RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 ZNFX1Q9P2E3 1918 aaKnown RBP10.98□□□□□ -0.65
ABCF1-201ENST00000326195 SFNP31947 248 aa10.98□□□□□ -0.65
ABCF1-201ENST00000326195 NLRP11P59045 1033 aaKnown RBP10.98□□□□□ -0.65
ABCF1-201ENST00000326195 HHATQ5VTY9 493 aa10.98□□□□□ -0.65
ABCF1-201ENST00000326195 HGSNATQ68CP4 663 aa10.98□□□□□ -0.65
ABCF1-201ENST00000326195 UHMK1Q8TAS1 419 aaKnown RBP10.98□□□□□ -0.65
ABCF1-201ENST00000326195 CEP63Q96MT8 703 aa10.98□□□□□ -0.65
ABCF1-201ENST00000326195 EPB41L4BQ9H329 900 aa10.98□□□□□ -0.65
ABCF1-201ENST00000326195 PTPN22Q9Y2R2 807 aa10.98□□□□□ -0.65
ABCF1-201ENST00000326195 ECEL1O95672 775 aa10.98□□□□□ -0.65
ABCF1-201ENST00000326195 XRRA1Q6P2D8 792 aa10.98□□□□□ -0.65
ABCF1-201ENST00000326195 TMEM154Q6P9G4 183 aa10.98□□□□□ -0.65
ABCF1-201ENST00000326195 MAMDC4Q6UXC1 1216 aa10.98□□□□□ -0.65
ABCF1-201ENST00000326195 PEX26Q7Z412 305 aa10.98□□□□□ -0.65
ABCF1-201ENST00000326195 FITM2Q8N6M3 262 aa10.98□□□□□ -0.65
ABCF1-201ENST00000326195 BAP1Q92560 729 aa10.98□□□□□ -0.65
ABCF1-201ENST00000326195 LRRC45Q96CN5 670 aa10.98□□□□□ -0.65
ABCF1-201ENST00000326195 SENP7Q9BQF6 1050 aa10.98□□□□□ -0.65
ABCF1-201ENST00000326195 ATP11BQ9Y2G3 1177 aa10.98□□□□□ -0.65
ABCF1-201ENST00000326195 LRRC42Q9Y546 428 aa10.98□□□□□ -0.65
ABCF1-201ENST00000326195 LRRD1A4D1F6 860 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 EYA4O95677 639 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 AFPP02771 609 aaKnown RBP10.97□□□□□ -0.65
ABCF1-201ENST00000326195 BNIP1Q12981 228 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 EMC2Q15006 297 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 LRRC14Q15048 493 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 XKR3Q5GH77 459 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 FAM81AQ8TBF8 368 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 U2AF1L4Q8WU68 220 aaKnown RBP10.97□□□□□ -0.65
ABCF1-201ENST00000326195 USP6NLQ92738 828 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 PBKQ96KB5 322 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 KATNBL1Q9H079 304 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.97□□□□□ -0.651e-8■■□□□ 13
ABCF1-201ENST00000326195 DIS3Q9Y2L1 958 aaKnown RBP10.97□□□□□ -0.65
ABCF1-201ENST00000326195 GRID2IPA4D2P6 1211 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 TTI1O43156 1089 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 SNX3O60493 162 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 CYBAP13498 195 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 COPS2P61201 443 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 CETN1Q12798 172 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 MFSD10Q14728 455 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 FAM117BQ6P1L5 589 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 ASRGL1Q7L266 308 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 RNF10Q8N5U6 811 aaKnown RBP10.97□□□□□ -0.65
ABCF1-201ENST00000326195 ANKLE1Q8NAG6 615 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 ATL2Q8NHH9 583 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 CENPTQ96BT3 561 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 GLT1D1Q96MS3 346 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 OSMRQ99650 979 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 EDEM3Q9BZQ6 932 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 TMEM165Q9HC07 324 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 STARD7Q9NQZ5 370 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 DLGAP2Q9P1A6 1054 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 SAMD15Q9P1V8 674 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 SUCLA2Q9P2R7 463 aaPredicted RBP10.97□□□□□ -0.65
ABCF1-201ENST00000326195 FRMD4BQ9Y2L6 1034 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 SSU72P8A0A1W2PR75 194 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 FOXO6A8MYZ6 492 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 SP100P23497 879 aaPredicted RBP10.97□□□□□ -0.65
ABCF1-201ENST00000326195 PCK1P35558 622 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 GRIK4Q16099 956 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 CCDC38Q502W7 563 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 RNF180Q86T96 592 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 DEPTORQ8TB45 409 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 BSNDQ8WZ55 320 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 CHCHD3Q9NX63 227 aaKnown RBP10.97□□□□□ -0.65
ABCF1-201ENST00000326195 RNF14Q9UBS8 474 aa10.97□□□□□ -0.65
ABCF1-201ENST00000326195 BHMG1C9JSJ3 638 aaPredicted RBP10.96□□□□□ -0.65
ABCF1-201ENST00000326195 LUC7L3O95232 432 aaKnown RBP10.96□□□□□ -0.65
ABCF1-201ENST00000326195 HOXC6P09630 235 aa10.96□□□□□ -0.65
ABCF1-201ENST00000326195 H2AFZP0C0S5 128 aa10.96□□□□□ -0.65
ABCF1-201ENST00000326195 ABCB4P21439 1286 aa10.96□□□□□ -0.65
ABCF1-201ENST00000326195 STAT1P42224 750 aa10.96□□□□□ -0.65
ABCF1-201ENST00000326195 MMP13P45452 471 aa10.96□□□□□ -0.65
ABCF1-201ENST00000326195 CCL23P55773 120 aa10.96□□□□□ -0.65
ABCF1-201ENST00000326195 GIT2Q14161 759 aa10.96□□□□□ -0.65
ABCF1-201ENST00000326195 H2AFVQ71UI9 128 aa10.96□□□□□ -0.65
ABCF1-201ENST00000326195 TMEM106CQ9BVX2 250 aa10.96□□□□□ -0.65
ABCF1-201ENST00000326195 METTL14Q9HCE5 456 aaKnown RBP10.96□□□□□ -0.65
ABCF1-201ENST00000326195 MLXIPLQ9NP71 852 aa10.96□□□□□ -0.65
ABCF1-201ENST00000326195 KMT5AQ9NQR1 393 aa10.96□□□□□ -0.65
ABCF1-201ENST00000326195 FGFR1OP2Q9NVK5 253 aa10.96□□□□□ -0.65
ABCF1-201ENST00000326195 NR2E1Q9Y466 385 aa10.96□□□□□ -0.65
ABCF1-201ENST00000326195 TRIOBPQ9H2D6 2365 aa10.96□□□□□ -0.65
ABCF1-201ENST00000326195 A0A087WZ62 844 aa10.96□□□□□ -0.66
ABCF1-201ENST00000326195 STAM2O75886 525 aa10.96□□□□□ -0.66
ABCF1-201ENST00000326195 NPTXRO95502 500 aa10.96□□□□□ -0.66
ABCF1-201ENST00000326195 SMIM10L2AP0DMW4 78 aa10.96□□□□□ -0.66
ABCF1-201ENST00000326195 SMIM10L2BP0DMW5 78 aa10.96□□□□□ -0.66
ABCF1-201ENST00000326195 KRT13P13646 458 aa10.96□□□□□ -0.66
ABCF1-201ENST00000326195 ALDH3A1P30838 453 aa10.96□□□□□ -0.66
ABCF1-201ENST00000326195 THPOP40225 353 aa10.96□□□□□ -0.66
ABCF1-201ENST00000326195 CPT1AP50416 773 aa10.96□□□□□ -0.66
ABCF1-201ENST00000326195 SLC12A3P55017 1021 aa10.96□□□□□ -0.66
ABCF1-201ENST00000326195 ARHGAP44Q17R89 818 aa10.96□□□□□ -0.66
ABCF1-201ENST00000326195 ALKBH5Q6P6C2 394 aaKnown RBP10.96□□□□□ -0.66
ABCF1-201ENST00000326195 CTU1Q7Z7A3 348 aaKnown RBP10.96□□□□□ -0.66
ABCF1-201ENST00000326195 ZFAND2BQ8WV99 257 aa10.96□□□□□ -0.66
ABCF1-201ENST00000326195 CCDC127Q96BQ5 260 aa10.96□□□□□ -0.66
ABCF1-201ENST00000326195 PAWRQ96IZ0 340 aaKnown RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms