RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 PLAGL2Q9UPG8 496 aa5.4□□□□□ -1.55
SYCP1-209ENST00000613524 KCNMB2Q9Y691 235 aa5.4□□□□□ -1.55
SYCP1-209ENST00000613524 TBX3O15119 743 aa5.4□□□□□ -1.55
SYCP1-209ENST00000613524 DKC1O60832 514 aaKnown RBP eCLIP5.4□□□□□ -1.55
SYCP1-209ENST00000613524 PHACTR2O75167 634 aa5.4□□□□□ -1.55
SYCP1-209ENST00000613524 HOXD8P13378 290 aaPredicted RBP5.4□□□□□ -1.55
SYCP1-209ENST00000613524 TRAPPC10P48553 1259 aa5.4□□□□□ -1.55
SYCP1-209ENST00000613524 LIG4P49917 911 aa5.4□□□□□ -1.55
SYCP1-209ENST00000613524 CYP2J2P51589 502 aa5.4□□□□□ -1.55
SYCP1-209ENST00000613524 NDUFA8P51970 172 aa5.4□□□□□ -1.55
SYCP1-209ENST00000613524 STRN3Q13033 797 aa5.4□□□□□ -1.55
SYCP1-209ENST00000613524 GPM6BQ13491 265 aa5.4□□□□□ -1.55
SYCP1-209ENST00000613524 COL9A2Q14055 689 aaPredicted RBP5.4□□□□□ -1.55
SYCP1-209ENST00000613524 DDR2Q16832 855 aa5.4□□□□□ -1.55
SYCP1-209ENST00000613524 KIAA1841Q6NSI8 718 aa5.4□□□□□ -1.55
SYCP1-209ENST00000613524 C12orf76Q8N812 135 aaPredicted RBP5.4□□□□□ -1.55
SYCP1-209ENST00000613524 KLHL23Q8NBE8 558 aa5.4□□□□□ -1.55
SYCP1-209ENST00000613524 FEZF2Q8TBJ5 459 aa5.4□□□□□ -1.55
SYCP1-209ENST00000613524 LEO1Q8WVC0 666 aaPredicted RBP5.4□□□□□ -1.55
SYCP1-209ENST00000613524 HERVK_113Q902F9 699 aa5.4□□□□□ -1.55
SYCP1-209ENST00000613524 CCDC127Q96BQ5 260 aa5.4□□□□□ -1.55
SYCP1-209ENST00000613524 MYO19Q96H55 970 aa5.4□□□□□ -1.55
SYCP1-209ENST00000613524 ADAMTS10Q9H324 1103 aa5.4□□□□□ -1.55
SYCP1-209ENST00000613524 FAM105AQ9NUU6 356 aa5.4□□□□□ -1.55
SYCP1-209ENST00000613524 MYMKA6NI61 221 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 B4GALT3O60512 393 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 KRT19P08727 400 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 TNFSF9P41273 254 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 KCNQ1P51787 676 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 CASP5P51878 434 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 FOXD4Q12950 439 aaPredicted RBP5.39□□□□□ -1.55
SYCP1-209ENST00000613524 CUL4BQ13620 913 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 TFDP1Q14186 410 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 SLC39A14Q15043 492 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 PTPAQ15257 358 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 TARBP2Q15633 366 aaKnown RBP5.39□□□□□ -1.55
SYCP1-209ENST00000613524 EPC2Q52LR7 807 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 MOXD1Q6UVY6 613 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 GLB1LQ6UWU2 654 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 SV2BQ7L1I2 683 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 C11orf96Q7Z7L8 435 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 PALB2Q86YC2 1186 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 CEP57L1Q8IYX8 460 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 IGSF22Q8N9C0 903 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 ITPKCQ96DU7 683 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 MBOAT7Q96N66 472 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 RAD9AQ99638 391 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 ZSCAN16Q9H4T2 348 aaPredicted RBP5.39□□□□□ -1.55
SYCP1-209ENST00000613524 DHX33Q9H6R0 707 aaKnown RBP5.39□□□□□ -1.55
SYCP1-209ENST00000613524 ZFAND3Q9H8U3 227 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 MTMR10Q9NXD2 777 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 ZIM2Q9NZV7 527 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 INSL6Q9Y581 213 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 ATP6V1DQ9Y5K8 247 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 EP300Q09472 2414 aaPredicted RBP5.39□□□□□ -1.55
SYCP1-209ENST00000613524 SPEGQ15772 3267 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 ABHD14A-ACY1A0A1B0GW23 586 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 GOLGA8CPA6NN73 597 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 PES1O00541 588 aaKnown RBP5.39□□□□□ -1.55
SYCP1-209ENST00000613524 HRO43593 1189 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 RECQL4O94761 1208 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 CXCL8P10145 99 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 DLATP10515 647 aaKnown RBP5.39□□□□□ -1.55
SYCP1-209ENST00000613524 ITGA4P13612 1032 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 PFKFB1P16118 471 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 CYP11B2P19099 503 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 ALDH7A1P49419 539 aaKnown RBP5.39□□□□□ -1.55
SYCP1-209ENST00000613524 MGAT3Q09327 533 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 PNOCQ13519 176 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 ARSHQ5FYA8 562 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 ADALQ6DHV7 355 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 SLC24A5Q71RS6 500 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 CNNM3Q8NE01 707 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 FBF1Q8TES7 1133 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 COG1Q8WTW3 980 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 TCP11Q8WWU5 503 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 TOP1MTQ969P6 601 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 C18orf25Q96B23 403 aaPredicted RBP5.39□□□□□ -1.55
SYCP1-209ENST00000613524 ADPGKQ9BRR6 497 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 BLOC1S4Q9NUP1 217 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 KCNH3Q9ULD8 1083 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 IPPQ9Y573 584 aa5.39□□□□□ -1.55
SYCP1-209ENST00000613524 TSPAN1O60635 241 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 EYA4O95677 639 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 SYKP43405 635 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 NRIP1P48552 1158 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 STX17P56962 302 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 CENPCQ03188 943 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 PTPN11Q06124 597 aaPredicted RBP5.38□□□□□ -1.55
SYCP1-209ENST00000613524 CLLU1OSQ5K130 101 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 DNTTIP2Q5QJE6 756 aaKnown RBP5.38□□□□□ -1.55
SYCP1-209ENST00000613524 ATF7IP2Q5U623 682 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 B3GNT9Q6UX72 402 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 ADAMTSL4Q6UY14 1074 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 HAUS6Q7Z4H7 955 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 DAW1Q8N136 415 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 STKLD1Q8NE28 680 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 MCPH1Q8NEM0 835 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 POF1BQ8WVV4 589 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 POMGNT1Q8WZA1 660 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms