RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 FOXP3Q9BZS1 431 aa17.44■□□□□ 0.38
PACS1-201ENST00000320580 FMN2Q9NZ56 1722 aa17.44■□□□□ 0.38
PACS1-201ENST00000320580 TRIM43BA6NCK2 446 aa17.44■□□□□ 0.38
PACS1-201ENST00000320580 PSMC3P17980 439 aa17.44■□□□□ 0.38
PACS1-201ENST00000320580 TCN1P20061 433 aaPredicted RBP17.44■□□□□ 0.38
PACS1-201ENST00000320580 NMT1P30419 496 aaKnown RBP17.44■□□□□ 0.38
PACS1-201ENST00000320580 NUP107P57740 925 aa17.44■□□□□ 0.38
PACS1-201ENST00000320580 MYBPC3Q14896 1274 aa17.44■□□□□ 0.38
PACS1-201ENST00000320580 CCDC14Q49A88 953 aa17.44■□□□□ 0.38
PACS1-201ENST00000320580 SH3RF3Q8TEJ3 882 aaPredicted RBP17.44■□□□□ 0.38
PACS1-201ENST00000320580 C17orf50Q8WW18 174 aa17.44■□□□□ 0.38
PACS1-201ENST00000320580 CCDC28BQ9BUN5 200 aa17.44■□□□□ 0.38
PACS1-201ENST00000320580 ANKRD33BA6NCL7 494 aa17.44■□□□□ 0.38
PACS1-201ENST00000320580 WDR64B1ANS9 1081 aa17.44■□□□□ 0.38
PACS1-201ENST00000320580 ADCY6O43306 1168 aa17.44■□□□□ 0.38
PACS1-201ENST00000320580 SAT1P21673 171 aa17.44■□□□□ 0.38
PACS1-201ENST00000320580 NEK3P51956 506 aa17.44■□□□□ 0.38
PACS1-201ENST00000320580 ACVR2BQ13705 512 aa17.44■□□□□ 0.38
PACS1-201ENST00000320580 TCHHL1Q5QJ38 904 aaPredicted RBP17.44■□□□□ 0.38
PACS1-201ENST00000320580 RASGEF1CQ8N431 466 aa17.44■□□□□ 0.38
PACS1-201ENST00000320580 TMEM117Q9H0C3 514 aa17.44■□□□□ 0.38
PACS1-201ENST00000320580 RRN3Q9NYV6 651 aa17.44■□□□□ 0.38
PACS1-201ENST00000320580 TACC3Q9Y6A5 838 aa17.44■□□□□ 0.38
PACS1-201ENST00000320580 CCNB1P14635 433 aa17.44■□□□□ 0.38
PACS1-201ENST00000320580 MECOMQ03112 1051 aa17.44■□□□□ 0.38
PACS1-201ENST00000320580 ADRM1Q16186 407 aa17.44■□□□□ 0.38
PACS1-201ENST00000320580 RSPH3Q86UC2 560 aa17.44■□□□□ 0.38
PACS1-201ENST00000320580 SENP7Q9BQF6 1050 aa17.44■□□□□ 0.38
PACS1-201ENST00000320580 KLHL2O95198 593 aa17.43■□□□□ 0.38
PACS1-201ENST00000320580 ALADP13716 330 aa17.43■□□□□ 0.38
PACS1-201ENST00000320580 ENO3P13929 434 aaPredicted RBP17.43■□□□□ 0.38
PACS1-201ENST00000320580 NCKAP1LP55160 1127 aa17.43■□□□□ 0.38
PACS1-201ENST00000320580 OTUD4Q01804 1114 aaKnown RBP17.43■□□□□ 0.38
PACS1-201ENST00000320580 LPCAT4Q643R3 524 aa17.43■□□□□ 0.38
PACS1-201ENST00000320580 PLEKHA7Q6IQ23 1121 aa17.43■□□□□ 0.38
PACS1-201ENST00000320580 GPR141Q7Z602 305 aa17.43■□□□□ 0.38
PACS1-201ENST00000320580 UVRAGQ9P2Y5 699 aa17.43■□□□□ 0.38
PACS1-201ENST00000320580 MON2Q7Z3U7 1717 aa17.43■□□□□ 0.38
PACS1-201ENST00000320580 CHD2O14647 1828 aaKnown RBP17.43■□□□□ 0.38
PACS1-201ENST00000320580 RPTORQ8N122 1335 aa17.43■□□□□ 0.38
PACS1-201ENST00000320580 WDR46O15213 610 aaKnown RBP17.43■□□□□ 0.38
PACS1-201ENST00000320580 XPOTO43592 962 aaKnown RBP17.43■□□□□ 0.38
PACS1-201ENST00000320580 ITGA9Q13797 1035 aa17.43■□□□□ 0.38
PACS1-201ENST00000320580 DARS2Q6PI48 645 aaKnown RBP17.43■□□□□ 0.38
PACS1-201ENST00000320580 SCFD1Q8WVM8 642 aa17.43■□□□□ 0.38
PACS1-201ENST00000320580 ART4Q93070 314 aa17.43■□□□□ 0.38
PACS1-201ENST00000320580 ISCA1Q9BUE6 129 aa17.43■□□□□ 0.38
PACS1-201ENST00000320580 CALN1Q9BXU9 219 aa17.43■□□□□ 0.38
PACS1-201ENST00000320580 IQCA1LA6NCM1 817 aa17.43■□□□□ 0.38
PACS1-201ENST00000320580 CFBP00751 764 aa17.43■□□□□ 0.38
PACS1-201ENST00000320580 DHDDSQ86SQ9 333 aa17.43■□□□□ 0.38
PACS1-201ENST00000320580 DNAJC18Q9H819 358 aa17.43■□□□□ 0.38
PACS1-201ENST00000320580 SOX13Q9UN79 622 aa17.43■□□□□ 0.38
PACS1-201ENST00000320580 PIK3C2AO00443 1686 aa17.43■□□□□ 0.38
PACS1-201ENST00000320580 EYA4O95677 639 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 FOXN2P32314 431 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 NAA20P61599 178 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 PCGF5Q86SE9 256 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 SLC20A1Q8WUM9 679 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 EIF2AQ9BY44 585 aaKnown RBP17.42■□□□□ 0.38
PACS1-201ENST00000320580 SELENONQ9NZV5 590 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 PCYOX1Q9UHG3 505 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 BTNL10A8MVZ5 291 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 GPC4O75487 556 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 AKAP3O75969 853 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 BPIFB4P59827 614 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 ORC2Q13416 577 aaPredicted RBP17.42■□□□□ 0.38
PACS1-201ENST00000320580 FLOT2Q14254 428 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 POTEAQ6S8J7 498 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 VSTM1Q6UX27 236 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 CROCCP3Q8IVE0 287 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 CMTM5Q96DZ9 223 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 CLPTM1LQ96KA5 538 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 CHST7Q9NS84 486 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 ABCC6O95255 1503 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 SETD1AO15047 1707 aaKnown RBP17.42■□□□□ 0.38
PACS1-201ENST00000320580 MAN1A2O60476 641 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 HIRAP54198 1017 aaPredicted RBP17.42■□□□□ 0.38
PACS1-201ENST00000320580 CLVS1Q8IUQ0 354 aaPredicted RBP17.42■□□□□ 0.38
PACS1-201ENST00000320580 CDKL2Q92772 493 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 REEP2Q9BRK0 252 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 UPF3AQ9H1J1 476 aaKnown RBP17.42■□□□□ 0.38
PACS1-201ENST00000320580 EURLQ9NYK6 297 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 PRKAG3Q9UGI9 489 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 CIDEBQ9UHD4 219 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 BLOC1S6Q9UL45 172 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 FIS1Q9Y3D6 152 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 PCDHB4Q9Y5E5 795 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 USP17L5A8MUK1 530 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 USP17L15C9J2P7 530 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 USP17L13C9JLJ4 530 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 USP17L11C9JVI0 530 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 USP17L18D6R9N7 530 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 USP17L22D6RA61 530 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 USP17L17D6RBQ6 530 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 USP17L19D6RCP7 530 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 USP17L20D6RJB6 530 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 ALOX15P16050 662 aaPredicted RBP17.42■□□□□ 0.38
PACS1-201ENST00000320580 USP17L24Q0WX57 530 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 TRAPPC3LQ5T215 181 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms