RNA–Protein interactions for RNA: ENST00000602319.1

HCG18-242, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 3,342 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-242ENST00000602319 CAPN9O14815 690 aa10.48□□□□□ -0.73
HCG18-242ENST00000602319 FOSP01100 380 aaPredicted RBP10.48□□□□□ -0.73
HCG18-242ENST00000602319 UNGP13051 313 aaPredicted RBP10.48□□□□□ -0.73
HCG18-242ENST00000602319 CDK16Q00536 496 aa10.48□□□□□ -0.73
HCG18-242ENST00000602319 CBLBQ13191 982 aa10.48□□□□□ -0.73
HCG18-242ENST00000602319 PRR16Q569H4 304 aa10.48□□□□□ -0.73
HCG18-242ENST00000602319 NBPF5PQ86XG9 351 aaPredicted RBP10.48□□□□□ -0.73
HCG18-242ENST00000602319 KATNAL2Q8IYT4 538 aa10.48□□□□□ -0.73
HCG18-242ENST00000602319 MYCT1Q8N699 235 aa10.48□□□□□ -0.73
HCG18-242ENST00000602319 SMC1BQ8NDV3 1235 aa10.48□□□□□ -0.73
HCG18-242ENST00000602319 WDR60Q8WVS4 1066 aa10.48□□□□□ -0.73
HCG18-242ENST00000602319 SMC6Q96SB8 1091 aa10.48□□□□□ -0.73
HCG18-242ENST00000602319 RBM15Q96T37 977 aaKnown RBP eCLIP10.48□□□□□ -0.73
HCG18-242ENST00000602319 MAK16Q9BXY0 300 aaKnown RBP10.48□□□□□ -0.73
HCG18-242ENST00000602319 VPS11Q9H270 941 aa10.48□□□□□ -0.73
HCG18-242ENST00000602319 COMMD3-BMI1R4GMX3 469 aa10.48□□□□□ -0.73
HCG18-242ENST00000602319 SIP14410 1827 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 ALOX15BO15296 676 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 PSMD10O75832 226 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 ADCY8P40145 1251 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 CDK7P50613 346 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 CYP2J2P51589 502 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 VAMP7P51809 220 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 SNRPFP62306 86 aaKnown RBP10.47□□□□□ -0.73
HCG18-242ENST00000602319 CDK18Q07002 472 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 FYB2Q5VWT5 728 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 PCNX4Q63HM2 1172 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 SLC47A2Q86VL8 602 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 KIAA0825Q8IV33 1275 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 GPAMQ9HCL2 828 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 LARSQ9P2J5 1176 aaKnown RBP10.47□□□□□ -0.73
HCG18-242ENST00000602319 PSMC3IPQ9P2W1 217 aaPredicted RBP10.47□□□□□ -0.73
HCG18-242ENST00000602319 CHORDC1Q9UHD1 332 aaPredicted RBP10.47□□□□□ -0.73
HCG18-242ENST00000602319 SCN4AP35499 1836 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 CAPN14A8MX76 684 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 MAP3K7O43318 606 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 HAUS5O94927 633 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 MYBL1P10243 752 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 CYP11B1P15538 503 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 GSTT1P30711 240 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 ENPEPQ07075 957 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 ALCAMQ13740 583 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 OTOP1Q7RTM1 612 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 NET1Q7Z628 596 aaPredicted RBP10.47□□□□□ -0.73
HCG18-242ENST00000602319 LINC00116Q8NCU8 138 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 HELQQ8TDG4 1101 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 SLC5A5Q92911 643 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 FAM81BQ96LP2 452 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 C9orf72Q96LT7 481 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 CDCA7Q9BWT1 371 aaPredicted RBP10.47□□□□□ -0.73
HCG18-242ENST00000602319 UBE2OQ9C0C9 1292 aaKnown RBP10.47□□□□□ -0.73
HCG18-242ENST00000602319 ASCC2Q9H1I8 757 aaPredicted RBP10.47□□□□□ -0.73
HCG18-242ENST00000602319 DNAJC17Q9NVM6 304 aaKnown RBP10.47□□□□□ -0.73
HCG18-242ENST00000602319 ATXN10Q9UBB4 475 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 TMCO1Q9UM00 188 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 LY75O60449 1722 aa10.47□□□□□ -0.73
HCG18-242ENST00000602319 HGSO14964 777 aaPredicted RBP10.46□□□□□ -0.73
HCG18-242ENST00000602319 BUD23O43709 281 aaKnown RBP10.46□□□□□ -0.73
HCG18-242ENST00000602319 TOM1O60784 492 aa10.46□□□□□ -0.73
HCG18-242ENST00000602319 PTPN7P35236 360 aa10.46□□□□□ -0.73
HCG18-242ENST00000602319 KSR1Q8IVT5 923 aa10.46□□□□□ -0.73
HCG18-242ENST00000602319 DHX37Q8IY37 1157 aaKnown RBP10.46□□□□□ -0.73
HCG18-242ENST00000602319 DAW1Q8N136 415 aa10.46□□□□□ -0.73
HCG18-242ENST00000602319 KAT5Q92993 513 aa10.46□□□□□ -0.73
HCG18-242ENST00000602319 TAS2R1Q9NYW7 299 aa10.46□□□□□ -0.73
HCG18-242ENST00000602319 LMCD1Q9NZU5 365 aa10.46□□□□□ -0.73
HCG18-242ENST00000602319 MTO1Q9Y2Z2 717 aaKnown RBP10.46□□□□□ -0.73
HCG18-242ENST00000602319 A0A1W2PRG0 241 aa10.46□□□□□ -0.73
HCG18-242ENST00000602319 NDC80O14777 642 aa10.46□□□□□ -0.73
HCG18-242ENST00000602319 CSDE1O75534 798 aaKnown RBP10.46□□□□□ -0.73
HCG18-242ENST00000602319 DLDP09622 509 aaKnown RBP10.46□□□□□ -0.73
HCG18-242ENST00000602319 TROVE2P10155 538 aaKnown RBP eCLIP10.46□□□□□ -0.73
HCG18-242ENST00000602319 SLC16A2P36021 539 aa10.46□□□□□ -0.73
HCG18-242ENST00000602319 GPC3P51654 580 aa10.46□□□□□ -0.73
HCG18-242ENST00000602319 SH3BGRP55822 239 aaPredicted RBP10.46□□□□□ -0.73
HCG18-242ENST00000602319 MORF4L2Q15014 288 aa10.46□□□□□ -0.73
HCG18-242ENST00000602319 PRKD1Q15139 912 aaPredicted RBP10.46□□□□□ -0.73
HCG18-242ENST00000602319 CERKLQ49MI3 558 aaPredicted RBP10.46□□□□□ -0.73
HCG18-242ENST00000602319 LVRNQ6Q4G3 990 aa10.46□□□□□ -0.73
HCG18-242ENST00000602319 ADGRD1Q6QNK2 874 aa10.46□□□□□ -0.73
HCG18-242ENST00000602319 CLEC10AQ8IUN9 316 aa10.46□□□□□ -0.73
HCG18-242ENST00000602319 SLF2Q8IX21 1173 aa10.46□□□□□ -0.73
HCG18-242ENST00000602319 RBM12BQ8IXT5 1001 aaKnown RBP10.46□□□□□ -0.73
HCG18-242ENST00000602319 BANPQ8N9N5 519 aa10.46□□□□□ -0.73
HCG18-242ENST00000602319 OSBPL8Q9BZF1 889 aa10.46□□□□□ -0.73
HCG18-242ENST00000602319 TMEM117Q9H0C3 514 aa10.46□□□□□ -0.73
HCG18-242ENST00000602319 ST6GALNAC4Q9H4F1 302 aa10.46□□□□□ -0.73
HCG18-242ENST00000602319 NPHS2Q9NP85 383 aa10.46□□□□□ -0.73
HCG18-242ENST00000602319 ANGPTL2Q9UKU9 493 aa10.46□□□□□ -0.73
HCG18-242ENST00000602319 PCDHA1Q9Y5I3 950 aa10.46□□□□□ -0.73
HCG18-242ENST00000602319 SFI1A8K8P3 1242 aa10.46□□□□□ -0.74
HCG18-242ENST00000602319 KLF11O14901 512 aa10.46□□□□□ -0.74
HCG18-242ENST00000602319 PABPC4LP0CB38 370 aaKnown RBP10.46□□□□□ -0.74
HCG18-242ENST00000602319 GRAPQ13588 217 aa10.46□□□□□ -0.74
HCG18-242ENST00000602319 RNASEH2BQ5TBB1 312 aaKnown RBP10.46□□□□□ -0.74
HCG18-242ENST00000602319 SH2D5Q6ZV89 423 aa10.46□□□□□ -0.74
HCG18-242ENST00000602319 ZC3H18Q86VM9 953 aaKnown RBP10.46□□□□□ -0.74
HCG18-242ENST00000602319 CCNJLQ8IV13 435 aa10.46□□□□□ -0.74
HCG18-242ENST00000602319 GRAPLQ8TC17 118 aaPredicted RBP10.46□□□□□ -0.74
HCG18-242ENST00000602319 CNTN3Q9P232 1028 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms