RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 NT5DC4Q86YG4 428 aa21.76■■□□□ 1.07
SS18-218ENST00000581021 RDH13Q8NBN7 331 aa21.76■■□□□ 1.07
SS18-218ENST00000581021 CMASQ8NFW8 434 aaPredicted RBP21.76■■□□□ 1.07
SS18-218ENST00000581021 BORCS6Q96GS4 357 aa21.76■■□□□ 1.07
SS18-218ENST00000581021 SIX4Q9UIU6 781 aa21.76■■□□□ 1.07
SS18-218ENST00000581021 MAPK8IP1Q9UQF2 711 aa21.76■■□□□ 1.07
SS18-218ENST00000581021 WDR27A2RRH5 827 aa21.75■■□□□ 1.07
SS18-218ENST00000581021 ZNF233A6NK53 670 aa21.75■■□□□ 1.07
SS18-218ENST00000581021 POLR2BP30876 1174 aaKnown RBP21.75■■□□□ 1.07
SS18-218ENST00000581021 SSTR3P32745 418 aaPredicted RBP21.75■■□□□ 1.07
SS18-218ENST00000581021 SNRPFP62306 86 aaKnown RBP21.75■■□□□ 1.07
SS18-218ENST00000581021 KCNB1Q14721 858 aa21.75■■□□□ 1.07
SS18-218ENST00000581021 CES5AQ6NT32 575 aa21.75■■□□□ 1.07
SS18-218ENST00000581021 SMYD4Q8IYR2 804 aaPredicted RBP21.75■■□□□ 1.07
SS18-218ENST00000581021 XXYLT1Q8NBI6 393 aa21.75■■□□□ 1.07
SS18-218ENST00000581021 PLEKHO2Q8TD55 490 aa21.75■■□□□ 1.07
SS18-218ENST00000581021 HDAC7Q8WUI4 952 aa21.75■■□□□ 1.07
SS18-218ENST00000581021 RPGRIP1Q96KN7 1286 aa21.75■■□□□ 1.07
SS18-218ENST00000581021 SENP8Q96LD8 212 aa21.75■■□□□ 1.07
SS18-218ENST00000581021 PLEKHA4Q9H4M7 779 aa21.75■■□□□ 1.07
SS18-218ENST00000581021 DMAC2Q9NW81 257 aa21.75■■□□□ 1.07
SS18-218ENST00000581021 MTCL1Q9Y4B5 1905 aaKnown RBP21.74■■□□□ 1.07
SS18-218ENST00000581021 CCDC195A0A1B0GUA6 201 aa21.74■■□□□ 1.07
SS18-218ENST00000581021 OAZ2O95190 189 aa21.74■■□□□ 1.07
SS18-218ENST00000581021 ITGB3P05106 788 aa21.74■■□□□ 1.07
SS18-218ENST00000581021 CYP24A1Q07973 514 aa21.74■■□□□ 1.07
SS18-218ENST00000581021 CTXN3Q4LDR2 81 aa21.74■■□□□ 1.07
SS18-218ENST00000581021 DSTYKQ6XUX3 929 aa21.74■■□□□ 1.07
SS18-218ENST00000581021 APPL2Q8NEU8 664 aa21.74■■□□□ 1.07
SS18-218ENST00000581021 POP1Q99575 1024 aaKnown RBP21.74■■□□□ 1.07
SS18-218ENST00000581021 INTS13Q9NVM9 706 aa21.74■■□□□ 1.07
SS18-218ENST00000581021 SPDYE4A6NLX3 237 aa21.73■■□□□ 1.07
SS18-218ENST00000581021 ZMYND10O75800 440 aa21.73■■□□□ 1.07
SS18-218ENST00000581021 VNN2O95498 520 aa21.73■■□□□ 1.07
SS18-218ENST00000581021 MTHFRP42898 656 aa21.73■■□□□ 1.07
SS18-218ENST00000581021 ZNF280DQ6N043 979 aa21.73■■□□□ 1.07
SS18-218ENST00000581021 C15orf39Q6ZRI6 1047 aa21.73■■□□□ 1.07
SS18-218ENST00000581021 SPATA20Q8TB22 786 aa21.73■■□□□ 1.07
SS18-218ENST00000581021 RIPOR3Q96MK2 946 aa21.73■■□□□ 1.07
SS18-218ENST00000581021 TIGD1Q96MW7 591 aa21.73■■□□□ 1.07
SS18-218ENST00000581021 NECTIN4Q96NY8 510 aa21.73■■□□□ 1.07
SS18-218ENST00000581021 KIAA1586Q9HCI6 787 aa21.73■■□□□ 1.07
SS18-218ENST00000581021 CGNQ9P2M7 1197 aaKnown RBP21.73■■□□□ 1.07
SS18-218ENST00000581021 PDXKO00764 312 aa21.72■■□□□ 1.07
SS18-218ENST00000581021 ABLIM3O94929 683 aa21.72■■□□□ 1.07
SS18-218ENST00000581021 NR3C1P04150 777 aa21.72■■□□□ 1.07
SS18-218ENST00000581021 C8AP07357 584 aa21.72■■□□□ 1.07
SS18-218ENST00000581021 OR4Q2P0C623 313 aa21.72■■□□□ 1.07
SS18-218ENST00000581021 TYMPP19971 482 aa21.72■■□□□ 1.07
SS18-218ENST00000581021 CASP4P49662 377 aa21.72■■□□□ 1.07
SS18-218ENST00000581021 TAF6P49848 677 aa21.72■■□□□ 1.07
SS18-218ENST00000581021 ARPP19P56211 112 aa21.72■■□□□ 1.07
SS18-218ENST00000581021 YWHAHQ04917 246 aaPredicted RBP21.72■■□□□ 1.07
SS18-218ENST00000581021 PSMD6Q15008 389 aa21.72■■□□□ 1.07
SS18-218ENST00000581021 ATAT1Q5SQI0 421 aa21.72■■□□□ 1.07
SS18-218ENST00000581021 GOLGA5Q8TBA6 731 aa21.72■■□□□ 1.07
SS18-218ENST00000581021 SLC7A14Q8TBB6 771 aa21.72■■□□□ 1.07
SS18-218ENST00000581021 TMEM174Q8WUU8 243 aa21.72■■□□□ 1.07
SS18-218ENST00000581021 CCDC127Q96BQ5 260 aa21.72■■□□□ 1.07
SS18-218ENST00000581021 MFSD14AQ96MC6 490 aa21.72■■□□□ 1.07
SS18-218ENST00000581021 TMEM209Q96SK2 561 aa21.72■■□□□ 1.07
SS18-218ENST00000581021 RTP3Q9BQQ7 232 aa21.72■■□□□ 1.07
SS18-218ENST00000581021 ZDHHC7Q9NXF8 308 aa21.72■■□□□ 1.07
SS18-218ENST00000581021 AGAP1Q9UPQ3 857 aa21.72■■□□□ 1.07
SS18-218ENST00000581021 PCDHA5Q9Y5H7 936 aa21.72■■□□□ 1.07
SS18-218ENST00000581021 C2CD4DB7Z1M9 353 aa21.71■■□□□ 1.07
SS18-218ENST00000581021 H7C4K7 107 aa21.71■■□□□ 1.07
SS18-218ENST00000581021 EXOC3O60645 756 aa21.71■■□□□ 1.07
SS18-218ENST00000581021 SEC24AO95486 1093 aa21.71■■□□□ 1.07
SS18-218ENST00000581021 CYP11A1P05108 521 aa21.71■■□□□ 1.07
SS18-218ENST00000581021 DLATP10515 647 aaKnown RBP21.71■■□□□ 1.07
SS18-218ENST00000581021 ZCWPW2Q504Y3 356 aa21.71■■□□□ 1.07
SS18-218ENST00000581021 WDR49Q8IV35 697 aa21.71■■□□□ 1.07
SS18-218ENST00000581021 SLC9A9Q8IVB4 645 aa21.71■■□□□ 1.07
SS18-218ENST00000581021 GUF1Q8N442 669 aaKnown RBP21.71■■□□□ 1.07
SS18-218ENST00000581021 CSGALNACT2Q8N6G5 542 aa21.71■■□□□ 1.07
SS18-218ENST00000581021 OR10T2Q8NGX3 314 aa21.71■■□□□ 1.07
SS18-218ENST00000581021 SMG7Q92540 1137 aaKnown RBP21.71■■□□□ 1.07
SS18-218ENST00000581021 ZNF516Q92618 1163 aa21.71■■□□□ 1.07
SS18-218ENST00000581021 RHOBTB2Q9BYZ6 727 aa21.71■■□□□ 1.07
SS18-218ENST00000581021 PRKD2Q9BZL6 878 aa21.71■■□□□ 1.07
SS18-218ENST00000581021 TSHZ2Q9NRE2 1034 aa21.71■■□□□ 1.07
SS18-218ENST00000581021 DPP7Q9UHL4 492 aa21.71■■□□□ 1.07
SS18-218ENST00000581021 ITGA11Q9UKX5 1188 aa21.71■■□□□ 1.07
SS18-218ENST00000581021 TRIOO75962 3097 aa21.71■■□□□ 1.07
SS18-218ENST00000581021 CYB561D2O14569 222 aa21.7■■□□□ 1.06
SS18-218ENST00000581021 N4BP1O75113 896 aaKnown RBP21.7■■□□□ 1.06
SS18-218ENST00000581021 TMEM191BP0C7N4 346 aa21.7■■□□□ 1.06
SS18-218ENST00000581021 ODC1P11926 461 aa21.7■■□□□ 1.06
SS18-218ENST00000581021 LIN9Q5TKA1 542 aa21.7■■□□□ 1.06
SS18-218ENST00000581021 WSCD1Q658N2 575 aa21.7■■□□□ 1.06
SS18-218ENST00000581021 OVOS1Q6IE37 1185 aa21.7■■□□□ 1.06
SS18-218ENST00000581021 RNF135Q8IUD6 432 aa21.7■■□□□ 1.06
SS18-218ENST00000581021 ZNF461Q8TAF7 563 aa21.7■■□□□ 1.06
SS18-218ENST00000581021 CACTINQ8WUQ7 758 aaKnown RBP21.7■■□□□ 1.06
SS18-218ENST00000581021 CCDC47Q96A33 483 aaKnown RBP21.7■■□□□ 1.06
SS18-218ENST00000581021 CGRRF1Q99675 332 aa21.7■■□□□ 1.06
SS18-218ENST00000581021 EPHX3Q9H6B9 360 aa21.7■■□□□ 1.06
SS18-218ENST00000581021 TRAF3IP3Q9Y228 551 aa21.7■■□□□ 1.06
SS18-218ENST00000581021 DOCK6Q96HP0 2047 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 298.8 ms