RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 FBXO40Q9UH90 709 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 ZC3H4Q9UPT8 1303 aaKnown RBP9.55□□□□□ -0.88
CSMD1-218ENST00000635120 SMTNL2Q2TAL5 461 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 RCSD1Q6JBY9 416 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 CLTCQ00610 1675 aaKnown RBP9.55□□□□□ -0.88
CSMD1-218ENST00000635120 A0A1W2PQC6 194 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 NDUFS3O75489 264 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 UBTFL6P0CB48 400 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-218ENST00000635120 PLA2G4AP47712 749 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 SUSD4Q5VX71 490 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 LVRNQ6Q4G3 990 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 PCYOX1LQ8NBM8 494 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 ZNF560Q96MR9 790 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 RBM12Q9NTZ6 932 aaKnown RBP9.55□□□□□ -0.88
CSMD1-218ENST00000635120 CAB39Q9Y376 341 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-218ENST00000635120 ZNF335Q9H4Z2 1342 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-218ENST00000635120 YWHABP31946 246 aaKnown RBP9.55□□□□□ -0.88
CSMD1-218ENST00000635120 ZNF200P98182 395 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-218ENST00000635120 RAD51Q06609 339 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 ADCK2Q7Z695 626 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 WDR48Q8TAF3 677 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 SMARCAL1Q9NZC9 954 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 TRIM10Q9UDY6 481 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 CHMP2BQ9UQN3 213 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 FOXP2O15409 715 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 DEFA1P59665 94 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 DEFA3P59666 94 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 TRADDQ15628 312 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 AASDHQ4L235 1098 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-218ENST00000635120 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-218ENST00000635120 VPS50Q96JG6 964 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 CNBD2Q96M20 576 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 ZFP42Q96MM3 310 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 RHBDL2Q9NX52 303 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 MPP6Q9NZW5 540 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 MTM1Q13496 603 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 EPHA10Q5JZY3 1008 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 RTKN2Q8IZC4 609 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 TNIP2Q8NFZ5 429 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 QTRT2Q9H974 415 aaKnown RBP9.54□□□□□ -0.88
CSMD1-218ENST00000635120 HLFQ16534 295 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 DDX42Q86XP3 938 aaKnown RBP eCLIP9.54□□□□□ -0.88
CSMD1-218ENST00000635120 TMEM117Q9H0C3 514 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 NEU2Q9Y3R4 380 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 CAMSAP1Q5T5Y3 1602 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 NBNO60934 754 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 KRT75O95678 551 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 DSG1Q02413 1049 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 NCOA4Q13772 614 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 TASP1Q9H6P5 420 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 TPRP12270 2363 aaKnown RBP9.54□□□□□ -0.88
CSMD1-218ENST00000635120 TMEM120BA0PK00 339 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 SRP72O76094 671 aaKnown RBP9.54□□□□□ -0.88
CSMD1-218ENST00000635120 ZNF513Q8N8E2 541 aaPredicted RBP9.54□□□□□ -0.88
CSMD1-218ENST00000635120 CDY2AQ9Y6F7 541 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 CDY1Q9Y6F8 540 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 FMO5P49326 533 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 MTHFD1LQ6UB35 978 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 CCDC103Q8IW40 242 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 NSMCE4AQ9NXX6 385 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 MTO1Q9Y2Z2 717 aaKnown RBP9.54□□□□□ -0.88
CSMD1-218ENST00000635120 ZNF197O14709 1029 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 PRDX5P30044 214 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 GPSM2P81274 684 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 PWP1Q13610 501 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 VEPH1Q14D04 833 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 KCNK16Q96T55 309 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 CHP1Q99653 195 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 FAM118BQ9BPY3 351 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 HOXC10Q9NYD6 342 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 ABCA6Q8N139 1617 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 RGS7P49802 495 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 WNK4Q96J92 1243 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 APOL5Q9BWW9 433 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 E9PCH4 1651 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 ZBTB39O15060 712 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 DLGAP3O95886 979 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 CCND1P24385 295 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 NT5C2P49902 561 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 GTF2H3Q13889 308 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 RNF149Q8NC42 400 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 DDX50Q9BQ39 737 aaKnown RBP9.54□□□□□ -0.88
CSMD1-218ENST00000635120 BRD8Q9H0E9 1235 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 TMEM94Q12767 1356 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 SCP2P22307 547 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 TWF1Q12792 350 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 KYAT1Q16773 422 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 UGP2Q16851 508 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 EFHBQ8N7U6 833 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 SH3TC2Q8TF17 1288 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 KCNF1Q9H3M0 494 aa9.54□□□□□ -0.88
CSMD1-218ENST00000635120 RNF17Q9BXT8 1623 aaKnown RBP9.53□□□□□ -0.88
CSMD1-218ENST00000635120 A0A1B0GTH6 734 aa9.53□□□□□ -0.88
CSMD1-218ENST00000635120 KRT16P08779 473 aa9.53□□□□□ -0.88
CSMD1-218ENST00000635120 CPB1P15086 417 aa9.53□□□□□ -0.88
CSMD1-218ENST00000635120 NMT1P30419 496 aaKnown RBP9.53□□□□□ -0.88
CSMD1-218ENST00000635120 MLH1P40692 756 aa9.53□□□□□ -0.88
CSMD1-218ENST00000635120 KCNB1Q14721 858 aa9.53□□□□□ -0.88
CSMD1-218ENST00000635120 TBC1D19Q8N5T2 526 aa9.53□□□□□ -0.88
CSMD1-218ENST00000635120 EXOSC4Q9NPD3 245 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms