RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 TTLL12Q14166 644 aaPredicted RBP18.34■□□□□ 0.53
CHRNA5-201ENST00000299565 MPP2Q14168 576 aa18.34■□□□□ 0.53
CHRNA5-201ENST00000299565 TMEM35BQ8NCS4 154 aa18.34■□□□□ 0.53
CHRNA5-201ENST00000299565 SENP7Q9BQF6 1050 aa18.34■□□□□ 0.53
CHRNA5-201ENST00000299565 HERPUD2Q9BSE4 406 aa18.34■□□□□ 0.53
CHRNA5-201ENST00000299565 MOV10L1Q9BXT6 1211 aaKnown RBP18.34■□□□□ 0.53
CHRNA5-201ENST00000299565 PARVAQ9NVD7 372 aa18.34■□□□□ 0.53
CHRNA5-201ENST00000299565 SCINQ9Y6U3 715 aa18.34■□□□□ 0.53
CHRNA5-201ENST00000299565 TCF4P15884 667 aa18.34■□□□□ 0.53
CHRNA5-201ENST00000299565 RPA3P35244 121 aaPredicted RBP18.34■□□□□ 0.53
CHRNA5-201ENST00000299565 PSMC1P62191 440 aaKnown RBP18.34■□□□□ 0.53
CHRNA5-201ENST00000299565 SLC15A2Q16348 729 aa18.34■□□□□ 0.53
CHRNA5-201ENST00000299565 HADHQ16836 314 aaKnown RBP18.34■□□□□ 0.53
CHRNA5-201ENST00000299565 ZBTB41Q5SVQ8 909 aa18.34■□□□□ 0.53
CHRNA5-201ENST00000299565 MIS18BP1Q6P0N0 1132 aa18.34■□□□□ 0.53
CHRNA5-201ENST00000299565 SAMD7Q7Z3H4 446 aa18.34■□□□□ 0.53
CHRNA5-201ENST00000299565 NCAPG2Q86XI2 1143 aa18.34■□□□□ 0.53
CHRNA5-201ENST00000299565 LMNTD2Q8IXW0 634 aa18.34■□□□□ 0.53
CHRNA5-201ENST00000299565 HELQQ8TDG4 1101 aa18.34■□□□□ 0.53
CHRNA5-201ENST00000299565 A0A1W2PPM1 405 aa18.34■□□□□ 0.53
CHRNA5-201ENST00000299565 XRCC4Q13426 336 aa18.34■□□□□ 0.53
CHRNA5-201ENST00000299565 ZC3H3Q8IXZ2 948 aaKnown RBP18.34■□□□□ 0.53
CHRNA5-201ENST00000299565 FAM71DQ8N9W8 422 aa18.34■□□□□ 0.53
CHRNA5-201ENST00000299565 LMO3Q8TAP4 145 aa18.34■□□□□ 0.53
CHRNA5-201ENST00000299565 FEZF2Q8TBJ5 459 aa18.34■□□□□ 0.53
CHRNA5-201ENST00000299565 MTMR12Q9C0I1 747 aa18.34■□□□□ 0.53
CHRNA5-201ENST00000299565 E2F8A0AVK6 867 aa18.33■□□□□ 0.53
CHRNA5-201ENST00000299565 ARHGAP42A6NI28 874 aa18.33■□□□□ 0.53
CHRNA5-201ENST00000299565 CUL2Q13617 745 aa18.33■□□□□ 0.53
CHRNA5-201ENST00000299565 PGM5Q15124 567 aa18.33■□□□□ 0.53
CHRNA5-201ENST00000299565 WDR72Q3MJ13 1102 aa18.33■□□□□ 0.53
CHRNA5-201ENST00000299565 DPY19L2P1Q6NXN4 242 aa18.33■□□□□ 0.53
CHRNA5-201ENST00000299565 RSBN1LQ6PCB5 846 aaPredicted RBP18.33■□□□□ 0.53
CHRNA5-201ENST00000299565 WRNIP1Q96S55 665 aa18.33■□□□□ 0.53
CHRNA5-201ENST00000299565 UMODL1Q5DID0 1318 aa18.33■□□□□ 0.52
CHRNA5-201ENST00000299565 GYG2O15488 501 aa18.33■□□□□ 0.52
CHRNA5-201ENST00000299565 EPHB2P29323 1055 aa18.33■□□□□ 0.52
CHRNA5-201ENST00000299565 NRLP54845 237 aa18.33■□□□□ 0.52
CHRNA5-201ENST00000299565 TFDP1Q14186 410 aa18.33■□□□□ 0.52
CHRNA5-201ENST00000299565 KRT81Q14533 505 aa18.33■□□□□ 0.52
CHRNA5-201ENST00000299565 MTDHQ86UE4 582 aaKnown RBP18.33■□□□□ 0.52
CHRNA5-201ENST00000299565 RBM41Q96IZ5 413 aaKnown RBP18.33■□□□□ 0.52
CHRNA5-201ENST00000299565 MYLK2Q9H1R3 596 aa18.33■□□□□ 0.52
CHRNA5-201ENST00000299565 EPB41L4BQ9H329 900 aa18.33■□□□□ 0.52
CHRNA5-201ENST00000299565 SMCHD1A6NHR9 2005 aa18.33■□□□□ 0.52
CHRNA5-201ENST00000299565 DNAJC8O75937 253 aaPredicted RBP18.32■□□□□ 0.52
CHRNA5-201ENST00000299565 DSG3P32926 999 aa18.32■□□□□ 0.52
CHRNA5-201ENST00000299565 CAV1Q03135 178 aa18.32■□□□□ 0.52
CHRNA5-201ENST00000299565 TSNAXIP1Q2TAA8 658 aa18.32■□□□□ 0.52
CHRNA5-201ENST00000299565 DDX60Q8IY21 1712 aaKnown RBP18.32■□□□□ 0.52
CHRNA5-201ENST00000299565 DGAT1O75907 488 aa18.32■□□□□ 0.52
CHRNA5-201ENST00000299565 CYP1A2P05177 515 aa18.32■□□□□ 0.52
CHRNA5-201ENST00000299565 ESRRAP11474 423 aaPredicted RBP18.32■□□□□ 0.52
CHRNA5-201ENST00000299565 SFNP31947 248 aa18.32■□□□□ 0.52
CHRNA5-201ENST00000299565 SLC1A1P43005 524 aa18.32■□□□□ 0.52
CHRNA5-201ENST00000299565 GTF2BQ00403 316 aa18.32■□□□□ 0.52
CHRNA5-201ENST00000299565 SLC9A9Q8IVB4 645 aa18.32■□□□□ 0.52
CHRNA5-201ENST00000299565 PPFIBP2Q8ND30 876 aa18.32■□□□□ 0.52
CHRNA5-201ENST00000299565 OSBPL1AQ9BXW6 950 aa18.32■□□□□ 0.52
CHRNA5-201ENST00000299565 RANBP17Q9H2T7 1088 aaKnown RBP18.32■□□□□ 0.52
CHRNA5-201ENST00000299565 LRRC19Q9H756 370 aa18.32■□□□□ 0.52
CHRNA5-201ENST00000299565 IP6K2Q9UHH9 426 aa18.32■□□□□ 0.52
CHRNA5-201ENST00000299565 TELO2Q9Y4R8 837 aa18.32■□□□□ 0.52
CHRNA5-201ENST00000299565 ADRA1DP25100 572 aa18.32■□□□□ 0.52
CHRNA5-201ENST00000299565 HSPA1LP34931 641 aa18.32■□□□□ 0.52
CHRNA5-201ENST00000299565 ACTR2P61160 394 aa18.32■□□□□ 0.52
CHRNA5-201ENST00000299565 OR6B2Q6IFH4 312 aa18.32■□□□□ 0.52
CHRNA5-201ENST00000299565 C7orf31Q8N865 590 aa18.32■□□□□ 0.52
CHRNA5-201ENST00000299565 OR5B17Q8NGF7 314 aa18.32■□□□□ 0.52
CHRNA5-201ENST00000299565 NSUN6Q8TEA1 469 aaKnown RBP18.32■□□□□ 0.52
CHRNA5-201ENST00000299565 CKAP2Q8WWK9 683 aa18.32■□□□□ 0.52
CHRNA5-201ENST00000299565 CENPTQ96BT3 561 aa18.32■□□□□ 0.52
CHRNA5-201ENST00000299565 ADAM7Q9H2U9 754 aa18.32■□□□□ 0.52
CHRNA5-201ENST00000299565 RIPK3Q9Y572 518 aa18.32■□□□□ 0.52
CHRNA5-201ENST00000299565 YDJCA8MPS7 323 aa18.31■□□□□ 0.52
CHRNA5-201ENST00000299565 FSCN2O14926 492 aa18.31■□□□□ 0.52
CHRNA5-201ENST00000299565 GHRP10912 638 aa18.31■□□□□ 0.52
CHRNA5-201ENST00000299565 CTCFP49711 727 aaPredicted RBP18.31■□□□□ 0.52
CHRNA5-201ENST00000299565 EMC2Q15006 297 aa18.31■□□□□ 0.52
CHRNA5-201ENST00000299565 ZRSR2Q15696 482 aaKnown RBP18.31■□□□□ 0.52
CHRNA5-201ENST00000299565 ZNF699Q32M78 642 aa18.31■□□□□ 0.52
CHRNA5-201ENST00000299565 TTLL6Q8N841 843 aa18.31■□□□□ 0.52
CHRNA5-201ENST00000299565 CCDC110Q8TBZ0 833 aa18.31■□□□□ 0.52
CHRNA5-201ENST00000299565 ACTL9Q8TC94 416 aa18.31■□□□□ 0.52
CHRNA5-201ENST00000299565 ZNF606Q8WXB4 792 aa18.31■□□□□ 0.52
CHRNA5-201ENST00000299565 CRYGNQ8WXF5 182 aa18.31■□□□□ 0.52
CHRNA5-201ENST00000299565 PPARGC1AQ9UBK2 798 aaKnown RBP18.31■□□□□ 0.52
CHRNA5-201ENST00000299565 G3BP2Q9UN86 482 aaKnown RBP18.31■□□□□ 0.52
CHRNA5-201ENST00000299565 MCF2LO15068 1137 aa18.31■□□□□ 0.52
CHRNA5-201ENST00000299565 CETPP11597 493 aa18.31■□□□□ 0.52
CHRNA5-201ENST00000299565 KRT3P12035 628 aa18.31■□□□□ 0.52
CHRNA5-201ENST00000299565 RAP1GAPP47736 663 aa18.31■□□□□ 0.52
CHRNA5-201ENST00000299565 ARL4CP56559 192 aa18.31■□□□□ 0.52
CHRNA5-201ENST00000299565 EFTUD2Q15029 972 aaKnown RBP eCLIP18.31■□□□□ 0.52
CHRNA5-201ENST00000299565 TAF1BQ53T94 588 aaPredicted RBP18.31■□□□□ 0.52
CHRNA5-201ENST00000299565 VSTM1Q6UX27 236 aa18.31■□□□□ 0.52
CHRNA5-201ENST00000299565 CCDC60Q8IWA6 550 aaPredicted RBP18.31■□□□□ 0.52
CHRNA5-201ENST00000299565 RNF149Q8NC42 400 aa18.31■□□□□ 0.52
CHRNA5-201ENST00000299565 YY1AP1Q9H869 796 aa18.31■□□□□ 0.52
CHRNA5-201ENST00000299565 USH1CQ9Y6N9 552 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms