RNA–Protein interactions for RNA: ENST00000621708.4

PCDH15-233, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCDH15, Length 5,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-233ENST00000621708 AP1B1Q10567 949 aa9.22□□□□□ -0.93
PCDH15-233ENST00000621708 GPS1Q13098 491 aa9.22□□□□□ -0.93
PCDH15-233ENST00000621708 SPARCL1Q14515 664 aa9.22□□□□□ -0.93
PCDH15-233ENST00000621708 TDRD10Q5VZ19 366 aaKnown RBP9.22□□□□□ -0.93
PCDH15-233ENST00000621708 RSRC1Q96IZ7 334 aaKnown RBP9.22□□□□□ -0.93
PCDH15-233ENST00000621708 CHP1Q99653 195 aa9.22□□□□□ -0.93
PCDH15-233ENST00000621708 USH1CQ9Y6N9 552 aa9.22□□□□□ -0.93
PCDH15-233ENST00000621708 DLG5Q8TDM6 1919 aa9.21□□□□□ -0.93
PCDH15-233ENST00000621708 UNCXA6NJT0 531 aa9.21□□□□□ -0.93
PCDH15-233ENST00000621708 PRRG1O14668 218 aa9.21□□□□□ -0.93
PCDH15-233ENST00000621708 ADCY3O60266 1144 aa9.21□□□□□ -0.93
PCDH15-233ENST00000621708 THP07101 528 aa9.21□□□□□ -0.93
PCDH15-233ENST00000621708 ITIH2P19823 946 aa9.21□□□□□ -0.93
PCDH15-233ENST00000621708 ZNF280AP59817 542 aaPredicted RBP9.21□□□□□ -0.93
PCDH15-233ENST00000621708 CELF3Q5SZQ8 465 aaKnown RBP9.21□□□□□ -0.93
PCDH15-233ENST00000621708 SLC27A1Q6PCB7 646 aa9.21□□□□□ -0.93
PCDH15-233ENST00000621708 PLPPR4Q7Z2D5 763 aa9.21□□□□□ -0.93
PCDH15-233ENST00000621708 GDAP1Q8TB36 358 aa9.21□□□□□ -0.93
PCDH15-233ENST00000621708 CPA5Q8WXQ8 436 aa9.21□□□□□ -0.93
PCDH15-233ENST00000621708 TMEM169Q96HH4 297 aa9.21□□□□□ -0.93
PCDH15-233ENST00000621708 TRAIPQ9BWF2 469 aa9.21□□□□□ -0.93
PCDH15-233ENST00000621708 MRPL9Q9BYD2 267 aaKnown RBP9.21□□□□□ -0.93
PCDH15-233ENST00000621708 SEMA6BQ9H3T3 888 aa9.21□□□□□ -0.93
PCDH15-233ENST00000621708 TRPV2Q9Y5S1 764 aa9.21□□□□□ -0.93
PCDH15-233ENST00000621708 CTIFO43310 598 aaKnown RBP9.21□□□□□ -0.93
PCDH15-233ENST00000621708 ZMYND10O75800 440 aa9.21□□□□□ -0.93
PCDH15-233ENST00000621708 SNHG28P0DPA3 235 aa9.21□□□□□ -0.93
PCDH15-233ENST00000621708 BCAT1P54687 386 aa9.21□□□□□ -0.93
PCDH15-233ENST00000621708 SLC7A5Q01650 507 aa9.21□□□□□ -0.93
PCDH15-233ENST00000621708 ST3GAL1Q11201 340 aa9.21□□□□□ -0.93
PCDH15-233ENST00000621708 SPATA4Q8NEY3 305 aa9.21□□□□□ -0.93
PCDH15-233ENST00000621708 ARHGEF26Q96DR7 871 aa9.21□□□□□ -0.93
PCDH15-233ENST00000621708 MCEEQ96PE7 176 aa9.21□□□□□ -0.93
PCDH15-233ENST00000621708 CDK5RAP1Q96SZ6 601 aaKnown RBP9.21□□□□□ -0.93
PCDH15-233ENST00000621708 HMX1Q9NP08 348 aaPredicted RBP9.21□□□□□ -0.93
PCDH15-233ENST00000621708 GPRC5CQ9NQ84 441 aa9.21□□□□□ -0.93
PCDH15-233ENST00000621708 SPDYE5A6NIY4 337 aa9.21□□□□□ -0.94
PCDH15-233ENST00000621708 COPEO14579 308 aa9.21□□□□□ -0.94
PCDH15-233ENST00000621708 ATP1A1P05023 1023 aaKnown RBP9.21□□□□□ -0.94
PCDH15-233ENST00000621708 ZNF211Q13398 564 aaPredicted RBP9.21□□□□□ -0.94
PCDH15-233ENST00000621708 STAT4Q14765 748 aa9.21□□□□□ -0.94
PCDH15-233ENST00000621708 IZUMO3Q5VZ72 239 aa9.21□□□□□ -0.94
PCDH15-233ENST00000621708 MAP4K3Q8IVH8 894 aa9.21□□□□□ -0.94
PCDH15-233ENST00000621708 MSL3Q8N5Y2 521 aaKnown RBP9.21□□□□□ -0.94
PCDH15-233ENST00000621708 WNK4Q96J92 1243 aa9.21□□□□□ -0.94
PCDH15-233ENST00000621708 TINF2Q9BSI4 451 aa9.21□□□□□ -0.94
PCDH15-233ENST00000621708 XPNPEP3Q9NQH7 507 aa9.21□□□□□ -0.94
PCDH15-233ENST00000621708 SMYD2Q9NRG4 433 aa9.21□□□□□ -0.94
PCDH15-233ENST00000621708 PLAAQ9Y263 795 aa9.21□□□□□ -0.94
PCDH15-233ENST00000621708 NID2Q14112 1375 aa9.21□□□□□ -0.94
PCDH15-233ENST00000621708 EEF2KO00418 725 aaKnown RBP9.21□□□□□ -0.94
PCDH15-233ENST00000621708 PSMD10O75832 226 aa9.21□□□□□ -0.94
PCDH15-233ENST00000621708 MOCS2O96007 188 aaPredicted RBP9.21□□□□□ -0.94
PCDH15-233ENST00000621708 NFE2Q16621 373 aaPredicted RBP9.21□□□□□ -0.94
PCDH15-233ENST00000621708 CBWD2Q8IUF1 395 aa9.21□□□□□ -0.94
PCDH15-233ENST00000621708 LMNTD2Q8IXW0 634 aa9.21□□□□□ -0.94
PCDH15-233ENST00000621708 ATP6V0D2Q8N8Y2 350 aa9.21□□□□□ -0.94
PCDH15-233ENST00000621708 TTC8Q8TAM2 541 aa9.21□□□□□ -0.94
PCDH15-233ENST00000621708 APBA2Q99767 749 aa9.21□□□□□ -0.94
PCDH15-233ENST00000621708 KIFC3Q9BVG8 833 aa9.21□□□□□ -0.94
PCDH15-233ENST00000621708 RASSF4Q9H2L5 321 aa9.21□□□□□ -0.94
PCDH15-233ENST00000621708 NSMCE4AQ9NXX6 385 aa9.21□□□□□ -0.94
PCDH15-233ENST00000621708 PAK5Q9P286 719 aa9.21□□□□□ -0.94
PCDH15-233ENST00000621708 NOVA2Q9UNW9 492 aaKnown RBP9.21□□□□□ -0.94
PCDH15-233ENST00000621708 NCK2O43639 380 aa9.2□□□□□ -0.94
PCDH15-233ENST00000621708 RTP1P59025 263 aa9.2□□□□□ -0.94
PCDH15-233ENST00000621708 PHLDB3Q6NSJ2 640 aa9.2□□□□□ -0.94
PCDH15-233ENST00000621708 GANCQ8TET4 914 aa9.2□□□□□ -0.94
PCDH15-233ENST00000621708 RRN3Q9NYV6 651 aa9.2□□□□□ -0.94
PCDH15-233ENST00000621708 NRCAMQ92823 1304 aa9.2□□□□□ -0.94
PCDH15-233ENST00000621708 PDGFRBP09619 1106 aa9.2□□□□□ -0.94
PCDH15-233ENST00000621708 ZBTB48P10074 688 aaPredicted RBP9.2□□□□□ -0.94
PCDH15-233ENST00000621708 SLC12A3P55017 1021 aa9.2□□□□□ -0.94
PCDH15-233ENST00000621708 MAP2K5Q13163 448 aa9.2□□□□□ -0.94
PCDH15-233ENST00000621708 PSMD6Q15008 389 aa9.2□□□□□ -0.94
PCDH15-233ENST00000621708 FSCN1Q16658 493 aaKnown RBP9.2□□□□□ -0.94
PCDH15-233ENST00000621708 ZSCAN26Q16670 478 aa9.2□□□□□ -0.94
PCDH15-233ENST00000621708 LY6KQ17RY6 165 aa9.2□□□□□ -0.94
PCDH15-233ENST00000621708 KSR1Q8IVT5 923 aa9.2□□□□□ -0.94
PCDH15-233ENST00000621708 ATPAF2Q8N5M1 289 aa9.2□□□□□ -0.94
PCDH15-233ENST00000621708 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.2□□□□□ -0.94
PCDH15-233ENST00000621708 MAGED2Q9UNF1 606 aaPredicted RBP9.2□□□□□ -0.94
PCDH15-233ENST00000621708 C3orf70A6NLC5 250 aaPredicted RBP9.2□□□□□ -0.94
PCDH15-233ENST00000621708 SRGAP2O75044 1071 aa9.2□□□□□ -0.94
PCDH15-233ENST00000621708 CD44P16070 742 aaKnown RBP9.2□□□□□ -0.94
PCDH15-233ENST00000621708 KPNA1P52294 538 aaPredicted RBP9.2□□□□□ -0.94
PCDH15-233ENST00000621708 TRMT10CQ7L0Y3 403 aaKnown RBP9.2□□□□□ -0.94
PCDH15-233ENST00000621708 PPHLN1Q8NEY8 458 aaKnown RBP9.2□□□□□ -0.94
PCDH15-233ENST00000621708 CBWD1Q9BRT8 395 aa9.2□□□□□ -0.94
PCDH15-233ENST00000621708 CARD9Q9H257 536 aa9.2□□□□□ -0.94
PCDH15-233ENST00000621708 COL1A2P08123 1366 aa9.2□□□□□ -0.94
PCDH15-233ENST00000621708 A0A087WZ62 844 aa9.2□□□□□ -0.94
PCDH15-233ENST00000621708 SEC31AO94979 1220 aaKnown RBP9.2□□□□□ -0.94
PCDH15-233ENST00000621708 ACSL3O95573 720 aa9.2□□□□□ -0.94
PCDH15-233ENST00000621708 LLGL1Q15334 1064 aa9.2□□□□□ -0.94
PCDH15-233ENST00000621708 E4F1Q66K89 784 aaPredicted RBP9.2□□□□□ -0.94
PCDH15-233ENST00000621708 KCTD16Q68DU8 428 aa9.2□□□□□ -0.94
PCDH15-233ENST00000621708 MTHFD1LQ6UB35 978 aa9.2□□□□□ -0.94
PCDH15-233ENST00000621708 ZDHHC17Q8IUH5 632 aa9.2□□□□□ -0.94
PCDH15-233ENST00000621708 BRSK2Q8IWQ3 736 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms