RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 ATAT1Q5SQI0 421 aa18.66■□□□□ 0.58
SHKBP1-212ENST00000596163 LILRA6Q6PI73 481 aa18.66■□□□□ 0.58
SHKBP1-212ENST00000596163 CYP26C1Q6V0L0 522 aa18.66■□□□□ 0.58
SHKBP1-212ENST00000596163 CSGALNACT2Q8N6G5 542 aa18.66■□□□□ 0.58
SHKBP1-212ENST00000596163 KREMEN2Q8NCW0 462 aa18.66■□□□□ 0.58
SHKBP1-212ENST00000596163 MFSD14AQ96MC6 490 aa18.66■□□□□ 0.58
SHKBP1-212ENST00000596163 NECTIN4Q96NY8 510 aa18.66■□□□□ 0.58
SHKBP1-212ENST00000596163 POP1Q99575 1024 aaKnown RBP18.66■□□□□ 0.58
SHKBP1-212ENST00000596163 MAN1C1Q9NR34 630 aa18.66■□□□□ 0.58
SHKBP1-212ENST00000596163 TSHZ2Q9NRE2 1034 aa18.66■□□□□ 0.58
SHKBP1-212ENST00000596163 DMAC2Q9NW81 257 aa18.66■□□□□ 0.58
SHKBP1-212ENST00000596163 MAPK8IP1Q9UQF2 711 aa18.66■□□□□ 0.58
SHKBP1-212ENST00000596163 USP15Q9Y4E8 981 aaPredicted RBP18.66■□□□□ 0.58
SHKBP1-212ENST00000596163 CDY1Q9Y6F8 540 aa18.66■□□□□ 0.58
SHKBP1-212ENST00000596163 ATG2AQ2TAZ0 1938 aa18.65■□□□□ 0.58
SHKBP1-212ENST00000596163 OAZ2O95190 189 aa18.65■□□□□ 0.58
SHKBP1-212ENST00000596163 ITGB3P05106 788 aa18.65■□□□□ 0.58
SHKBP1-212ENST00000596163 DLATP10515 647 aaKnown RBP18.65■□□□□ 0.58
SHKBP1-212ENST00000596163 PPP1R2P41236 205 aa18.65■□□□□ 0.58
SHKBP1-212ENST00000596163 AP3M2P53677 418 aa18.65■□□□□ 0.58
SHKBP1-212ENST00000596163 STIM1Q13586 685 aa18.65■□□□□ 0.58
SHKBP1-212ENST00000596163 NFIL3Q16649 462 aa18.65■□□□□ 0.58
SHKBP1-212ENST00000596163 COBLL1Q53SF7 1204 aa18.65■□□□□ 0.58
SHKBP1-212ENST00000596163 RARS2Q5T160 578 aaKnown RBP18.65■□□□□ 0.58
SHKBP1-212ENST00000596163 LIN9Q5TKA1 542 aa18.65■□□□□ 0.58
SHKBP1-212ENST00000596163 RTL10Q7L3V2 364 aa18.65■□□□□ 0.58
SHKBP1-212ENST00000596163 METTL23Q86XA0 190 aa18.65■□□□□ 0.58
SHKBP1-212ENST00000596163 LRRC52Q8N7C0 313 aa18.65■□□□□ 0.58
SHKBP1-212ENST00000596163 C1orf127Q8N9H9 656 aa18.65■□□□□ 0.58
SHKBP1-212ENST00000596163 CMASQ8NFW8 434 aaPredicted RBP18.65■□□□□ 0.58
SHKBP1-212ENST00000596163 SENP8Q96LD8 212 aa18.65■□□□□ 0.58
SHKBP1-212ENST00000596163 AGAP1Q9UPQ3 857 aa18.65■□□□□ 0.58
SHKBP1-212ENST00000596163 EYSQ5T1H1 3165 aa18.65■□□□□ 0.58
SHKBP1-212ENST00000596163 KPNA7A9QM74 516 aa18.64■□□□□ 0.57
SHKBP1-212ENST00000596163 PPEF2O14830 753 aa18.64■□□□□ 0.57
SHKBP1-212ENST00000596163 KRT19P08727 400 aa18.64■□□□□ 0.57
SHKBP1-212ENST00000596163 POLR2BP30876 1174 aaKnown RBP18.64■□□□□ 0.57
SHKBP1-212ENST00000596163 WNT7BP56706 349 aa18.64■□□□□ 0.57
SHKBP1-212ENST00000596163 MYO1EQ12965 1108 aa18.64■□□□□ 0.57
SHKBP1-212ENST00000596163 CBX2Q14781 532 aaPredicted RBP18.64■□□□□ 0.57
SHKBP1-212ENST00000596163 UVSSAQ2YD98 709 aa18.64■□□□□ 0.57
SHKBP1-212ENST00000596163 SLC8B1Q6J4K2 584 aa18.64■□□□□ 0.57
SHKBP1-212ENST00000596163 C15orf39Q6ZRI6 1047 aa18.64■□□□□ 0.57
SHKBP1-212ENST00000596163 C12orf76Q8N812 135 aaPredicted RBP18.64■□□□□ 0.57
SHKBP1-212ENST00000596163 SUSD6Q92537 303 aa18.64■□□□□ 0.57
SHKBP1-212ENST00000596163 CCDC127Q96BQ5 260 aa18.64■□□□□ 0.57
SHKBP1-212ENST00000596163 CGRRF1Q99675 332 aa18.64■□□□□ 0.57
SHKBP1-212ENST00000596163 TSG101Q99816 390 aa18.64■□□□□ 0.57
SHKBP1-212ENST00000596163 APOL5Q9BWW9 433 aa18.64■□□□□ 0.57
SHKBP1-212ENST00000596163 COL25A1Q9BXS0 654 aaPredicted RBP18.64■□□□□ 0.57
SHKBP1-212ENST00000596163 MTMR12Q9C0I1 747 aa18.64■□□□□ 0.57
SHKBP1-212ENST00000596163 ZDHHC7Q9NXF8 308 aa18.64■□□□□ 0.57
SHKBP1-212ENST00000596163 FBXL5Q9UKA1 691 aa18.64■□□□□ 0.57
SHKBP1-212ENST00000596163 MAFFQ9ULX9 164 aa18.64■□□□□ 0.57
SHKBP1-212ENST00000596163 PRUNE2Q8WUY3 3088 aa18.64■□□□□ 0.57
SHKBP1-212ENST00000596163 TRIP11Q15643 1979 aa18.64■□□□□ 0.57
SHKBP1-212ENST00000596163 OR6C75A6NL08 312 aa18.63■□□□□ 0.57
SHKBP1-212ENST00000596163 GOLGA6L22H0YM25 854 aa18.63■□□□□ 0.57
SHKBP1-212ENST00000596163 CYB561D2O14569 222 aa18.63■□□□□ 0.57
SHKBP1-212ENST00000596163 MAPK13O15264 365 aa18.63■□□□□ 0.57
SHKBP1-212ENST00000596163 TBC1D4O60343 1298 aa18.63■□□□□ 0.57
SHKBP1-212ENST00000596163 SPATA31D3P0C874 917 aa18.63■□□□□ 0.57
SHKBP1-212ENST00000596163 NR2F2P24468 414 aa18.63■□□□□ 0.57
SHKBP1-212ENST00000596163 ELF1P32519 619 aa18.63■□□□□ 0.57
SHKBP1-212ENST00000596163 EDRF1Q3B7T1 1238 aa18.63■□□□□ 0.57
SHKBP1-212ENST00000596163 CEP135Q66GS9 1140 aa18.63■□□□□ 0.57
SHKBP1-212ENST00000596163 OVOS1Q6IE37 1185 aa18.63■□□□□ 0.57
SHKBP1-212ENST00000596163 SPATA31D4Q6ZUB0 917 aa18.63■□□□□ 0.57
SHKBP1-212ENST00000596163 CCDC149Q6ZUS6 474 aa18.63■□□□□ 0.57
SHKBP1-212ENST00000596163 GPR149Q86SP6 731 aa18.63■□□□□ 0.57
SHKBP1-212ENST00000596163 ADHFE1Q8IWW8 467 aa18.63■□□□□ 0.57
SHKBP1-212ENST00000596163 THEM5Q8N1Q8 247 aa18.63■□□□□ 0.57
SHKBP1-212ENST00000596163 TMEM130Q8N3G9 435 aa18.63■□□□□ 0.57
SHKBP1-212ENST00000596163 ZNF461Q8TAF7 563 aa18.63■□□□□ 0.57
SHKBP1-212ENST00000596163 PHF7Q9BWX1 381 aaPredicted RBP18.63■□□□□ 0.57
SHKBP1-212ENST00000596163 RHOBTB2Q9BYZ6 727 aa18.63■□□□□ 0.57
SHKBP1-212ENST00000596163 FBXW11Q9UKB1 542 aa18.63■□□□□ 0.57
SHKBP1-212ENST00000596163 BRWD1Q9NSI6 2320 aa18.63■□□□□ 0.57
SHKBP1-212ENST00000596163 UNC80Q8N2C7 3258 aa18.63■□□□□ 0.57
SHKBP1-212ENST00000596163 CCDC195A0A1B0GUA6 201 aa18.62■□□□□ 0.57
SHKBP1-212ENST00000596163 SPTLC1O15269 473 aa18.62■□□□□ 0.57
SHKBP1-212ENST00000596163 HUS1O60921 280 aa18.62■□□□□ 0.57
SHKBP1-212ENST00000596163 ZMYND10O75800 440 aa18.62■□□□□ 0.57
SHKBP1-212ENST00000596163 CYP11A1P05108 521 aa18.62■□□□□ 0.57
SHKBP1-212ENST00000596163 PRCPP42785 496 aa18.62■□□□□ 0.57
SHKBP1-212ENST00000596163 ARPP19P56211 112 aa18.62■□□□□ 0.57
SHKBP1-212ENST00000596163 ADAM9Q13443 819 aa18.62■□□□□ 0.57
SHKBP1-212ENST00000596163 TPGS2Q68CL5 300 aa18.62■□□□□ 0.57
SHKBP1-212ENST00000596163 LMBRD2Q68DH5 695 aaPredicted RBP18.62■□□□□ 0.57
SHKBP1-212ENST00000596163 RSPO2Q6UXX9 243 aaPredicted RBP18.62■□□□□ 0.57
SHKBP1-212ENST00000596163 TMC5Q6UXY8 1006 aa18.62■□□□□ 0.57
SHKBP1-212ENST00000596163 TRAPPC11Q7Z392 1133 aa18.62■□□□□ 0.57
SHKBP1-212ENST00000596163 SMYD4Q8IYR2 804 aaPredicted RBP18.62■□□□□ 0.57
SHKBP1-212ENST00000596163 OR5B17Q8NGF7 314 aa18.62■□□□□ 0.57
SHKBP1-212ENST00000596163 ERCC4Q92889 916 aaPredicted RBP18.62■□□□□ 0.57
SHKBP1-212ENST00000596163 TIMM13Q9Y5L4 95 aaPredicted RBP18.62■□□□□ 0.57
SHKBP1-212ENST00000596163 PSMA7O14818 248 aa18.61■□□□□ 0.57
SHKBP1-212ENST00000596163 CETN3O15182 167 aa18.61■□□□□ 0.57
SHKBP1-212ENST00000596163 ADAM12O43184 909 aa18.61■□□□□ 0.57
SHKBP1-212ENST00000596163 PHACTR2O75167 634 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 197.8 ms