RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 MCM4P33991 863 aa19.1■□□□□ 0.65
SHKBP1-203ENST00000594298 DDIT3P35638 169 aa19.1■□□□□ 0.65
SHKBP1-203ENST00000594298 CCR2P41597 374 aa19.1■□□□□ 0.65
SHKBP1-203ENST00000594298 SMTNP53814 917 aa19.1■□□□□ 0.65
SHKBP1-203ENST00000594298 SLC12A3P55017 1021 aa19.1■□□□□ 0.65
SHKBP1-203ENST00000594298 MCL1Q07820 350 aa19.1■□□□□ 0.65
SHKBP1-203ENST00000594298 ADCY1Q08828 1119 aa19.1■□□□□ 0.65
SHKBP1-203ENST00000594298 FZD5Q13467 585 aa19.1■□□□□ 0.65
SHKBP1-203ENST00000594298 KARSQ15046 597 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-203ENST00000594298 FOXD4L6Q3SYB3 417 aaPredicted RBP19.1■□□□□ 0.65
SHKBP1-203ENST00000594298 FAM78AQ5JUQ0 283 aa19.1■□□□□ 0.65
SHKBP1-203ENST00000594298 CYP4A22Q5TCH4 519 aa19.1■□□□□ 0.65
SHKBP1-203ENST00000594298 FOXD4L3Q6VB84 417 aaPredicted RBP19.1■□□□□ 0.65
SHKBP1-203ENST00000594298 LEMD2Q8NC56 503 aa19.1■□□□□ 0.65
SHKBP1-203ENST00000594298 ZBTB44Q8NCP5 570 aa19.1■□□□□ 0.65
SHKBP1-203ENST00000594298 KCNN1Q92952 543 aa19.1■□□□□ 0.65
SHKBP1-203ENST00000594298 TCEAL4Q96EI5 215 aa19.1■□□□□ 0.65
SHKBP1-203ENST00000594298 EPSTI1Q96J88 318 aa19.1■□□□□ 0.65
SHKBP1-203ENST00000594298 ASB16Q96NS5 453 aa19.1■□□□□ 0.65
SHKBP1-203ENST00000594298 CLIC6Q96NY7 704 aa19.1■□□□□ 0.65
SHKBP1-203ENST00000594298 HINFPQ9BQA5 517 aa19.1■□□□□ 0.65
SHKBP1-203ENST00000594298 TRPV5Q9NQA5 729 aa19.1■□□□□ 0.65
SHKBP1-203ENST00000594298 HEBP1Q9NRV9 189 aa19.1■□□□□ 0.65
SHKBP1-203ENST00000594298 ANKFY1Q9P2R3 1169 aa19.1■□□□□ 0.65
SHKBP1-203ENST00000594298 PCDHB8Q9UN66 801 aa19.1■□□□□ 0.65
SHKBP1-203ENST00000594298 SPTBN4Q9H254 2564 aa19.09■□□□□ 0.65
SHKBP1-203ENST00000594298 HARSP12081 509 aaKnown RBP19.09■□□□□ 0.65
SHKBP1-203ENST00000594298 EPHA5P54756 1037 aa19.09■□□□□ 0.65
SHKBP1-203ENST00000594298 CSTF1Q05048 431 aaKnown RBP19.09■□□□□ 0.65
SHKBP1-203ENST00000594298 PKP1Q13835 747 aa19.09■□□□□ 0.65
SHKBP1-203ENST00000594298 RRAGBQ5VZM2 374 aa19.09■□□□□ 0.65
SHKBP1-203ENST00000594298 IQCEQ6IPM2 695 aa19.09■□□□□ 0.65
SHKBP1-203ENST00000594298 CCDC73Q6ZRK6 1079 aa19.09■□□□□ 0.65
SHKBP1-203ENST00000594298 ZNF687Q8N1G0 1237 aa19.09■□□□□ 0.65
SHKBP1-203ENST00000594298 ELMOD1Q8N336 334 aa19.09■□□□□ 0.65
SHKBP1-203ENST00000594298 BEST2Q8NFU1 509 aa19.09■□□□□ 0.65
SHKBP1-203ENST00000594298 LARP4BQ92615 738 aaKnown RBP19.09■□□□□ 0.65
SHKBP1-203ENST00000594298 RAD54LQ92698 747 aa19.09■□□□□ 0.65
SHKBP1-203ENST00000594298 OXCT2Q9BYC2 517 aaPredicted RBP19.09■□□□□ 0.65
SHKBP1-203ENST00000594298 PRMT8Q9NR22 394 aaPredicted RBP19.09■□□□□ 0.65
SHKBP1-203ENST00000594298 ZSCAN32Q9NX65 697 aa19.09■□□□□ 0.65
SHKBP1-203ENST00000594298 STK17AQ9UEE5 414 aa19.09■□□□□ 0.65
SHKBP1-203ENST00000594298 TUBGCP4Q9UGJ1 667 aa19.09■□□□□ 0.65
SHKBP1-203ENST00000594298 M0QZQ0 153 aa19.08■□□□□ 0.64
SHKBP1-203ENST00000594298 MAN2B1O00754 1011 aa19.08■□□□□ 0.64
SHKBP1-203ENST00000594298 CLDN3O15551 220 aa19.08■□□□□ 0.64
SHKBP1-203ENST00000594298 CUTAO60888 179 aa19.08■□□□□ 0.64
SHKBP1-203ENST00000594298 LILRB5O75023 590 aa19.08■□□□□ 0.64
SHKBP1-203ENST00000594298 OAZ2O95190 189 aa19.08■□□□□ 0.64
SHKBP1-203ENST00000594298 LRPAP1P30533 357 aa19.08■□□□□ 0.64
SHKBP1-203ENST00000594298 TWF1Q12792 350 aa19.08■□□□□ 0.64
SHKBP1-203ENST00000594298 GPBP1Q86WP2 473 aa19.08■□□□□ 0.64
SHKBP1-203ENST00000594298 MAP4K3Q8IVH8 894 aa19.08■□□□□ 0.64
SHKBP1-203ENST00000594298 DCLK2Q8N568 766 aa19.08■□□□□ 0.64
SHKBP1-203ENST00000594298 ATRIPQ8WXE1 791 aa19.08■□□□□ 0.64
SHKBP1-203ENST00000594298 SMARCD2Q92925 531 aa19.08■□□□□ 0.64
SHKBP1-203ENST00000594298 IRF7Q92985 503 aa19.08■□□□□ 0.64
SHKBP1-203ENST00000594298 ZNF512Q96ME7 567 aaPredicted RBP19.08■□□□□ 0.64
SHKBP1-203ENST00000594298 TRMT61BQ9BVS5 477 aaKnown RBP19.08■□□□□ 0.64
SHKBP1-203ENST00000594298 TRPV4Q9HBA0 871 aa19.08■□□□□ 0.64
SHKBP1-203ENST00000594298 CEP72Q9P209 647 aa19.08■□□□□ 0.64
SHKBP1-203ENST00000594298 FANCMQ8IYD8 2048 aa19.08■□□□□ 0.64
SHKBP1-203ENST00000594298 H0YCG3 227 aa19.07■□□□□ 0.64
SHKBP1-203ENST00000594298 NRG2O14511 850 aaPredicted RBP19.07■□□□□ 0.64
SHKBP1-203ENST00000594298 MOSPD3O75425 235 aa19.07■□□□□ 0.64
SHKBP1-203ENST00000594298 KRT18P05783 430 aaKnown RBP19.07■□□□□ 0.64
SHKBP1-203ENST00000594298 CXCL8P10145 99 aa19.07■□□□□ 0.64
SHKBP1-203ENST00000594298 PSMC3P17980 439 aa19.07■□□□□ 0.64
SHKBP1-203ENST00000594298 AARSP49588 968 aaKnown RBP eCLIP19.07■□□□□ 0.64
SHKBP1-203ENST00000594298 YWHAHQ04917 246 aaPredicted RBP19.07■□□□□ 0.64
SHKBP1-203ENST00000594298 GRM2Q14416 872 aa19.07■□□□□ 0.64
SHKBP1-203ENST00000594298 DHX8Q14562 1220 aaKnown RBP19.07■□□□□ 0.64
SHKBP1-203ENST00000594298 PUM1Q14671 1186 aaKnown RBP eCLIP19.07■□□□□ 0.64
SHKBP1-203ENST00000594298 ZBTB6Q15916 424 aa19.07■□□□□ 0.64
SHKBP1-203ENST00000594298 SEZ6Q53EL9 994 aa19.07■□□□□ 0.64
SHKBP1-203ENST00000594298 MAMSTRQ6ZN01 415 aa19.07■□□□□ 0.64
SHKBP1-203ENST00000594298 USP49Q70CQ1 688 aa19.07■□□□□ 0.64
SHKBP1-203ENST00000594298 DEPDC1BQ8WUY9 529 aa19.07■□□□□ 0.64
SHKBP1-203ENST00000594298 ZSWIM3Q96MP5 696 aa19.07■□□□□ 0.64
SHKBP1-203ENST00000594298 IER2Q9BTL4 223 aa19.07■□□□□ 0.64
SHKBP1-203ENST00000594298 FAM126AQ9BYI3 521 aaPredicted RBP19.07■□□□□ 0.64
SHKBP1-203ENST00000594298 BRD9Q9H8M2 597 aa19.07■□□□□ 0.64
SHKBP1-203ENST00000594298 BLOC1S4Q9NUP1 217 aa19.07■□□□□ 0.64
SHKBP1-203ENST00000594298 DLL3Q9NYJ7 618 aa19.07■□□□□ 0.64
SHKBP1-203ENST00000594298 LARSQ9P2J5 1176 aaKnown RBP19.07■□□□□ 0.64
SHKBP1-203ENST00000594298 ODF2LQ9ULJ1 636 aa19.07■□□□□ 0.64
SHKBP1-203ENST00000594298 MIA3Q5JRA6 1907 aa19.07■□□□□ 0.64
SHKBP1-203ENST00000594298 TTC26A0AVF1 554 aa19.06■□□□□ 0.64
SHKBP1-203ENST00000594298 CLTAP09496 248 aa19.06■□□□□ 0.64
SHKBP1-203ENST00000594298 CPB1P15086 417 aa19.06■□□□□ 0.64
SHKBP1-203ENST00000594298 CYP3A5P20815 502 aa19.06■□□□□ 0.64
SHKBP1-203ENST00000594298 ME1P48163 572 aa19.06■□□□□ 0.64
SHKBP1-203ENST00000594298 KRT85P78386 507 aa19.06■□□□□ 0.64
SHKBP1-203ENST00000594298 NUCB2P80303 420 aa19.06■□□□□ 0.64
SHKBP1-203ENST00000594298 DNM1Q05193 864 aaKnown RBP19.06■□□□□ 0.64
SHKBP1-203ENST00000594298 RAD51AP2Q09MP3 1159 aa19.06■□□□□ 0.64
SHKBP1-203ENST00000594298 MCM6Q14566 821 aa19.06■□□□□ 0.64
SHKBP1-203ENST00000594298 KYAT1Q16773 422 aa19.06■□□□□ 0.64
SHKBP1-203ENST00000594298 VITQ6UXI7 678 aa19.06■□□□□ 0.64
SHKBP1-203ENST00000594298 RNF19BQ6ZMZ0 732 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms