RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 MCF2P10911 925 aa19.32■□□□□ 0.68
SMPD3-211ENST00000568373 CD58P19256 250 aa19.32■□□□□ 0.68
SMPD3-211ENST00000568373 SSTR3P32745 418 aaPredicted RBP19.32■□□□□ 0.68
SMPD3-211ENST00000568373 SLC1A1P43005 524 aa19.32■□□□□ 0.68
SMPD3-211ENST00000568373 DR1Q01658 176 aa19.32■□□□□ 0.68
SMPD3-211ENST00000568373 C1QBPQ07021 282 aaKnown RBP19.32■□□□□ 0.68
SMPD3-211ENST00000568373 ACVR2BQ13705 512 aa19.32■□□□□ 0.68
SMPD3-211ENST00000568373 DHX34Q14147 1143 aaKnown RBP19.32■□□□□ 0.68
SMPD3-211ENST00000568373 SMYD5Q6GMV2 418 aa19.32■□□□□ 0.68
SMPD3-211ENST00000568373 LLGL2Q6P1M3 1020 aa19.32■□□□□ 0.68
SMPD3-211ENST00000568373 PHLDB2Q86SQ0 1253 aa19.32■□□□□ 0.68
SMPD3-211ENST00000568373 PPP1R16BQ96T49 567 aa19.32■□□□□ 0.68
SMPD3-211ENST00000568373 SH3GL2Q99962 352 aa19.32■□□□□ 0.68
SMPD3-211ENST00000568373 RAB17Q9H0T7 212 aa19.32■□□□□ 0.68
SMPD3-211ENST00000568373 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.32■□□□□ 0.68
SMPD3-211ENST00000568373 DAPK3O43293 454 aa19.32■□□□□ 0.68
SMPD3-211ENST00000568373 ZEB2O60315 1214 aa19.32■□□□□ 0.68
SMPD3-211ENST00000568373 CYP2C19P33261 490 aa19.32■□□□□ 0.68
SMPD3-211ENST00000568373 ASPAP45381 313 aa19.32■□□□□ 0.68
SMPD3-211ENST00000568373 TNFAIP2Q03169 654 aa19.32■□□□□ 0.68
SMPD3-211ENST00000568373 PTP4A2Q12974 167 aa19.32■□□□□ 0.68
SMPD3-211ENST00000568373 PPFIA1Q13136 1202 aa19.32■□□□□ 0.68
SMPD3-211ENST00000568373 SLC13A5Q86YT5 568 aaPredicted RBP19.32■□□□□ 0.68
SMPD3-211ENST00000568373 PRELID2Q8N945 189 aa19.32■□□□□ 0.68
SMPD3-211ENST00000568373 PKNOX2Q96KN3 472 aa19.32■□□□□ 0.68
SMPD3-211ENST00000568373 PDZD7Q9H5P4 517 aa19.32■□□□□ 0.68
SMPD3-211ENST00000568373 MRPL47Q9HD33 250 aaKnown RBP19.32■□□□□ 0.68
SMPD3-211ENST00000568373 PSD3Q9NYI0 1048 aa19.32■□□□□ 0.68
SMPD3-211ENST00000568373 ZHX1Q9UKY1 873 aaPredicted RBP19.32■□□□□ 0.68
SMPD3-211ENST00000568373 KAT6AQ92794 2004 aa19.31■□□□□ 0.68
SMPD3-211ENST00000568373 FAM187AA6NFU0 413 aa19.31■□□□□ 0.68
SMPD3-211ENST00000568373 STAG3L1P0CL83 205 aa19.31■□□□□ 0.68
SMPD3-211ENST00000568373 CHRNA3P32297 505 aa19.31■□□□□ 0.68
SMPD3-211ENST00000568373 HSPA9P38646 679 aaKnown RBP19.31■□□□□ 0.68
SMPD3-211ENST00000568373 GRIK4Q16099 956 aa19.31■□□□□ 0.68
SMPD3-211ENST00000568373 MMS22LQ6ZRQ5 1243 aa19.31■□□□□ 0.68
SMPD3-211ENST00000568373 ZDHHC14Q8IZN3 488 aa19.31■□□□□ 0.68
SMPD3-211ENST00000568373 IQCKQ8N0W5 287 aa19.31■□□□□ 0.68
SMPD3-211ENST00000568373 OR6J1Q8NGC5 347 aa19.31■□□□□ 0.68
SMPD3-211ENST00000568373 NPLOC4Q8TAT6 608 aa19.31■□□□□ 0.68
SMPD3-211ENST00000568373 RUFY1Q96T51 708 aa19.31■□□□□ 0.68
SMPD3-211ENST00000568373 PLVAPQ9BX97 442 aa19.31■□□□□ 0.68
SMPD3-211ENST00000568373 FAM204AQ9H8W3 233 aa19.31■□□□□ 0.68
SMPD3-211ENST00000568373 FAM114A2Q9NRY5 505 aa19.31■□□□□ 0.68
SMPD3-211ENST00000568373 OPA1O60313 960 aa19.31■□□□□ 0.68
SMPD3-211ENST00000568373 LSM8O95777 96 aaKnown RBP19.31■□□□□ 0.68
SMPD3-211ENST00000568373 WEE2P0C1S8 567 aa19.31■□□□□ 0.68
SMPD3-211ENST00000568373 MAMLD1Q13495 774 aa19.31■□□□□ 0.68
SMPD3-211ENST00000568373 DGKDQ16760 1214 aa19.31■□□□□ 0.68
SMPD3-211ENST00000568373 CFAP58Q5T655 872 aa19.31■□□□□ 0.68
SMPD3-211ENST00000568373 IQSEC1Q6DN90 963 aa19.31■□□□□ 0.68
SMPD3-211ENST00000568373 PLEKHA7Q6IQ23 1121 aa19.31■□□□□ 0.68
SMPD3-211ENST00000568373 ZIM3Q96PE6 472 aa19.31■□□□□ 0.68
SMPD3-211ENST00000568373 TRIM51Q9BSJ1 452 aa19.31■□□□□ 0.68
SMPD3-211ENST00000568373 NEUROG2Q9H2A3 272 aa19.31■□□□□ 0.68
SMPD3-211ENST00000568373 MTUS1Q9ULD2 1270 aa19.31■□□□□ 0.68
SMPD3-211ENST00000568373 SCINQ9Y6U3 715 aa19.31■□□□□ 0.68
SMPD3-211ENST00000568373 ZNF236Q9UL36 1845 aa19.3■□□□□ 0.68
SMPD3-211ENST00000568373 SLC15A5A6NIM6 579 aa19.3■□□□□ 0.68
SMPD3-211ENST00000568373 PROSCO94903 275 aa19.3■□□□□ 0.68
SMPD3-211ENST00000568373 NFICP08651 508 aa19.3■□□□□ 0.68
SMPD3-211ENST00000568373 ARF4P18085 180 aaPredicted RBP19.3■□□□□ 0.68
SMPD3-211ENST00000568373 MMP8P22894 467 aa19.3■□□□□ 0.68
SMPD3-211ENST00000568373 MARCH8Q5T0T0 291 aa19.3■□□□□ 0.68
SMPD3-211ENST00000568373 SCARA5Q6ZMJ2 495 aa19.3■□□□□ 0.68
SMPD3-211ENST00000568373 GOLGA6L1Q8N7Z2 621 aa19.3■□□□□ 0.68
SMPD3-211ENST00000568373 NLRP7Q8WX94 980 aa19.3■□□□□ 0.68
SMPD3-211ENST00000568373 MAGOHBQ96A72 148 aaKnown RBP19.3■□□□□ 0.68
SMPD3-211ENST00000568373 C18orf8Q96DM3 657 aa19.3■□□□□ 0.68
SMPD3-211ENST00000568373 CPB2Q96IY4 423 aa19.3■□□□□ 0.68
SMPD3-211ENST00000568373 PCYOX1Q9UHG3 505 aa19.3■□□□□ 0.68
SMPD3-211ENST00000568373 SIX4Q9UIU6 781 aa19.3■□□□□ 0.68
SMPD3-211ENST00000568373 LACTBL1A8MY62 500 aa19.29■□□□□ 0.68
SMPD3-211ENST00000568373 MEFVO15553 781 aaPredicted RBP19.29■□□□□ 0.68
SMPD3-211ENST00000568373 BRD2P25440 801 aaKnown RBP19.29■□□□□ 0.68
SMPD3-211ENST00000568373 YWHAEP62258 255 aaKnown RBP19.29■□□□□ 0.68
SMPD3-211ENST00000568373 CYP1B1Q16678 543 aa19.29■□□□□ 0.68
SMPD3-211ENST00000568373 ZNF394Q53GI3 561 aa19.29■□□□□ 0.68
SMPD3-211ENST00000568373 JAMLQ86YT9 394 aa19.29■□□□□ 0.68
SMPD3-211ENST00000568373 C1orf127Q8N9H9 656 aa19.29■□□□□ 0.68
SMPD3-211ENST00000568373 ERP44Q9BS26 406 aa19.29■□□□□ 0.68
SMPD3-211ENST00000568373 TCRBV7S2A1N4TA0A589 114 aa19.29■□□□□ 0.68
SMPD3-211ENST00000568373 ADCY6O43306 1168 aa19.29■□□□□ 0.68
SMPD3-211ENST00000568373 KRT19P08727 400 aa19.29■□□□□ 0.68
SMPD3-211ENST00000568373 KYAT1Q16773 422 aa19.29■□□□□ 0.68
SMPD3-211ENST00000568373 KCTD19Q17RG1 926 aaPredicted RBP19.29■□□□□ 0.68
SMPD3-211ENST00000568373 DUPD1Q68J44 220 aa19.29■□□□□ 0.68
SMPD3-211ENST00000568373 JADE1Q6IE81 842 aa19.29■□□□□ 0.68
SMPD3-211ENST00000568373 PIK3R5Q8WYR1 880 aa19.29■□□□□ 0.68
SMPD3-211ENST00000568373 DPH5Q9H2P9 285 aa19.29■□□□□ 0.68
SMPD3-211ENST00000568373 ASB7Q9H672 318 aa19.29■□□□□ 0.68
SMPD3-211ENST00000568373 PARVAQ9NVD7 372 aa19.29■□□□□ 0.68
SMPD3-211ENST00000568373 SLC5A4Q9NY91 659 aa19.29■□□□□ 0.68
SMPD3-211ENST00000568373 PCNTO95613 3336 aa19.29■□□□□ 0.68
SMPD3-211ENST00000568373 GOLGA8KD6RF30 607 aa19.28■□□□□ 0.68
SMPD3-211ENST00000568373 PTGIRP43119 386 aa19.28■□□□□ 0.68
SMPD3-211ENST00000568373 SIX1Q15475 284 aaPredicted RBP19.28■□□□□ 0.68
SMPD3-211ENST00000568373 KIAA0319LQ8IZA0 1049 aa19.28■□□□□ 0.68
SMPD3-211ENST00000568373 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.28■□□□□ 0.68
SMPD3-211ENST00000568373 LRRC45Q96CN5 670 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms