RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 GSTCDQ8NEC7 633 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 BCL7CQ8WUZ0 217 aaPredicted RBP11.2□□□□□ -0.62
COL5A1-202ENST00000371820 CPLX3Q8WVH0 158 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 LARP4BQ92615 738 aaKnown RBP11.2□□□□□ -0.62
COL5A1-202ENST00000371820 EXOC4Q96A65 974 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 MED15Q96RN5 788 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 PLIN2Q99541 437 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 ACO2Q99798 780 aaKnown RBP11.2□□□□□ -0.62
COL5A1-202ENST00000371820 TCHPQ9BT92 498 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 UBXN6Q9BZV1 441 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 POMKQ9H5K3 350 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 VIPAS39Q9H9C1 493 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 POLD4Q9HCU8 107 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 EXOC1Q9NV70 894 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 MIOSQ9NXC5 875 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 STK17AQ9UEE5 414 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 ADAM28Q9UKQ2 775 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 MYO6Q9UM54 1294 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 GDAQ9Y2T3 454 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 NR2E1Q9Y466 385 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.2□□□□□ -0.62
COL5A1-202ENST00000371820 DENND4AQ7Z401 1863 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 TARSL2A2RTX5 802 aaKnown RBP11.19□□□□□ -0.62
COL5A1-202ENST00000371820 TTLL13PA6NNM8 815 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 C2CD4DB7Z1M9 353 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 SLC16A4O15374 487 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 TBCAO75347 108 aaKnown RBP11.19□□□□□ -0.62
COL5A1-202ENST00000371820 NDUFA10O95299 355 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 GYPCP04921 128 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 MCF2P10911 925 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 PRLRP16471 622 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 PLCG1P19174 1290 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 PRCPP42785 496 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 DSG1Q02413 1049 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 TCF15Q12870 199 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 WDR93Q6P2C0 686 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 PDXDC1Q6P996 788 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 MPZL3Q6UWV2 235 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 RAD9BQ6WBX8 426 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 ZPBP2Q6X784 338 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 SV2BQ7L1I2 683 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 ZBTB33Q86T24 672 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 GPBP1Q86WP2 473 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 GRAMD1CQ8IYS0 662 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 RNF168Q8IYW5 571 aaPredicted RBP11.19□□□□□ -0.62
COL5A1-202ENST00000371820 GOLGA6L1Q8N7Z2 621 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 AUTS2Q8WXX7 1259 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 UROC1Q96N76 676 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 KLHL5Q96PQ7 755 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 WDR24Q96S15 920 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 PHOX2BQ99453 314 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 DNAJC7Q99615 494 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 TARS2Q9BW92 718 aaKnown RBP11.19□□□□□ -0.62
COL5A1-202ENST00000371820 CDT1Q9H211 546 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 VPS16Q9H269 839 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 SFXN1Q9H9B4 322 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 SLC38A7Q9NVC3 462 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 ZNF446Q9NWS9 450 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 CACNA1HO95180 2353 aa11.19□□□□□ -0.62
COL5A1-202ENST00000371820 MYH11P35749 1972 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 A0A087X0B3 334 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 SOWAHDA6NJG2 315 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 SFI1A8K8P3 1242 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 EIF3CLB5ME19 914 aaKnown RBP11.18□□□□□ -0.62
COL5A1-202ENST00000371820 C2CD2LO14523 706 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 PTGESO14684 152 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 MAP2K7O14733 419 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 TOM1L1O75674 476 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 EDN1P05305 212 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 CNPP09543 421 aaKnown RBP11.18□□□□□ -0.62
COL5A1-202ENST00000371820 EPCAMP16422 314 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 PLA2G4AP47712 749 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 CLCN4P51793 760 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 NCKAP1LP55160 1127 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 RAD51AP2Q09MP3 1159 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 MTMR3Q13615 1198 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 KARSQ15046 597 aaKnown RBP11.18□□□□□ -0.62
COL5A1-202ENST00000371820 SPA17Q15506 151 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 KYAT1Q16773 422 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 LONRF2Q1L5Z9 754 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 ATAT1Q5SQI0 421 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 RARS2Q5T160 578 aaKnown RBP11.18□□□□□ -0.62
COL5A1-202ENST00000371820 KREMEN2Q8NCW0 462 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 TMEM161BQ8NDZ6 487 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 SLC22A17Q8WUG5 538 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 HDAC7Q8WUI4 952 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 RAD54LQ92698 747 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 KCNN1Q92952 543 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 BICD1Q96G01 975 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 ACAP3Q96P50 834 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 ERGIC2Q96RQ1 377 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 EIF3CQ99613 913 aaKnown RBP11.18□□□□□ -0.62
COL5A1-202ENST00000371820 TSG101Q99816 390 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 VN1R3Q9BXE9 311 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 PARVGQ9HBI0 331 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 RXFP1Q9HBX9 757 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 MED4Q9NPJ6 270 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 LZTFL1Q9NQ48 299 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 RNF14Q9UBS8 474 aa11.18□□□□□ -0.62
COL5A1-202ENST00000371820 SORCS3Q9UPU3 1222 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms