RNA–Protein interactions for RNA: YLR408C

BLS1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene BLS1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BLS1YLR408C ATP15P21306 62 aa2.23□□□□□ -2.05
BLS1YLR408C RFA3P26755 122 aaKnown RBP2.23□□□□□ -2.05
BLS1YLR408C TFC1P32367 649 aa2.23□□□□□ -2.05
BLS1YLR408C SPS18P32572 300 aa2.23□□□□□ -2.05
BLS1YLR408C YBR209WP38311 105 aa2.23□□□□□ -2.05
BLS1YLR408C YBR285WP38354 144 aa2.23□□□□□ -2.05
BLS1YLR408C TRM5P38793 499 aa2.23□□□□□ -2.05
BLS1YLR408C AST2P39945 430 aaKnown RBP2.23□□□□□ -2.05
BLS1YLR408C SAY1P53324 424 aa2.23□□□□□ -2.05
BLS1YLR408C RPL25P04456 142 aaKnown RBP2.22□□□□□ -2.05
BLS1YLR408C CDC36P06100 191 aaPredicted RBP2.22□□□□□ -2.05
BLS1YLR408C GGA1Q06336 557 aa2.22□□□□□ -2.05
BLS1YLR408C JIP3O13555 125 aa2.21□□□□□ -2.06
BLS1YLR408C SIR2P06700 562 aa2.21□□□□□ -2.06
BLS1YLR408C FPR1P20081 114 aaKnown RBP2.21□□□□□ -2.06
BLS1YLR408C EAF6P47128 113 aa2.21□□□□□ -2.06
BLS1YLR408C CUS2P53830 285 aaPredicted RBP2.21□□□□□ -2.06
BLS1YLR408C GPA2P10823 449 aa2.2□□□□□ -2.06
BLS1YLR408C ERG10P41338 398 aaKnown RBP2.2□□□□□ -2.06
BLS1YLR408C KNH1P50112 268 aa2.2□□□□□ -2.06
BLS1YLR408C NUP49Q02199 472 aa2.2□□□□□ -2.06
BLS1YLR408C MDM32Q12171 622 aa2.2□□□□□ -2.06
BLS1YLR408C MET5P47169 1442 aa2.19□□□□□ -2.06
BLS1YLR408C HTB1P02293 131 aaKnown RBP2.19□□□□□ -2.06
BLS1YLR408C HTB2P02294 131 aa2.19□□□□□ -2.06
BLS1YLR408C CPA1P07258 411 aaKnown RBP2.19□□□□□ -2.06
BLS1YLR408C YKT6P36015 200 aaKnown RBP2.19□□□□□ -2.06
BLS1YLR408C HMF1P40037 129 aaKnown RBP2.19□□□□□ -2.06
BLS1YLR408C ERJ5P43613 295 aaPredicted RBP2.19□□□□□ -2.06
BLS1YLR408C YDR274CP87283 123 aa2.19□□□□□ -2.06
BLS1YLR408C YMR226CQ05016 267 aaKnown RBP2.19□□□□□ -2.06
BLS1YLR408C YCL012CQ8J0M4 134 aa2.19□□□□□ -2.06
BLS1YLR408C YLR236CA0A023PZG4 107 aa2.18□□□□□ -2.06
BLS1YLR408C YOL160WQ08321 113 aa2.18□□□□□ -2.06
BLS1YLR408C RIO1Q12196 484 aaKnown RBP2.18□□□□□ -2.06
BLS1YLR408C RPL27AP0C2H6 136 aaKnown RBP2.17□□□□□ -2.06
BLS1YLR408C CKS1P20486 150 aaKnown RBP2.17□□□□□ -2.06
BLS1YLR408C KDX1P36005 433 aa2.17□□□□□ -2.06
BLS1YLR408C CWC21Q03375 135 aaKnown RBP2.17□□□□□ -2.06
BLS1YLR408C CNB1P25296 175 aa2.16□□□□□ -2.06
BLS1YLR408C VMA22P38784 181 aa2.16□□□□□ -2.06
BLS1YLR408C RFC4P40339 323 aaKnown RBP2.16□□□□□ -2.06
BLS1YLR408C AIM25P47140 327 aa2.15□□□□□ -2.07
BLS1YLR408C MRPS17Q03246 237 aaPredicted RBP2.15□□□□□ -2.07
BLS1YLR408C HNT1Q04344 158 aaKnown RBP2.15□□□□□ -2.07
BLS1YLR408C YRA1Q12159 226 aaKnown RBP2.15□□□□□ -2.07
BLS1YLR408C ADF1Q2V2Q1 113 aa2.15□□□□□ -2.07
BLS1YLR408C ODC2Q99297 307 aa2.15□□□□□ -2.07
BLS1YLR408C IKI3Q06706 1349 aaKnown RBP2.15□□□□□ -2.07
BLS1YLR408C QCR8P08525 94 aa2.14□□□□□ -2.07
BLS1YLR408C YER034WP40022 185 aaKnown RBP2.14□□□□□ -2.07
BLS1YLR408C CUE4Q04201 117 aaPredicted RBP2.14□□□□□ -2.07
BLS1YLR408C ABP140Q08641 628 aaKnown RBP2.14□□□□□ -2.07
BLS1YLR408C YDL180WQ12301 547 aa2.14□□□□□ -2.07
BLS1YLR408C SEC11P15367 167 aa2.13□□□□□ -2.07
BLS1YLR408C OCH1P31755 480 aa2.13□□□□□ -2.07
BLS1YLR408C ASF2P32448 525 aaPredicted RBP2.13□□□□□ -2.07
BLS1YLR408C MATALPHA2P0CY08 210 aa2.12□□□□□ -2.07
BLS1YLR408C HMLALPHA2P0CY09 210 aa2.12□□□□□ -2.07
BLS1YLR408C CBF1P17106 351 aa2.12□□□□□ -2.07
BLS1YLR408C OPY1P38271 328 aa2.12□□□□□ -2.07
BLS1YLR408C GET1P53192 235 aa2.12□□□□□ -2.07
BLS1YLR408C MPC3P53311 146 aa2.12□□□□□ -2.07
BLS1YLR408C QCR7P00128 127 aa2.11□□□□□ -2.07
BLS1YLR408C TVP38P36164 337 aa2.11□□□□□ -2.07
BLS1YLR408C YER076CP40049 302 aa2.11□□□□□ -2.07
BLS1YLR408C NOP19P53317 196 aaPredicted RBP2.11□□□□□ -2.07
BLS1YLR408C GRX3Q03835 250 aa2.11□□□□□ -2.07
BLS1YLR408C RAD28Q12021 506 aa2.11□□□□□ -2.07
BLS1YLR408C GET4Q12125 312 aa2.11□□□□□ -2.07
BLS1YLR408C MRS1P07266 363 aa2.1□□□□□ -2.07
BLS1YLR408C SPO13P23624 291 aa2.1□□□□□ -2.07
BLS1YLR408C SKI6P46948 246 aaPredicted RBP2.1□□□□□ -2.07
BLS1YLR408C CGR1P53188 120 aa2.1□□□□□ -2.07
BLS1YLR408C MPA43P53583 542 aaPredicted RBP2.1□□□□□ -2.07
BLS1YLR408C POR1P04840 283 aaKnown RBP2.09□□□□□ -2.07
BLS1YLR408C YCR090CP25654 182 aaKnown RBP2.09□□□□□ -2.07
BLS1YLR408C YEA4P40004 342 aa2.09□□□□□ -2.07
BLS1YLR408C MMS2P53152 137 aa2.09□□□□□ -2.07
BLS1YLR408C MBF1O14467 151 aaKnown RBP2.08□□□□□ -2.08
BLS1YLR408C PAN3P36102 679 aaPredicted RBP2.08□□□□□ -2.08
BLS1YLR408C UBC7Q02159 165 aa2.08□□□□□ -2.08
BLS1YLR408C DGA1Q08650 418 aa2.08□□□□□ -2.08
BLS1YLR408C ARP3P47117 449 aaKnown RBP2.07□□□□□ -2.08
BLS1YLR408C DYN3Q04949 312 aa2.07□□□□□ -2.08
BLS1YLR408C FUS2Q05670 677 aa2.07□□□□□ -2.08
BLS1YLR408C SER2P42941 309 aa2.06□□□□□ -2.08
BLS1YLR408C YNL146C-AQ3E7Z1 64 aa2.06□□□□□ -2.08
BLS1YLR408C AIM2P39721 246 aa2.05□□□□□ -2.08
BLS1YLR408C RIO2P40160 425 aaKnown RBP2.05□□□□□ -2.08
BLS1YLR408C FLX1P40464 311 aa2.05□□□□□ -2.08
BLS1YLR408C ARO80Q04052 950 aa2.05□□□□□ -2.08
BLS1YLR408C MSB2P32334 1306 aa2.05□□□□□ -2.08
BLS1YLR408C YER134CP40081 178 aa2.04□□□□□ -2.08
BLS1YLR408C YAE1P47118 141 aaPredicted RBP2.04□□□□□ -2.08
BLS1YLR408C YHR007C-AQ07074 71 aa2.04□□□□□ -2.08
BLS1YLR408C YAR023CD6VPM8 179 aa2.03□□□□□ -2.08
BLS1YLR408C PHO85P17157 305 aa2.03□□□□□ -2.08
BLS1YLR408C YPK2P18961 677 aa2.03□□□□□ -2.08
BLS1YLR408C UBC12P52491 188 aa2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms