RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 CDKL2Q92772 493 aa17.66■□□□□ 0.42
LMNB2-201ENST00000325327 CFAP36Q96G28 342 aa17.66■□□□□ 0.42
LMNB2-201ENST00000325327 DUSP9Q99956 384 aaKnown RBP17.66■□□□□ 0.42
LMNB2-201ENST00000325327 P4HA2O15460 535 aa17.66■□□□□ 0.42
LMNB2-201ENST00000325327 ACSL3O95573 720 aa17.66■□□□□ 0.42
LMNB2-201ENST00000325327 KCNA2P16389 499 aa17.66■□□□□ 0.42
LMNB2-201ENST00000325327 TNFSF9P41273 254 aa17.66■□□□□ 0.42
LMNB2-201ENST00000325327 HEATR6Q6AI08 1181 aaKnown RBP17.66■□□□□ 0.42
LMNB2-201ENST00000325327 PLPPR4Q7Z2D5 763 aa17.66■□□□□ 0.42
LMNB2-201ENST00000325327 CD302Q8IX05 232 aa17.66■□□□□ 0.42
LMNB2-201ENST00000325327 TMEM161BQ8NDZ6 487 aa17.66■□□□□ 0.42
LMNB2-201ENST00000325327 RIN2Q8WYP3 895 aaPredicted RBP17.66■□□□□ 0.42
LMNB2-201ENST00000325327 DNAJC19Q96DA6 116 aa17.66■□□□□ 0.42
LMNB2-201ENST00000325327 FSD1LQ9BXM9 530 aa17.66■□□□□ 0.42
LMNB2-201ENST00000325327 IGFLR1Q9H665 355 aa17.66■□□□□ 0.42
LMNB2-201ENST00000325327 VAV3Q9UKW4 847 aa17.66■□□□□ 0.42
LMNB2-201ENST00000325327 ATP1A1P05023 1023 aaKnown RBP17.66■□□□□ 0.42
LMNB2-201ENST00000325327 MRPS6P82932 125 aaKnown RBP17.66■□□□□ 0.42
LMNB2-201ENST00000325327 SLC47A2Q86VL8 602 aa17.66■□□□□ 0.42
LMNB2-201ENST00000325327 MAP4K3Q8IVH8 894 aa17.66■□□□□ 0.42
LMNB2-201ENST00000325327 BBOF1Q8ND07 529 aa17.66■□□□□ 0.42
LMNB2-201ENST00000325327 PPTC7Q8NI37 304 aa17.66■□□□□ 0.42
LMNB2-201ENST00000325327 TNFRSF25Q93038 417 aa17.66■□□□□ 0.42
LMNB2-201ENST00000325327 TTC25Q96NG3 672 aa17.66■□□□□ 0.42
LMNB2-201ENST00000325327 FAM8A1Q9UBU6 413 aa17.66■□□□□ 0.42
LMNB2-201ENST00000325327 NFASCO94856 1347 aa17.66■□□□□ 0.42
LMNB2-201ENST00000325327 DLG4P78352 724 aa17.66■□□□□ 0.42
LMNB2-201ENST00000325327 WDR49Q8IV35 697 aa17.66■□□□□ 0.42
LMNB2-201ENST00000325327 CCDC33Q8N5R6 958 aa17.66■□□□□ 0.42
LMNB2-201ENST00000325327 EMC1Q8N766 993 aa17.66■□□□□ 0.42
LMNB2-201ENST00000325327 C10orf71Q711Q0 1435 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 SEC31AO94979 1220 aaKnown RBP17.65■□□□□ 0.42
LMNB2-201ENST00000325327 CALCAP01258 141 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 HSPA6P17066 643 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 CHSY1Q86X52 802 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 RAB3IL1Q8TBN0 382 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 FBF1Q8TES7 1133 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 SLC35C1Q96A29 364 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 EPAS1Q99814 870 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 DONSONQ9NYP3 566 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 LSM7Q9UK45 103 aaKnown RBP17.65■□□□□ 0.42
LMNB2-201ENST00000325327 ZNF862O60290 1169 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 DUSP11O75319 330 aaKnown RBP17.65■□□□□ 0.42
LMNB2-201ENST00000325327 APLP1P51693 650 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 TTC30BQ8N4P2 665 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 SLC20A1Q8WUM9 679 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 KAT5Q92993 513 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 FBXO32Q969P5 355 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 OSBPL9Q96SU4 736 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 EPC1Q9H2F5 836 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 ACP6Q9NPH0 428 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 SH3BP1Q9Y3L3 701 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 TRPM3Q9HCF6 1732 aaPredicted RBP17.65■□□□□ 0.42
LMNB2-201ENST00000325327 SEPT4O43236 478 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 PMLP29590 882 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 NDST1P52848 882 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 SLC35G1Q2M3R5 365 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 SAPCD2Q86UD0 394 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 TMC2Q8TDI7 906 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 PPP4R1Q8TF05 950 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 THAP2Q9H0W7 228 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 SMARCAL1Q9NZC9 954 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 NFU1Q9UMS0 254 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 SSU72P8A0A1W2PR75 194 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 WEE1P30291 646 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 MICALCLQ6ZW33 695 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 ELOA2Q8IYF1 753 aaPredicted RBP17.65■□□□□ 0.42
LMNB2-201ENST00000325327 RNF10Q8N5U6 811 aaKnown RBP17.65■□□□□ 0.42
LMNB2-201ENST00000325327 HELQQ8TDG4 1101 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 PLCD4Q9BRC7 762 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 CDT1Q9H211 546 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 SMPD4Q9NXE4 827 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 SCN11AQ9UI33 1791 aa17.65■□□□□ 0.42
LMNB2-201ENST00000325327 ZNF280DQ6N043 979 aa17.64■□□□□ 0.41
LMNB2-201ENST00000325327 PALB2Q86YC2 1186 aa17.64■□□□□ 0.41
LMNB2-201ENST00000325327 EFCAB13Q8IY85 973 aa17.64■□□□□ 0.41
LMNB2-201ENST00000325327 MS4A14Q96JA4 679 aa17.64■□□□□ 0.41
LMNB2-201ENST00000325327 KRT82Q9NSB4 513 aa17.64■□□□□ 0.41
LMNB2-201ENST00000325327 NUDT5Q9UKK9 219 aa17.64■□□□□ 0.41
LMNB2-201ENST00000325327 SCAMP3O14828 347 aaKnown RBP17.64■□□□□ 0.41
LMNB2-201ENST00000325327 ZNF185O15231 689 aa17.64■□□□□ 0.41
LMNB2-201ENST00000325327 RPLP2P05387 115 aaKnown RBP17.64■□□□□ 0.41
LMNB2-201ENST00000325327 CYP11B1P15538 503 aa17.64■□□□□ 0.41
LMNB2-201ENST00000325327 THOC5Q13769 683 aaKnown RBP17.64■□□□□ 0.41
LMNB2-201ENST00000325327 KCNT1Q5JUK3 1230 aa17.64■□□□□ 0.41
LMNB2-201ENST00000325327 BRSK2Q8IWQ3 736 aa17.64■□□□□ 0.41
LMNB2-201ENST00000325327 WDR35Q9P2L0 1181 aa17.64■□□□□ 0.41
LMNB2-201ENST00000325327 IPO11Q9UI26 975 aaKnown RBP17.64■□□□□ 0.41
LMNB2-201ENST00000325327 H3BRJ5 948 aa17.64■□□□□ 0.41
LMNB2-201ENST00000325327 M0QYT0 321 aa17.64■□□□□ 0.41
LMNB2-201ENST00000325327 MYBL1P10243 752 aa17.64■□□□□ 0.41
LMNB2-201ENST00000325327 ALDH3A1P30838 453 aa17.64■□□□□ 0.41
LMNB2-201ENST00000325327 PTPN11Q06124 597 aaPredicted RBP17.64■□□□□ 0.41
LMNB2-201ENST00000325327 CBWD6Q4V339 395 aa17.64■□□□□ 0.41
LMNB2-201ENST00000325327 CBWD3Q5JTY5 395 aa17.64■□□□□ 0.41
LMNB2-201ENST00000325327 CBWD5Q5RIA9 395 aa17.64■□□□□ 0.41
LMNB2-201ENST00000325327 NECAB2Q7Z6G3 386 aa17.64■□□□□ 0.41
LMNB2-201ENST00000325327 RNPC3Q96LT9 517 aaKnown RBP17.64■□□□□ 0.41
LMNB2-201ENST00000325327 TRAF3IP3Q9Y228 551 aa17.64■□□□□ 0.41
LMNB2-201ENST00000325327 CYBBP04839 570 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms