RNA–Protein interactions for RNA: YJR102C

VPS25, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS25, Length 609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS25YJR102C HTB1P02293 131 aaKnown RBP1.74□□□□□ -2.13
VPS25YJR102C HTB2P02294 131 aa1.74□□□□□ -2.13
VPS25YJR102C QCR8P08525 94 aa1.74□□□□□ -2.13
VPS25YJR102C RPL2AP0CX45 254 aaKnown RBP1.74□□□□□ -2.13
VPS25YJR102C RPL2BP0CX46 254 aaKnown RBP1.74□□□□□ -2.13
VPS25YJR102C RPB4P20433 221 aaPredicted RBP1.74□□□□□ -2.13
VPS25YJR102C TMA19P35691 167 aaKnown RBP1.74□□□□□ -2.13
VPS25YJR102C YCR087C-AP37263 153 aa1.74□□□□□ -2.13
VPS25YJR102C ERJ5P43613 295 aaPredicted RBP1.74□□□□□ -2.13
VPS25YJR102C NUP49Q02199 472 aa1.74□□□□□ -2.13
VPS25YJR102C ANT1Q06497 328 aa1.74□□□□□ -2.13
VPS25YJR102C FSF1Q12029 327 aaKnown RBP1.74□□□□□ -2.13
VPS25YJR102C CYR1P08678 2026 aaKnown RBP1.73□□□□□ -2.13
VPS25YJR102C CPA1P07258 411 aaKnown RBP1.73□□□□□ -2.13
VPS25YJR102C RPB3P16370 318 aaKnown RBP1.73□□□□□ -2.13
VPS25YJR102C CKS1P20486 150 aaKnown RBP1.73□□□□□ -2.13
VPS25YJR102C MAG1P22134 296 aaKnown RBP1.73□□□□□ -2.13
VPS25YJR102C YBR285WP38354 144 aa1.73□□□□□ -2.13
VPS25YJR102C GPA2P10823 449 aa1.72□□□□□ -2.13
VPS25YJR102C CBF1P17106 351 aa1.72□□□□□ -2.13
VPS25YJR102C RFA3P26755 122 aaKnown RBP1.72□□□□□ -2.13
VPS25YJR102C TFC1P32367 649 aa1.72□□□□□ -2.13
VPS25YJR102C YBR209WP38311 105 aa1.72□□□□□ -2.13
VPS25YJR102C HMF1P40037 129 aaKnown RBP1.72□□□□□ -2.13
VPS25YJR102C AIM25P47140 327 aa1.72□□□□□ -2.13
VPS25YJR102C ATG40Q99325 256 aa1.72□□□□□ -2.13
VPS25YJR102C COG5P53951 403 aa1.71□□□□□ -2.14
VPS25YJR102C ATP15P21306 62 aa1.7□□□□□ -2.14
VPS25YJR102C YKT6P36015 200 aaKnown RBP1.7□□□□□ -2.14
VPS25YJR102C RFC4P40339 323 aaKnown RBP1.7□□□□□ -2.14
VPS25YJR102C KNH1P50112 268 aa1.7□□□□□ -2.14
VPS25YJR102C MZM1Q03429 123 aaPredicted RBP1.7□□□□□ -2.14
VPS25YJR102C YMR226CQ05016 267 aaKnown RBP1.7□□□□□ -2.14
VPS25YJR102C IKI3Q06706 1349 aaKnown RBP1.69□□□□□ -2.14
VPS25YJR102C YLR236CA0A023PZG4 107 aa1.69□□□□□ -2.14
VPS25YJR102C MATALPHA2P0CY08 210 aa1.69□□□□□ -2.14
VPS25YJR102C HMLALPHA2P0CY09 210 aa1.69□□□□□ -2.14
VPS25YJR102C UPS2P35200 230 aa1.69□□□□□ -2.14
VPS25YJR102C CWC21Q03375 135 aaKnown RBP1.69□□□□□ -2.14
VPS25YJR102C SIR2P06700 562 aa1.68□□□□□ -2.14
VPS25YJR102C CUS2P53830 285 aaPredicted RBP1.68□□□□□ -2.14
VPS25YJR102C POP3P53833 195 aaPredicted RBP1.68□□□□□ -2.14
VPS25YJR102C HNT1Q04344 158 aaKnown RBP1.68□□□□□ -2.14
VPS25YJR102C JIP3O13555 125 aa1.67□□□□□ -2.14
VPS25YJR102C RPL27AP0C2H6 136 aaKnown RBP1.67□□□□□ -2.14
VPS25YJR102C SHE2P36068 246 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
VPS25YJR102C TVP38P36164 337 aa1.67□□□□□ -2.14
VPS25YJR102C TVP23P38962 199 aa1.67□□□□□ -2.14
VPS25YJR102C CGR1P53188 120 aa1.67□□□□□ -2.14
VPS25YJR102C CUE4Q04201 117 aaPredicted RBP1.67□□□□□ -2.14
VPS25YJR102C YNG1Q08465 219 aa1.67□□□□□ -2.14
VPS25YJR102C RAD28Q12021 506 aa1.67□□□□□ -2.14
VPS25YJR102C RIO1Q12196 484 aaKnown RBP1.67□□□□□ -2.14
VPS25YJR102C YDL180WQ12301 547 aa1.67□□□□□ -2.14
VPS25YJR102C GET1P53192 235 aa1.66□□□□□ -2.14
VPS25YJR102C OPY1P38271 328 aa1.65□□□□□ -2.15
VPS25YJR102C MMS2P53152 137 aa1.65□□□□□ -2.15
VPS25YJR102C FUS2Q05670 677 aa1.65□□□□□ -2.15
VPS25YJR102C SEC11P15367 167 aa1.64□□□□□ -2.15
VPS25YJR102C YCR090CP25654 182 aaKnown RBP1.64□□□□□ -2.15
VPS25YJR102C AIM2P39721 246 aa1.64□□□□□ -2.15
VPS25YJR102C MRPS17Q03246 237 aaPredicted RBP1.64□□□□□ -2.15
VPS25YJR102C GRX3Q03835 250 aa1.64□□□□□ -2.15
VPS25YJR102C GET4Q12125 312 aa1.64□□□□□ -2.15
VPS25YJR102C ADF1Q2V2Q1 113 aa1.64□□□□□ -2.15
VPS25YJR102C MSB2P32334 1306 aa1.64□□□□□ -2.15
VPS25YJR102C KDX1P36005 433 aa1.63□□□□□ -2.15
VPS25YJR102C PAN3P36102 679 aaPredicted RBP1.63□□□□□ -2.15
VPS25YJR102C MPA43P53583 542 aaPredicted RBP1.63□□□□□ -2.15
VPS25YJR102C YCL012CQ8J0M4 134 aa1.63□□□□□ -2.15
VPS25YJR102C MBF1O14467 151 aaKnown RBP1.62□□□□□ -2.15
VPS25YJR102C POR1P04840 283 aaKnown RBP1.62□□□□□ -2.15
VPS25YJR102C OCH1P31755 480 aa1.62□□□□□ -2.15
VPS25YJR102C ERG10P41338 398 aaKnown RBP1.62□□□□□ -2.15
VPS25YJR102C NOP19P53317 196 aaPredicted RBP1.62□□□□□ -2.15
VPS25YJR102C GGA1Q06336 557 aa1.62□□□□□ -2.15
VPS25YJR102C YNL146C-AQ3E7Z1 64 aa1.62□□□□□ -2.15
VPS25YJR102C ODC2Q99297 307 aa1.62□□□□□ -2.15
VPS25YJR102C MRS1P07266 363 aa1.61□□□□□ -2.15
VPS25YJR102C SPO13P23624 291 aa1.61□□□□□ -2.15
VPS25YJR102C VMA22P38784 181 aa1.61□□□□□ -2.15
VPS25YJR102C YER076CP40049 302 aa1.61□□□□□ -2.15
VPS25YJR102C MPC3P53311 146 aa1.61□□□□□ -2.15
VPS25YJR102C ABP140Q08641 628 aaKnown RBP1.61□□□□□ -2.15
VPS25YJR102C YEA4P40004 342 aa1.6□□□□□ -2.15
VPS25YJR102C RIO2P40160 425 aaKnown RBP1.6□□□□□ -2.15
VPS25YJR102C YPL073CP40323 161 aa1.6□□□□□ -2.15
VPS25YJR102C YPR174CQ06616 221 aaPredicted RBP1.6□□□□□ -2.15
VPS25YJR102C YHR007C-AQ07074 71 aa1.6□□□□□ -2.15
VPS25YJR102C DGA1Q08650 418 aa1.6□□□□□ -2.15
VPS25YJR102C IGO2Q9P305 131 aa1.6□□□□□ -2.15
VPS25YJR102C QCR7P00128 127 aa1.59□□□□□ -2.15
VPS25YJR102C CNB1P25296 175 aa1.59□□□□□ -2.15
VPS25YJR102C ECM4P36156 370 aa1.59□□□□□ -2.15
VPS25YJR102C UBC7Q02159 165 aa1.59□□□□□ -2.15
VPS25YJR102C RAD9P14737 1309 aa1.59□□□□□ -2.16
VPS25YJR102C ASF2P32448 525 aaPredicted RBP1.58□□□□□ -2.16
VPS25YJR102C YER034WP40022 185 aaKnown RBP1.58□□□□□ -2.16
VPS25YJR102C SER2P42941 309 aa1.58□□□□□ -2.16
VPS25YJR102C ARP3P47117 449 aaKnown RBP1.58□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms