RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 SPRP35270 261 aaPredicted RBP4.79□□□□□ -1.64
CHD9-221ENST00000615216 CCZ1BP86790 482 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 CCZ1P86791 482 aaPredicted RBP4.79□□□□□ -1.64
CHD9-221ENST00000615216 EMC2Q15006 297 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 SPDYE7PQ495Y7 208 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 TRPM8Q7Z2W7 1104 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 TRIM69Q86WT6 500 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 MOV10L1Q9BXT6 1211 aaKnown RBP4.79□□□□□ -1.64
CHD9-221ENST00000615216 ISCUQ9H1K1 167 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 RUBCNLQ9H714 662 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 C17orf75Q9HAS0 396 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 SMARCAL1Q9NZC9 954 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 AIPL1Q9NZN9 384 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 LSM7Q9UK45 103 aaKnown RBP4.79□□□□□ -1.64
CHD9-221ENST00000615216 ESYT3A0FGR9 886 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 IRX1P78414 480 aaPredicted RBP4.79□□□□□ -1.64
CHD9-221ENST00000615216 E2F4Q16254 413 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 PPIL6Q8IXY8 311 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 STKLD1Q8NE28 680 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 PTPRN2Q92932 1015 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 ARL8AQ96BM9 186 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 CCT8L2Q96SF2 557 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 REEP2Q9BRK0 252 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 MTMR4Q9NYA4 1195 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 WHRNQ9P202 907 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 AMACRQ9UHK6 382 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 ITM2BQ9Y287 266 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 FAM32AQ9Y421 112 aaKnown RBP4.79□□□□□ -1.64
CHD9-221ENST00000615216 UBA6A0AVT1 1052 aaPredicted RBP4.78□□□□□ -1.64
CHD9-221ENST00000615216 LRRIQ3A6PVS8 624 aaPredicted RBP4.78□□□□□ -1.64
CHD9-221ENST00000615216 EEF2KO00418 725 aaKnown RBP4.78□□□□□ -1.64
CHD9-221ENST00000615216 CLASP2O75122 1294 aaKnown RBP4.78□□□□□ -1.64
CHD9-221ENST00000615216 OCM2P0CE71 109 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 OCMP0CE72 109 aaPredicted RBP4.78□□□□□ -1.64
CHD9-221ENST00000615216 UCHL3P15374 230 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 HLA-DPA1P20036 260 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 ATG9AQ7Z3C6 839 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 LDHDQ86WU2 507 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 SEPT8Q92599 483 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 NSUN4Q96CB9 384 aaKnown RBP4.78□□□□□ -1.64
CHD9-221ENST00000615216 SERPINB12Q96P63 405 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 LRRC1Q9BTT6 524 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 CCDC90BQ9GZT6 254 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 CYP4F11Q9HBI6 524 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 MLXIPLQ9NP71 852 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 VWDEQ8N2E2 1590 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 TMEM253P0C7T8 217 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 GYS2P54840 703 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 VSNL1P62760 191 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 STRIP1Q5VSL9 837 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 UGT3A1Q6NUS8 523 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 ARMC2Q8NEN0 867 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 DTX3LQ8TDB6 740 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 USP13Q92995 863 aaPredicted RBP4.78□□□□□ -1.64
CHD9-221ENST00000615216 GPR101Q96P66 508 aaPredicted RBP4.78□□□□□ -1.64
CHD9-221ENST00000615216 IFT172Q9UG01 1749 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 ALDH1A1P00352 501 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 PNPLA4P41247 253 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 RGS4P49798 205 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 MRPS25P82663 173 aaKnown RBP4.78□□□□□ -1.64
CHD9-221ENST00000615216 BRINP3Q76B58 766 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 RNF135Q8IUD6 432 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 IGDCC4Q8TDY8 1250 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 SCFD2Q8WU76 684 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 ANKRD7Q92527 254 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 HPS3Q969F9 1004 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 RBBP8Q99708 897 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 OSBPL8Q9BZF1 889 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 RIC8BQ9NVN3 520 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 ERCC6L2Q5T890 1561 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 SUPT3HB4E1H0 165 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 STAT5BP51692 787 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 GEMIN4P57678 1058 aaKnown RBP4.78□□□□□ -1.64
CHD9-221ENST00000615216 KLC1Q07866 573 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 RRM2BQ7LG56 351 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 COL23A1Q86Y22 540 aaPredicted RBP4.78□□□□□ -1.64
CHD9-221ENST00000615216 HNRNPLLQ8WVV9 542 aaKnown RBP4.78□□□□□ -1.64
CHD9-221ENST00000615216 FAM162AQ96A26 154 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 SEC16BQ96JE7 1060 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 AURKCQ9UQB9 309 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 NPHP3-ACAD11A0A0J9YXS1 232 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 BNIP3LO60238 219 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 GSNP06396 782 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 SNRPAP09012 282 aaKnown RBP4.78□□□□□ -1.64
CHD9-221ENST00000615216 PYGMP11217 842 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 DMC1Q14565 340 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 MEI1Q5TIA1 1274 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 HHIPL2Q6UWX4 724 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 CATSPER3Q86XQ3 398 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 UNC45AQ9H3U1 944 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 ZNF229Q9UJW7 825 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 ZDHHC9Q9Y397 364 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 PCDHB2Q9Y5E7 798 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 NDUFS3O75489 264 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 APRTP07741 180 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 HIST1H2AGP0C0S8 130 aaPredicted RBP4.78□□□□□ -1.64
CHD9-221ENST00000615216 HIST1H2ADP20671 130 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 LSP1P33241 339 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 TRPC1P48995 793 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 DEFA1P59665 94 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms