2Q9H1B5 865 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 FZD8Q9H461 694 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 MROH8Q9H579 483 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 PTPRHQ9HD43 1115 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 PPANQ9NQ55 473 aaKnown RBP16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 CNTN6Q9UQ52 1028 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 CLEC11AQ9Y240 323 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 BRCA2P51587 3418 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 GOLGA8SH3BPF8 625 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 TRIM66O15016 1216 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 C22orf31O95567 290 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 LGALS2P05162 132 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 PSMC4P43686 418 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 OGDHQ02218 1023 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 SGSM1Q2NKQ1 1148 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 ARMC9Q7Z3E5 817 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 WDTC1Q8N5D0 677 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 FEZF2Q8TBJ5 459 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 PLVAPQ9BX97 442 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 LRRC19Q9H756 370 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 IFT122Q9HBG6 1241 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 HMGXB4Q9UGU5 601 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 GINS2Q9Y248 185 aa16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 RRP15Q9Y3B9 282 aaKnown RBP16.97■□□□□ 0.31
CNKSR1-202ENST00000374253 MEFVO15553 781 aaPredicted RBP16.96■□□□□ 0.31
CNKSR1-202ENST00000374253 HBP1O60381 514 aa16.96■□□□□ 0.31
CNKSR1-202ENST00000374253 PROZP22891 400 aa16.96■□□□□ 0.31
CNKSR1-202ENST00000374253 MMP8P22894 467 aa16.96■□□□□ 0.31
CNKSR1-202ENST00000374253 SLC1A1P43005 524 aa16.96■□□□□ 0.31
CNKSR1-202ENST00000374253 ZNF252P-AS1Q0IIN9 211 aa16.96■□□□□ 0.31
CNKSR1-202ENST00000374253 SNAPC2Q13487 334 aa16.96■□□□□ 0.31
CNKSR1-202ENST00000374253 MAP1SQ66K74 1059 aaPredicted RBP16.96■□□□□ 0.31
CNKSR1-202ENST00000374253 DENND2CQ68D51 928 aa16.96■□□□□ 0.31
CNKSR1-202ENST00000374253 TRIM72Q6ZMU5 477 aa16.96■□□□□ 0.31
CNKSR1-202ENST00000374253 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.96■□□□□ 0.31
CNKSR1-202ENST00000374253 HAUS1Q96CS2 278 aa16.96■□□□□ 0.31
CNKSR1-202ENST00000374253 C2orf40Q9H1Z8 148 aa16.96■□□□□ 0.31
CNKSR1-202ENST00000374253 PABPC3Q9H361 631 aaKnown RBP16.96■□□□□ 0.31
CNKSR1-202ENST00000374253 MRPL47Q9HD33 250 aaKnown RBP16.96■□□□□ 0.31
CNKSR1-202ENST00000374253 ERAP1Q9NZ08 941 aa16.96■□□□□ 0.31
CNKSR1-202ENST00000374253 ITGBL1O95965 494 aaPredicted RBP16.96■□□□□ 0.3
CNKSR1-202ENST00000374253 TNNC2P02585 160 aa16.96■□□□□ 0.3
CNKSR1-202ENST00000374253 ATF7P17544 494 aaPredicted RBP16.96■□□□□ 0.3
CNKSR1-202ENST00000374253 CHKAP35790 457 aa16.96■□□□□ 0.3
CNKSR1-202ENST00000374253 MDH1P40925 334 aaKnown RBP16.96■□□□□ 0.3
CNKSR1-202ENST00000374253 FNTAP49354 379 aa16.96■□□□□ 0.3
CNKSR1-202ENST00000374253 DRG2P55039 364 aaKnown RBP16.96■□□□□ 0.3
CNKSR1-202ENST00000374253 TFDP1Q14186 410 aa16.96■□□□□ 0.3
CNKSR1-202ENST00000374253 CHADLQ6NUI6 762 aa16.96■□□□□ 0.3
CNKSR1-202ENST00000374253 DENND1BQ6P3S1 775 aa16.96■□□□□ 0.3
CNKSR1-202ENST00000374253 DCUN1D2Q6PH85 259 aa16.96■□□□□ 0.3
CNKSR1-202ENST00000374253 RUFY4Q6ZNE9 571 aa16.96■□□□□ 0.3
CNKSR1-202ENST00000374253 RHOT1Q8IXI2 618 aa16.96■□□□□ 0.3
CNKSR1-202ENST00000374253 MDM1Q8TC05 714 aa16.96■□□□□ 0.3
CNKSR1-202ENST00000374253 DDX23Q9BUQ8 820 aaKnown RBP16.96■□□□□ 0.3
CNKSR1-202ENST00000374253 DCLK3Q9C098 648 aa16.96■□□□□ 0.3
CNKSR1-202ENST00000374253 RPF1Q9H9Y2 349 aaKnown RBP16.96■□□□□ 0.3
CNKSR1-202ENST00000374253 PARVAQ9NVD7 372 aa16.96■□□□□ 0.3
CNKSR1-202ENST00000374253 MTRF1LQ9UGC7 380 aaKnown RBP16.96■□□□□ 0.3
CNKSR1-202ENST00000374253 SIX4Q9UIU6 781 aa16.96■□□□□ 0.3
CNKSR1-202ENST00000374253 LACTBL1A8MY62 500 aa16.95■□□□□ 0.3
CNKSR1-202ENST00000374253 NDUFAB1O14561 156 aa16.95■□□□□ 0.3
CNKSR1-202ENST00000374253 TP73O15350 636 aa16.95■□□□□ 0.3
CNKSR1-202ENST00000374253 ITGB3P05106 788 aa16.95■□□□□ 0.3
CNKSR1-202ENST00000374253 C1QBPQ07021 282 aaKnown RBP16.95■□□□□ 0.3
CNKSR1-202ENST00000374253 TAPT1Q6NXT6 567 aa16.95■□□□□ 0.3
CNKSR1-202ENST00000374253 USP50Q70EL3 339 aaPredicted RBP16.95■□□□□ 0.3
CNKSR1-202ENST00000374253 C12orf50Q8NA57 414 aaPredicted RBP16.95■□□□□ 0.3
CNKSR1-202ENST00000374253 EPS8L3Q8TE67 593 aaKnown RBP16.95■□□□□ 0.3
CNKSR1-202ENST00000374253 ANKRD36BP1Q96IX9 119 aa16.95■□□□□ 0.3
CNKSR1-202ENST00000374253 SCLT1Q96NL6 688 aa16.95■□□□□ 0.3
CNKSR1-202ENST00000374253 OSBPL8Q9BZF1 889 aa16.95■□□□□ 0.3
CNKSR1-202ENST00000374253 SMYD3Q9H7B4 428 aa16.95■□□□□ 0.3
CNKSR1-202ENST00000374253 RNF19AQ9NV58 838 aa16.95■□□□□ 0.3
CNKSR1-202ENST00000374253 IVNS1ABPQ9Y6Y0 642 aa16.95■□□□□ 0.3
CNKSR1-202ENST00000374253 PDHXO00330 501 aa16.95■□□□□ 0.3
CNKSR1-202ENST00000374253 ACSL3O95573 720 aa16.95■□□□□ 0.3
CNKSR1-202ENST00000374253 STAG3L1P0CL83 205 aa16.95■□□□□ 0.3
CNKSR1-202ENST00000374253 LACTBP83111 547 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms