RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C CUS2P53830 285 aaPredicted RBP0.85□□□□□ -2.27
SWI5YDR146C GIS3Q12418 502 aa0.85□□□□□ -2.27
SWI5YDR146C YHR214C-EQ8TGK0 99 aa0.85□□□□□ -2.27
SWI5YDR146C YFR032C-BQ8TGU2 87 aa0.85□□□□□ -2.27
SWI5YDR146C ATG40Q99325 256 aa0.85□□□□□ -2.27
SWI5YDR146C SIR2P06700 562 aa0.85□□□□□ -2.27
SWI5YDR146C URA5P13298 226 aaKnown RBP0.85□□□□□ -2.27
SWI5YDR146C PTM1P32857 523 aa0.85□□□□□ -2.27
SWI5YDR146C AST2P39945 430 aaKnown RBP0.85□□□□□ -2.27
SWI5YDR146C YCL012CQ8J0M4 134 aa0.85□□□□□ -2.27
SWI5YDR146C MER1P16523 270 aa0.84□□□□□ -2.27
SWI5YDR146C BET1P22804 142 aa0.84□□□□□ -2.27
SWI5YDR146C SPS18P32572 300 aa0.84□□□□□ -2.27
SWI5YDR146C RMD6P39975 231 aa0.84□□□□□ -2.27
SWI5YDR146C ERG10P41338 398 aaKnown RBP0.84□□□□□ -2.27
SWI5YDR146C KNH1P50112 268 aa0.84□□□□□ -2.27
SWI5YDR146C RIO1Q12196 484 aaKnown RBP0.84□□□□□ -2.27
SWI5YDR146C FAS1P07149 2051 aaKnown RBP0.84□□□□□ -2.28
SWI5YDR146C YLR236CA0A023PZG4 107 aa0.83□□□□□ -2.28
SWI5YDR146C RPL27AP0C2H6 136 aaKnown RBP0.83□□□□□ -2.28
SWI5YDR146C GPA2P10823 449 aa0.83□□□□□ -2.28
SWI5YDR146C TFC1P32367 649 aa0.83□□□□□ -2.28
SWI5YDR146C SKG1P36169 355 aa0.83□□□□□ -2.28
SWI5YDR146C MPA43P53583 542 aaPredicted RBP0.83□□□□□ -2.28
SWI5YDR146C CPA1P07258 411 aaKnown RBP0.83□□□□□ -2.28
SWI5YDR146C RPB4P20433 221 aaPredicted RBP0.83□□□□□ -2.28
SWI5YDR146C OCH1P31755 480 aa0.83□□□□□ -2.28
SWI5YDR146C KDX1P36005 433 aa0.83□□□□□ -2.28
SWI5YDR146C YBR209WP38311 105 aa0.83□□□□□ -2.28
SWI5YDR146C YER034WP40022 185 aaKnown RBP0.83□□□□□ -2.28
SWI5YDR146C ERJ5P43613 295 aaPredicted RBP0.83□□□□□ -2.28
SWI5YDR146C EAF6P47128 113 aa0.83□□□□□ -2.28
SWI5YDR146C MPC3P53311 146 aa0.83□□□□□ -2.28
SWI5YDR146C YDR274CP87283 123 aa0.83□□□□□ -2.28
SWI5YDR146C CNB1P25296 175 aa0.82□□□□□ -2.28
SWI5YDR146C HMF1P40037 129 aaKnown RBP0.82□□□□□ -2.28
SWI5YDR146C YER076CP40049 302 aa0.82□□□□□ -2.28
SWI5YDR146C SAY1P53324 424 aa0.82□□□□□ -2.28
SWI5YDR146C BNA7Q04066 261 aa0.82□□□□□ -2.28
SWI5YDR146C YOL160WQ08321 113 aa0.82□□□□□ -2.28
SWI5YDR146C MET5P47169 1442 aa0.82□□□□□ -2.28
SWI5YDR146C IKI3Q06706 1349 aaKnown RBP0.82□□□□□ -2.28
SWI5YDR146C RPL25P04456 142 aaKnown RBP0.82□□□□□ -2.28
SWI5YDR146C CDC36P06100 191 aaPredicted RBP0.82□□□□□ -2.28
SWI5YDR146C SEC11P15367 167 aa0.82□□□□□ -2.28
SWI5YDR146C SKI6P46948 246 aaPredicted RBP0.82□□□□□ -2.28
SWI5YDR146C ODC2Q99297 307 aa0.82□□□□□ -2.28
SWI5YDR146C HTB1P02293 131 aaKnown RBP0.81□□□□□ -2.28
SWI5YDR146C HTB2P02294 131 aa0.81□□□□□ -2.28
SWI5YDR146C ASF2P32448 525 aaPredicted RBP0.81□□□□□ -2.28
SWI5YDR146C YKT6P36015 200 aaKnown RBP0.81□□□□□ -2.28
SWI5YDR146C FMP23P38231 175 aa0.81□□□□□ -2.28
SWI5YDR146C OPY1P38271 328 aa0.81□□□□□ -2.28
SWI5YDR146C TRM5P38793 499 aa0.81□□□□□ -2.28
SWI5YDR146C UBC7Q02159 165 aa0.81□□□□□ -2.28
SWI5YDR146C ABP140Q08641 628 aaKnown RBP0.81□□□□□ -2.28
SWI5YDR146C PHO85P17157 305 aa0.8□□□□□ -2.28
SWI5YDR146C SPO13P23624 291 aa0.8□□□□□ -2.28
SWI5YDR146C NTG1P31378 399 aa0.8□□□□□ -2.28
SWI5YDR146C YAE1P47118 141 aaPredicted RBP0.8□□□□□ -2.28
SWI5YDR146C AIM25P47140 327 aa0.8□□□□□ -2.28
SWI5YDR146C GRX3Q03835 250 aa0.8□□□□□ -2.28
SWI5YDR146C HNT1Q04344 158 aaKnown RBP0.8□□□□□ -2.28
SWI5YDR146C YDL180WQ12301 547 aa0.8□□□□□ -2.28
SWI5YDR146C ADF1Q2V2Q1 113 aa0.8□□□□□ -2.28
SWI5YDR146C QCR7P00128 127 aa0.8□□□□□ -2.28
SWI5YDR146C QCR8P08525 94 aa0.8□□□□□ -2.28
SWI5YDR146C AQY2P0CD90 149 aa0.8□□□□□ -2.28
SWI5YDR146C TVP38P36164 337 aa0.8□□□□□ -2.28
SWI5YDR146C NOP19P53317 196 aaPredicted RBP0.8□□□□□ -2.28
SWI5YDR146C CUE4Q04201 117 aaPredicted RBP0.8□□□□□ -2.28
SWI5YDR146C MRS1P07266 363 aa0.79□□□□□ -2.28
SWI5YDR146C CKS1P20486 150 aaKnown RBP0.79□□□□□ -2.28
SWI5YDR146C RFC4P40339 323 aaKnown RBP0.79□□□□□ -2.28
SWI5YDR146C FLX1P40464 311 aa0.79□□□□□ -2.28
SWI5YDR146C ARP3P47117 449 aaKnown RBP0.79□□□□□ -2.28
SWI5YDR146C YNL247WP53852 767 aaKnown RBP0.79□□□□□ -2.28
SWI5YDR146C MDM32Q12171 622 aa0.79□□□□□ -2.28
SWI5YDR146C MSB2P32334 1306 aa0.79□□□□□ -2.28
SWI5YDR146C POR1P04840 283 aaKnown RBP0.79□□□□□ -2.28
SWI5YDR146C PAN3P36102 679 aaPredicted RBP0.79□□□□□ -2.28
SWI5YDR146C UBC12P52491 188 aa0.79□□□□□ -2.28
SWI5YDR146C MRPS17Q03246 237 aaPredicted RBP0.79□□□□□ -2.28
SWI5YDR146C YMR226CQ05016 267 aaKnown RBP0.79□□□□□ -2.28
SWI5YDR146C DGA1Q08650 418 aa0.79□□□□□ -2.28
SWI5YDR146C RAD28Q12021 506 aa0.79□□□□□ -2.28
SWI5YDR146C MBF1O14467 151 aaKnown RBP0.78□□□□□ -2.28
SWI5YDR146C VAR1P02381 398 aa0.78□□□□□ -2.28
SWI5YDR146C YEA4P40004 342 aa0.78□□□□□ -2.28
SWI5YDR146C SER2P42941 309 aa0.78□□□□□ -2.28
SWI5YDR146C MMS2P53152 137 aa0.78□□□□□ -2.28
SWI5YDR146C GET4Q12125 312 aa0.78□□□□□ -2.28
SWI5YDR146C YNL146C-AQ3E7Z1 64 aa0.78□□□□□ -2.28
SWI5YDR146C YAR023CD6VPM8 179 aa0.77□□□□□ -2.29
SWI5YDR146C MATALPHA2P0CY08 210 aa0.77□□□□□ -2.29
SWI5YDR146C HMLALPHA2P0CY09 210 aa0.77□□□□□ -2.29
SWI5YDR146C CBF1P17106 351 aa0.77□□□□□ -2.29
SWI5YDR146C YCR090CP25654 182 aaKnown RBP0.77□□□□□ -2.29
SWI5YDR146C RIO2P40160 425 aaKnown RBP0.77□□□□□ -2.29
SWI5YDR146C GET1P53192 235 aa0.77□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 138.2 ms