RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C PRS5Q12265 496 aaKnown RBP1.96□□□□□ -2.1
SSD1YDR293C YGL258W-AQ3E740 77 aa1.96□□□□□ -2.1
SSD1YDR293C BGL2P15703 313 aaKnown RBP1.95□□□□□ -2.1
SSD1YDR293C PPA2P28239 310 aa1.95□□□□□ -2.1
SSD1YDR293C LAC1P28496 418 aa1.95□□□□□ -2.1
SSD1YDR293C SOR1P35497 357 aaKnown RBP1.95□□□□□ -2.1
SSD1YDR293C GRE3P38715 327 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
SSD1YDR293C OTU1P43558 301 aa1.95□□□□□ -2.1
SSD1YDR293C YGL159WP53110 370 aa1.95□□□□□ -2.1
SSD1YDR293C MPA43P53583 542 aaPredicted RBP1.95□□□□□ -2.1
SSD1YDR293C RCE1Q03530 315 aa1.95□□□□□ -2.1
SSD1YDR293C YDR415CQ04033 374 aaPredicted RBP1.95□□□□□ -2.1
SSD1YDR293C SOR2Q07786 357 aa1.95□□□□□ -2.1
SSD1YDR293C MED7Q08278 222 aa1.95□□□□□ -2.1
SSD1YDR293C SPO24Q3E752 67 aa1.95□□□□□ -2.1
SSD1YDR293C YLR415CO13578 112 aa1.95□□□□□ -2.1
SSD1YDR293C ILV5P06168 395 aaKnown RBP1.95□□□□□ -2.1
SSD1YDR293C ADK1P07170 222 aaKnown RBP1.95□□□□□ -2.1
SSD1YDR293C RPS25BP0C0T4 108 aaKnown RBP1.95□□□□□ -2.1
SSD1YDR293C YFR010W-AP0C5N0 62 aa1.95□□□□□ -2.1
SSD1YDR293C HMRA1P0CY11 126 aa1.95□□□□□ -2.1
SSD1YDR293C MRPL20P22354 195 aaPredicted RBP1.95□□□□□ -2.1
SSD1YDR293C YIR035CP40579 254 aa1.95□□□□□ -2.1
SSD1YDR293C LYS20P48570 428 aaKnown RBP1.95□□□□□ -2.1
SSD1YDR293C YGR066CP53242 292 aa1.95□□□□□ -2.1
SSD1YDR293C RRS1Q08746 203 aaKnown RBP1.95□□□□□ -2.1
SSD1YDR293C ATP14Q12349 124 aa1.95□□□□□ -2.1
SSD1YDR293C MRPL23Q12487 163 aaPredicted RBP1.95□□□□□ -2.1
SSD1YDR293C RPS25AQ3E792 108 aaPredicted RBP1.95□□□□□ -2.1
SSD1YDR293C YPR108W-AQ3E7B3 70 aa1.95□□□□□ -2.1
SSD1YDR293C YHR214C-EQ8TGK0 99 aa1.95□□□□□ -2.1
SSD1YDR293C RPL25P04456 142 aaKnown RBP1.95□□□□□ -2.1
SSD1YDR293C GRX2P17695 143 aaKnown RBP1.95□□□□□ -2.1
SSD1YDR293C APA2P22108 325 aa1.95□□□□□ -2.1
SSD1YDR293C YCR100CP25606 316 aa1.95□□□□□ -2.1
SSD1YDR293C ALK2P32789 676 aaPredicted RBP1.95□□□□□ -2.1
SSD1YDR293C IMD2P38697 523 aaKnown RBP1.95□□□□□ -2.1
SSD1YDR293C PTH1P38876 190 aaKnown RBP1.95□□□□□ -2.1
SSD1YDR293C PCL7P40186 285 aa1.95□□□□□ -2.1
SSD1YDR293C PIG2P40187 538 aa1.95□□□□□ -2.1
SSD1YDR293C TIR3P40552 269 aa1.95□□□□□ -2.1
SSD1YDR293C REE1P40893 198 aa1.95□□□□□ -2.1
SSD1YDR293C GPI2P46961 280 aa1.95□□□□□ -2.1
SSD1YDR293C TAD2P47058 250 aa1.95□□□□□ -2.1
SSD1YDR293C TTI2P47168 421 aa1.95□□□□□ -2.1
SSD1YDR293C SNN1P48232 102 aa1.95□□□□□ -2.1
SSD1YDR293C TPC1P53257 314 aa1.95□□□□□ -2.1
SSD1YDR293C PAU4P53427 120 aa1.95□□□□□ -2.1
SSD1YDR293C SUN4P53616 420 aa1.95□□□□□ -2.1
SSD1YDR293C SMM1P53720 384 aaKnown RBP1.95□□□□□ -2.1
SSD1YDR293C PDR17P53844 350 aa1.95□□□□□ -2.1
SSD1YDR293C RNH201P53942 307 aa1.95□□□□□ -2.1
SSD1YDR293C NGL2Q03264 515 aaKnown RBP1.95□□□□□ -2.1
SSD1YDR293C SDH7Q04401 133 aa1.95□□□□□ -2.1
SSD1YDR293C AVO2Q04749 426 aa1.95□□□□□ -2.1
SSD1YDR293C TMA10Q06177 86 aa1.95□□□□□ -2.1
SSD1YDR293C CNL1Q06333 122 aa1.95□□□□□ -2.1
SSD1YDR293C ARR2Q06597 130 aa1.95□□□□□ -2.1
SSD1YDR293C POM34Q12445 299 aa1.95□□□□□ -2.1
SSD1YDR293C TOM1Q03280 3268 aa1.94□□□□□ -2.1
SSD1YDR293C HTB1P02293 131 aaKnown RBP1.94□□□□□ -2.1
SSD1YDR293C OPI3P05375 206 aa1.94□□□□□ -2.1
SSD1YDR293C RPS13P05756 151 aaKnown RBP1.94□□□□□ -2.1
SSD1YDR293C PAU1P0CE88 120 aa1.94□□□□□ -2.1
SSD1YDR293C PAU14P0CE89 120 aa1.94□□□□□ -2.1
SSD1YDR293C PAU6P0CE90 120 aa1.94□□□□□ -2.1
SSD1YDR293C PAU18P0CE91 120 aa1.94□□□□□ -2.1
SSD1YDR293C PAU8P0CE92 120 aa1.94□□□□□ -2.1
SSD1YDR293C PAU11P0CE93 120 aa1.94□□□□□ -2.1
SSD1YDR293C RPL35AP0CX84 120 aaKnown RBP1.94□□□□□ -2.1
SSD1YDR293C RPL35BP0CX85 120 aaKnown RBP1.94□□□□□ -2.1
SSD1YDR293C RNQ1P25367 405 aa1.94□□□□□ -2.1
SSD1YDR293C CDC50P25656 391 aa1.94□□□□□ -2.1
SSD1YDR293C POP5P28005 173 aa1.94□□□□□ -2.1
SSD1YDR293C RML2P32611 393 aa1.94□□□□□ -2.1
SSD1YDR293C PAU13P38725 120 aa1.94□□□□□ -2.1
SSD1YDR293C CTK2P46962 323 aa1.94□□□□□ -2.1
SSD1YDR293C YJL016WP47072 561 aa1.94□□□□□ -2.1
SSD1YDR293C PGU1P47180 361 aa1.94□□□□□ -2.1
SSD1YDR293C PAU10Q03050 120 aa1.94□□□□□ -2.1
SSD1YDR293C YMR252CQ04814 134 aa1.94□□□□□ -2.1
SSD1YDR293C RBS1Q05672 457 aaKnown RBP1.94□□□□□ -2.1
SSD1YDR293C PAU20Q08322 120 aa1.94□□□□□ -2.1
SSD1YDR293C YOR292CQ08743 309 aa1.94□□□□□ -2.1
SSD1YDR293C POM33Q12164 279 aa1.94□□□□□ -2.1
SSD1YDR293C YDL180WQ12301 547 aa1.94□□□□□ -2.1
SSD1YDR293C PAU9Q3E770 120 aa1.94□□□□□ -2.1
SSD1YDR293C MES1P00958 751 aaKnown RBP1.94□□□□□ -2.1
SSD1YDR293C NOP1P15646 327 aaKnown RBP1.94□□□□□ -2.1
SSD1YDR293C SPO13P23624 291 aa1.94□□□□□ -2.1
SSD1YDR293C GLC7P32598 312 aaKnown RBP1.94□□□□□ -2.1
SSD1YDR293C YBL010CP32788 280 aa1.94□□□□□ -2.1
SSD1YDR293C RPS27AP35997 82 aaKnown RBP1.94□□□□□ -2.1
SSD1YDR293C CMC1P36064 111 aa1.94□□□□□ -2.1
SSD1YDR293C AME1P38313 324 aa1.94□□□□□ -2.1
SSD1YDR293C RPS27BP38711 82 aa1.94□□□□□ -2.1
SSD1YDR293C PAU5P43575 122 aa1.94□□□□□ -2.1
SSD1YDR293C YMR279CQ03263 540 aa1.94□□□□□ -2.1
SSD1YDR293C YML079WQ03629 201 aa1.94□□□□□ -2.1
SSD1YDR293C ATC1Q04005 294 aa1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 53.8 ms