RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C FMP16Q12497 93 aa2.77□□□□□ -1.97
RPA43YOR340C SAL1D6W196 494 aa2.76□□□□□ -1.97
RPA43YOR340C REP1P03871 373 aa2.76□□□□□ -1.97
RPA43YOR340C PRB1P09232 635 aa2.76□□□□□ -1.97
RPA43YOR340C DBF2P22204 572 aa2.76□□□□□ -1.97
RPA43YOR340C CDC50P25656 391 aa2.76□□□□□ -1.97
RPA43YOR340C ECM14P38836 430 aa2.76□□□□□ -1.97
RPA43YOR340C IPT1P38954 527 aa2.76□□□□□ -1.97
RPA43YOR340C YER184CP39961 794 aa2.76□□□□□ -1.97
RPA43YOR340C AVT6P40074 448 aa2.76□□□□□ -1.97
RPA43YOR340C PRE5P40302 234 aaKnown RBP2.76□□□□□ -1.97
RPA43YOR340C COX16P47081 118 aa2.76□□□□□ -1.97
RPA43YOR340C TLG1Q03322 224 aa2.76□□□□□ -1.97
RPA43YOR340C YMR252CQ04814 134 aa2.76□□□□□ -1.97
RPA43YOR340C NMA1Q06178 401 aaKnown RBP2.76□□□□□ -1.97
RPA43YOR340C YLR173WQ06247 608 aa2.76□□□□□ -1.97
RPA43YOR340C PBP4Q07362 185 aaKnown RBP2.76□□□□□ -1.97
RPA43YOR340C RPL35AP0CX84 120 aaKnown RBP2.75□□□□□ -1.97
RPA43YOR340C RPL35BP0CX85 120 aaKnown RBP2.75□□□□□ -1.97
RPA43YOR340C ZRT1P32804 376 aa2.75□□□□□ -1.97
RPA43YOR340C CLB6P32943 380 aa2.75□□□□□ -1.97
RPA43YOR340C SRP102P36057 244 aaPredicted RBP2.75□□□□□ -1.97
RPA43YOR340C ECM4P36156 370 aa2.75□□□□□ -1.97
RPA43YOR340C PRS3P38689 320 aaKnown RBP2.75□□□□□ -1.97
RPA43YOR340C FLX1P40464 311 aa2.75□□□□□ -1.97
RPA43YOR340C TIR3P40552 269 aa2.75□□□□□ -1.97
RPA43YOR340C MNT4P53745 580 aa2.75□□□□□ -1.97
RPA43YOR340C YMR279CQ03263 540 aa2.75□□□□□ -1.97
RPA43YOR340C YDR391CQ04170 232 aa2.75□□□□□ -1.97
RPA43YOR340C RNH1Q04740 348 aa2.75□□□□□ -1.97
RPA43YOR340C YMR315WQ04869 349 aaKnown RBP2.75□□□□□ -1.97
RPA43YOR340C MRX8Q05473 314 aa2.75□□□□□ -1.97
RPA43YOR340C NNT1Q05874 261 aa2.75□□□□□ -1.97
RPA43YOR340C HEM25Q07534 307 aa2.75□□□□□ -1.97
RPA43YOR340C SYC1Q08553 188 aaPredicted RBP2.75□□□□□ -1.97
RPA43YOR340C TRM10Q12400 293 aa2.75□□□□□ -1.97
RPA43YOR340C MSW1P04803 379 aa2.74□□□□□ -1.97
RPA43YOR340C SGA1P08019 549 aa2.74□□□□□ -1.97
RPA43YOR340C ZRC1P20107 442 aa2.74□□□□□ -1.97
RPA43YOR340C IDP1P21954 428 aaKnown RBP2.74□□□□□ -1.97
RPA43YOR340C PDC2P32896 925 aa2.74□□□□□ -1.97
RPA43YOR340C ZRT3P34240 503 aa2.74□□□□□ -1.97
RPA43YOR340C SWD2P36104 329 aaPredicted RBP2.74□□□□□ -1.97
RPA43YOR340C YHR035WP38769 630 aa2.74□□□□□ -1.97
RPA43YOR340C PEX22P39718 180 aa2.74□□□□□ -1.97
RPA43YOR340C FMC1P40491 155 aa2.74□□□□□ -1.97
RPA43YOR340C VMA10P48836 114 aaKnown RBP2.74□□□□□ -1.97
RPA43YOR340C UBC13P52490 153 aa2.74□□□□□ -1.97
RPA43YOR340C HHT1P61830 136 aa2.74□□□□□ -1.97
RPA43YOR340C ASR1Q06834 288 aa2.74□□□□□ -1.97
RPA43YOR340C RRS1Q08746 203 aaKnown RBP2.74□□□□□ -1.97
RPA43YOR340C MED11Q99278 115 aa2.74□□□□□ -1.97
RPA43YOR340C RPL39P04650 51 aa2.73□□□□□ -1.97
RPA43YOR340C DSF1P0CX08 502 aa2.73□□□□□ -1.97
RPA43YOR340C YNR073CP0CX09 502 aa2.73□□□□□ -1.97
RPA43YOR340C ARO7P32178 256 aa2.73□□□□□ -1.97
RPA43YOR340C CLG1P35190 452 aa2.73□□□□□ -1.97
RPA43YOR340C FRM2P37261 193 aa2.73□□□□□ -1.97
RPA43YOR340C CTR2P38865 189 aa2.73□□□□□ -1.97
RPA43YOR340C PDS1P40316 373 aaPredicted RBP2.73□□□□□ -1.97
RPA43YOR340C SLM1P40485 686 aa2.73□□□□□ -1.97
RPA43YOR340C MSS2P40990 351 aa2.73□□□□□ -1.97
RPA43YOR340C GLR1P41921 483 aaKnown RBP2.73□□□□□ -1.97
RPA43YOR340C IGD1P43598 195 aa2.73□□□□□ -1.97
RPA43YOR340C CCC1P47818 322 aa2.73□□□□□ -1.97
RPA43YOR340C PAU12P53343 120 aa2.73□□□□□ -1.97
RPA43YOR340C RNH201P53942 307 aa2.73□□□□□ -1.97
RPA43YOR340C ADD37Q03233 198 aa2.73□□□□□ -1.97
RPA43YOR340C MAK3Q03503 176 aa2.73□□□□□ -1.97
RPA43YOR340C YDR114CQ04597 100 aa2.73□□□□□ -1.97
RPA43YOR340C YOR097CQ12274 175 aaPredicted RBP2.73□□□□□ -1.97
RPA43YOR340C RTR2Q12378 196 aa2.73□□□□□ -1.97
RPA43YOR340C SIR2P06700 562 aa2.72□□□□□ -1.97
RPA43YOR340C IES6P32617 166 aa2.72□□□□□ -1.97
RPA43YOR340C KTI12P34253 313 aaKnown RBP2.72□□□□□ -1.97
RPA43YOR340C MCH2P36032 473 aa2.72□□□□□ -1.97
RPA43YOR340C YBR096WP38256 230 aa2.72□□□□□ -1.97
RPA43YOR340C GOS1P38736 223 aa2.72□□□□□ -1.97
RPA43YOR340C GVP36P40531 326 aaKnown RBP2.72□□□□□ -1.97
RPA43YOR340C YIR020CP40575 100 aa2.72□□□□□ -1.97
RPA43YOR340C YGL159WP53110 370 aa2.72□□□□□ -1.97
RPA43YOR340C APJ1P53940 528 aa2.72□□□□□ -1.97
RPA43YOR340C BUD25P85052 153 aa2.72□□□□□ -1.97
RPA43YOR340C GRX3Q03835 250 aa2.72□□□□□ -1.97
RPA43YOR340C YDR115WQ04598 105 aa2.72□□□□□ -1.97
RPA43YOR340C GAL83Q04739 417 aa2.72□□□□□ -1.97
RPA43YOR340C MHR1Q06630 226 aa2.72□□□□□ -1.97
RPA43YOR340C MRX9Q07349 420 aaKnown RBP2.72□□□□□ -1.97
RPA43YOR340C YOR029WQ12243 111 aa2.72□□□□□ -1.97
RPA43YOR340C YEL009C-AA0A023PZF2 135 aa2.71□□□□□ -1.98
RPA43YOR340C TDH3P00359 332 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
RPA43YOR340C ADK1P07170 222 aaKnown RBP2.71□□□□□ -1.98
RPA43YOR340C RPS23AP0CX29 145 aaKnown RBP2.71□□□□□ -1.98
RPA43YOR340C RPS23BP0CX30 145 aa2.71□□□□□ -1.98
RPA43YOR340C MRP1P10662 321 aaKnown RBP2.71□□□□□ -1.98
RPA43YOR340C PRE7P23724 241 aaKnown RBP2.71□□□□□ -1.98
RPA43YOR340C RPS5P26783 225 aaKnown RBP2.71□□□□□ -1.98
RPA43YOR340C ERG24P32462 438 aaKnown RBP2.71□□□□□ -1.98
RPA43YOR340C AGA2P32781 87 aa2.71□□□□□ -1.98
RPA43YOR340C PAU24P38155 120 aa2.71□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms