RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 IRF2BP1Q8IU81 584 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 NUDCD3Q8IVD9 361 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 LRRC34Q8IZ02 419 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 DAGLBQ8NCG7 672 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 HASPINQ8TF76 798 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 ERP27Q96DN0 273 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 ACAP3Q96P50 834 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 XPO6Q96QU8 1125 aaKnown RBP9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 KIAA1586Q9HCI6 787 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 UBN1Q9NPG3 1134 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 GTSE1Q9NYZ3 720 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 KIF13BQ9NQT8 1826 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 WNT10BO00744 389 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 PHF2O75151 1096 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 SMIM24O75264 130 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 PMLP29590 882 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 MARCKSL1P49006 195 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 ALDH18A1P54886 795 aaKnown RBP9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 ERVK-9P63128 1117 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 ROR1Q01973 937 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 ORC2Q13416 577 aaPredicted RBP9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 ATP13A4Q4VNC1 1196 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 ACOT1Q86TX2 421 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 SPATS2Q86XZ4 545 aaKnown RBP9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 MIPOL1Q8TD10 442 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 SEC16BQ96JE7 1060 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 SPATA17Q96L03 361 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 PDCD2LQ9BRP1 358 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 MMTAG2Q9BU76 263 aaKnown RBP9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 KIF9Q9HAQ2 790 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 FAM198AQ9UFP1 575 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 CPSF3Q9UKF6 684 aaKnown RBP9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 FAM187AA6NFU0 413 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 DFFAO00273 331 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 GARSP41250 739 aaKnown RBP9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 RARRES1P49788 294 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 ARFIP2P53365 341 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 DCAF6Q58WW2 860 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 DLK2Q6UY11 383 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 MOB2Q70IA6 237 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 TRMT10CQ7L0Y3 403 aaKnown RBP9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 SH3RF1Q7Z6J0 888 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 CLMNQ96JQ2 1002 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 RIT2Q99578 217 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 YIPF3Q9GZM5 350 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 EPN3Q9H201 632 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 CD248Q9HCU0 757 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 PCMTD2Q9NV79 361 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 TIMM13Q9Y5L4 95 aaPredicted RBP9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 UPP2O95045 317 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 ENO1P06733 434 aaKnown RBP9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 GJB1P08034 283 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 TBXAS1P24557 533 aaPredicted RBP9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 MAGEA4P43358 317 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 IFI35P80217 286 aaPredicted RBP9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 PCSK7Q16549 785 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 PAPD7Q5XG87 772 aaKnown RBP9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 ICE2Q659A1 982 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 TRIM67Q6ZTA4 783 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 METTL23Q86XA0 190 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 CRLF3Q8IUI8 442 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 MMGT1Q8N4V1 131 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 VCXQ9H320 206 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 CYP26B1Q9NR63 512 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 ARFGEF2Q9Y6D5 1785 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 ANKRD63C9JTQ0 380 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 ATP9AO75110 1047 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 ZSCAN5DPP0CG00 497 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 PYGMP11217 842 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 TCN1P20061 433 aaPredicted RBP9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 COILP38432 576 aaPredicted RBP9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 PPP3CAQ08209 521 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 FUT2Q10981 343 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 PRPSAP1Q14558 356 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 ATF7IP2Q5U623 682 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 OTOP1Q7RTM1 612 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 AFG1LQ8WV93 481 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 L3MBTL3Q96JM7 780 aaPredicted RBP9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 FAM81BQ96LP2 452 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 NUDCD1Q96RS6 583 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 SENP7Q9BQF6 1050 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 TMEM8AQ9HCN3 771 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 LAMB2P55268 1798 aa9.58□□□□□ -0.88
SMARCA1-202ENST00000371122 SPTLC1O15269 473 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 SLC16A3O15427 465 aaKnown RBP9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 KRT7P08729 469 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 KCNMA1Q12791 1236 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 NOP9Q86U38 636 aaKnown RBP9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 CREG2Q8IUH2 290 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 ZNF384Q8TF68 577 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 LPAR1Q92633 364 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 CAMKK2Q96RR4 588 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 ISCUQ9H1K1 167 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 KLC4Q9NSK0 619 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 XPO7Q9UIA9 1087 aaKnown RBP9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 TMX2Q9Y320 296 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 A0A1W2PQJ5 194 aa9.57□□□□□ -0.88
SMARCA1-202ENST00000371122 TSPAN3O60637 253 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms