RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 GOLGA8KD6RF30 607 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 CNPP09543 421 aaKnown RBP6.59□□□□□ -1.35
CDKL5-205ENST00000623535 PPP2R1BP30154 601 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 SOAT1P35610 550 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 NRG3P56975 720 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 CACNB2Q08289 660 aaPredicted RBP6.59□□□□□ -1.35
CDKL5-205ENST00000623535 NNTQ13423 1086 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 CENPUQ71F23 418 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 DGKHQ86XP1 1220 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 DSELQ8IZU8 1212 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 FAM98AQ8NCA5 519 aaKnown RBP6.59□□□□□ -1.35
CDKL5-205ENST00000623535 NEDD1Q8NHV4 660 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 METTL21AQ8WXB1 218 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 ING2Q9H160 280 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 AOX1Q06278 1338 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 A0A1B0GUA9 196 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 TOM1L1O75674 476 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 HSD17B3P37058 310 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 ELK3P41970 407 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 EYA1Q99502 592 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 ESYT1Q9BSJ8 1104 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 BHMT2Q9H2M3 363 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 MRPL17Q9NRX2 175 aaKnown RBP6.59□□□□□ -1.35
CDKL5-205ENST00000623535 SPASTQ9UBP0 616 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 METP08581 1390 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 TMEM88BA6NKF7 163 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 MAPK1P28482 360 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 MZF1P28698 734 aaPredicted RBP6.59□□□□□ -1.35
CDKL5-205ENST00000623535 PSMC1P62191 440 aaKnown RBP6.59□□□□□ -1.35
CDKL5-205ENST00000623535 SLFN5Q08AF3 891 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 DMC1Q14565 340 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 STYK1Q6J9G0 422 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 LAYNQ6UX15 382 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 SP8Q8IXZ3 490 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 CCDC185Q8N715 623 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 PAGE5Q96GU1 130 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 PACSIN1Q9BY11 444 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 NSMCE4AQ9NXX6 385 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 HBS1LQ9Y450 684 aaKnown RBP6.59□□□□□ -1.35
CDKL5-205ENST00000623535 SNX5Q9Y5X3 404 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 UGGT2Q9NYU1 1516 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 DDX3XO00571 662 aaKnown RBP eCLIP6.59□□□□□ -1.35
CDKL5-205ENST00000623535 PSIP1O75475 530 aaKnown RBP6.59□□□□□ -1.35
CDKL5-205ENST00000623535 FGFR2P21802 821 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 RFX3P48380 749 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 EPHA10Q5JZY3 1008 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 MOV10L1Q9BXT6 1211 aaKnown RBP6.59□□□□□ -1.35
CDKL5-205ENST00000623535 MRPS26Q9BYN8 205 aaKnown RBP6.59□□□□□ -1.35
CDKL5-205ENST00000623535 CAPN11Q9UMQ6 739 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 TADA3O75528 432 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 PDE1AP54750 535 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 PPP1R18Q6NYC8 613 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 NRSN1Q8IZ57 195 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 PIP4K2CQ8TBX8 421 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 GHRLQ9UBU3 117 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 RBP3P10745 1247 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 RENBPP51606 427 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 SMU1Q2TAY7 513 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 PUS10Q3MIT2 529 aaKnown RBP6.59□□□□□ -1.35
CDKL5-205ENST00000623535 ATAD3BQ5T9A4 648 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 TYW1BQ6NUM6 668 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 NEK5Q6P3R8 708 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 C16orf59Q7L2K0 433 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 ARHGEF19Q8IW93 802 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 MANSC1Q9H8J5 431 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 GTSE1Q9NYZ3 720 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 NOX1Q9Y5S8 564 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 STK36Q9NRP7 1315 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 TRPA1O75762 1119 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 AP2B1P63010 937 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 USP4Q13107 963 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 EDRF1Q3B7T1 1238 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 SH3GL3Q99963 347 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 BRD9Q9H8M2 597 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 POLMQ9NP87 494 aaPredicted RBP6.59□□□□□ -1.35
CDKL5-205ENST00000623535 PCDHA4Q9UN74 947 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 MAPK8IP1Q9UQF2 711 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 NUP107P57740 925 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 ZNHIT3Q15649 155 aaPredicted RBP6.59□□□□□ -1.35
CDKL5-205ENST00000623535 P3H1Q32P28 736 aa6.59□□□□□ -1.35
CDKL5-205ENST00000623535 C1orf131Q8NDD1 294 aaKnown RBP6.59□□□□□ -1.35
CDKL5-205ENST00000623535 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.59□□□□□ -1.35
CDKL5-205ENST00000623535 MRPS23Q9Y3D9 190 aaKnown RBP6.59□□□□□ -1.35
CDKL5-205ENST00000623535 TBKBP1A7MCY6 615 aa6.59□□□□□ -1.36
CDKL5-205ENST00000623535 F8W810 466 aa6.59□□□□□ -1.36
CDKL5-205ENST00000623535 CHUKO15111 745 aa6.59□□□□□ -1.36
CDKL5-205ENST00000623535 POLR2EP19388 210 aaKnown RBP6.59□□□□□ -1.36
CDKL5-205ENST00000623535 SELENOVP59797 346 aa6.59□□□□□ -1.36
CDKL5-205ENST00000623535 MTMR2Q13614 643 aa6.59□□□□□ -1.36
CDKL5-205ENST00000623535 XKR4Q5GH76 650 aa6.59□□□□□ -1.36
CDKL5-205ENST00000623535 OLFML2BQ68BL8 750 aa6.59□□□□□ -1.36
CDKL5-205ENST00000623535 CENPTQ96BT3 561 aa6.59□□□□□ -1.36
CDKL5-205ENST00000623535 NCOA5Q9HCD5 579 aaKnown RBP6.59□□□□□ -1.36
CDKL5-205ENST00000623535 ZNF112Q9UJU3 913 aa6.59□□□□□ -1.36
CDKL5-205ENST00000623535 ATP8A1Q9Y2Q0 1164 aa6.59□□□□□ -1.36
CDKL5-205ENST00000623535 ABCC12Q96J65 1359 aa6.59□□□□□ -1.36
CDKL5-205ENST00000623535 MAN1A2O60476 641 aa6.59□□□□□ -1.36
CDKL5-205ENST00000623535 RTN3O95197 1032 aaPredicted RBP6.59□□□□□ -1.36
CDKL5-205ENST00000623535 TLX1P31314 330 aaPredicted RBP6.59□□□□□ -1.36
CDKL5-205ENST00000623535 SLC16A1P53985 500 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms