RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-208	ENST00000563911	GRAMD4	Q6IC98	578 aa		7.18	□□□□□ -1.26
HERPUD1-208	ENST00000563911	CNKSR3	Q6P9H4	555 aa		7.18	□□□□□ -1.26
HERPUD1-208	ENST00000563911	TRMT10B	Q6PF06	316 aa	Known RBP	7.18	□□□□□ -1.26
HERPUD1-208	ENST00000563911		Q7L0L9	218 aa		7.18	□□□□□ -1.26
HERPUD1-208	ENST00000563911	LYSMD2	Q8IV50	215 aa		7.18	□□□□□ -1.26
HERPUD1-208	ENST00000563911	CMTR2	Q8IYT2	770 aa	Known RBP	7.18	□□□□□ -1.26
HERPUD1-208	ENST00000563911	PPM1N	Q8N819	430 aa		7.18	□□□□□ -1.26
HERPUD1-208	ENST00000563911	CDYL2	Q8N8U2	506 aa		7.18	□□□□□ -1.26
HERPUD1-208	ENST00000563911	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	7.18	□□□□□ -1.26	5e-16	■■■■□ 23.7
HERPUD1-208	ENST00000563911	HSPBAP1	Q96EW2	488 aa		7.18	□□□□□ -1.26
HERPUD1-208	ENST00000563911	HIST1H2AH	Q96KK5	128 aa		7.18	□□□□□ -1.26
HERPUD1-208	ENST00000563911	HIST1H2AJ	Q99878	128 aa		7.18	□□□□□ -1.26
HERPUD1-208	ENST00000563911	PITHD1	Q9GZP4	211 aa	Predicted RBP	7.18	□□□□□ -1.26
HERPUD1-208	ENST00000563911	TMEM39B	Q9GZU3	492 aa		7.18	□□□□□ -1.26
HERPUD1-208	ENST00000563911	TDRD3	Q9H7E2	651 aa	Known RBP	7.18	□□□□□ -1.26
HERPUD1-208	ENST00000563911	IFT122	Q9HBG6	1241 aa		7.18	□□□□□ -1.26
HERPUD1-208	ENST00000563911	VEZT	Q9HBM0	779 aa		7.18	□□□□□ -1.26
HERPUD1-208	ENST00000563911	ZNF70	Q9UC06	446 aa	Predicted RBP	7.18	□□□□□ -1.26
HERPUD1-208	ENST00000563911	STAP2	Q9UGK3	403 aa		7.18	□□□□□ -1.26
HERPUD1-208	ENST00000563911	MAP3K2	Q9Y2U5	619 aa		7.18	□□□□□ -1.26
HERPUD1-208	ENST00000563911	PCDHB6	Q9Y5E3	794 aa		7.18	□□□□□ -1.26
HERPUD1-208	ENST00000563911	MYO3B	Q8WXR4	1341 aa		7.18	□□□□□ -1.26
HERPUD1-208	ENST00000563911	TLR2	O60603	784 aa		7.17	□□□□□ -1.26
HERPUD1-208	ENST00000563911	CHGB	P05060	677 aa		7.17	□□□□□ -1.26
HERPUD1-208	ENST00000563911	CSF1R	P07333	972 aa		7.17	□□□□□ -1.26
HERPUD1-208	ENST00000563911	IL1R1	P14778	569 aa		7.17	□□□□□ -1.26
HERPUD1-208	ENST00000563911	XPA	P23025	273 aa	Predicted RBP	7.17	□□□□□ -1.26
HERPUD1-208	ENST00000563911	GLDC	P23378	1020 aa		7.17	□□□□□ -1.26
HERPUD1-208	ENST00000563911	MLLT6	P55198	1093 aa	Predicted RBP	7.17	□□□□□ -1.26
HERPUD1-208	ENST00000563911	CHRND	Q07001	517 aa		7.17	□□□□□ -1.26
HERPUD1-208	ENST00000563911	DGKD	Q16760	1214 aa		7.17	□□□□□ -1.26
HERPUD1-208	ENST00000563911	FAM102B	Q5T8I3	360 aa		7.17	□□□□□ -1.26
HERPUD1-208	ENST00000563911	C17orf99	Q6UX52	265 aa		7.17	□□□□□ -1.26
HERPUD1-208	ENST00000563911	BMP8A	Q7Z5Y6	402 aa		7.17	□□□□□ -1.26
HERPUD1-208	ENST00000563911	FAM129C	Q86XR2	697 aa		7.17	□□□□□ -1.26
HERPUD1-208	ENST00000563911	TPH2	Q8IWU9	490 aa		7.17	□□□□□ -1.26
HERPUD1-208	ENST00000563911	OR5AN1	Q8NGI8	311 aa		7.17	□□□□□ -1.26
HERPUD1-208	ENST00000563911	FNIP1	Q8TF40	1166 aa		7.17	□□□□□ -1.26
HERPUD1-208	ENST00000563911	PWWP2A	Q96N64	755 aa		7.17	□□□□□ -1.26
HERPUD1-208	ENST00000563911	CDY2A	Q9Y6F7	541 aa		7.17	□□□□□ -1.26
HERPUD1-208	ENST00000563911	ADGRA2	Q96PE1	1338 aa		7.17	□□□□□ -1.26
HERPUD1-208	ENST00000563911	EYS	Q5T1H1	3165 aa		7.17	□□□□□ -1.26
HERPUD1-208	ENST00000563911	COL1A1	P02452	1464 aa	Predicted RBP	7.17	□□□□□ -1.26
HERPUD1-208	ENST00000563911	PI4KAP2	A4QPH2	592 aa		7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	TCP10L2	B9ZVM9	353 aa		7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	CUTA	O60888	179 aa		7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	NDUFS2	O75306	463 aa		7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	KNG1	P01042	644 aa		7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	CELA3B	P08861	270 aa		7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	CCL5	P13501	91 aa		7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	VCAM1	P19320	739 aa		7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	C5AR1	P21730	350 aa		7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	CACNB3	P54284	484 aa		7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	ANTXR2	P58335	489 aa		7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	MESP2	Q0VG99	397 aa		7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	SUPT20HL1	Q3ZLR7	823 aa		7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	MBNL2	Q5VZF2	373 aa	Known RBP	7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	MCTP1	Q6DN14	999 aa		7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	ATG14	Q6ZNE5	492 aa		7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	UBE3B	Q7Z3V4	1068 aa		7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	C14orf80	Q86SX3	495 aa		7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	SLC41A1	Q8IVJ1	513 aa		7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	PI4KAP1	Q8N8J0	262 aa		7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	TSPEAR	Q8WU66	669 aa		7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	ZKSCAN4	Q969J2	545 aa	Predicted RBP	7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	DYDC2	Q96IM9	177 aa		7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	FAM84A	Q96KN4	292 aa		7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	C8orf48	Q96LL4	319 aa		7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	CDC5L	Q99459	802 aa	Known RBP	7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	ACE2	Q9BYF1	805 aa	Predicted RBP	7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	SAE1	Q9UBE0	346 aa	Predicted RBP	7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	CPA4	Q9UI42	421 aa		7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	FBXO10	Q9UK96	956 aa		7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	CDC42EP3	Q9UKI2	254 aa		7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	CNOT6	Q9ULM6	557 aa	Known RBP	7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	PNMA8B	Q9ULN7	279 aa	Predicted RBP	7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911	GABRQ	Q9UN88	632 aa		7.16	□□□□□ -1.26
HERPUD1-208	ENST00000563911		A0A0G2JNJ9	132 aa		7.15	□□□□□ -1.26
HERPUD1-208	ENST00000563911	NRP2	O60462	931 aa		7.15	□□□□□ -1.26
HERPUD1-208	ENST00000563911	MAF	O75444	373 aa	Predicted RBP	7.15	□□□□□ -1.26
HERPUD1-208	ENST00000563911	FARP2	O94887	1054 aa	Predicted RBP	7.15	□□□□□ -1.26
HERPUD1-208	ENST00000563911	GJB1	P08034	283 aa		7.15	□□□□□ -1.26
HERPUD1-208	ENST00000563911	PI3	P19957	117 aa		7.15	□□□□□ -1.26
HERPUD1-208	ENST00000563911	CYP2C19	P33261	490 aa		7.15	□□□□□ -1.26
HERPUD1-208	ENST00000563911	GPR15	P49685	360 aa		7.15	□□□□□ -1.26
HERPUD1-208	ENST00000563911	MMP14	P50281	582 aa		7.15	□□□□□ -1.26
HERPUD1-208	ENST00000563911	SSPN	Q14714	243 aa		7.15	□□□□□ -1.26
HERPUD1-208	ENST00000563911	MLC1	Q15049	377 aa		7.15	□□□□□ -1.26
HERPUD1-208	ENST00000563911	EPHA10	Q5JZY3	1008 aa		7.15	□□□□□ -1.26
HERPUD1-208	ENST00000563911	OTUD7B	Q6GQQ9	843 aa		7.15	□□□□□ -1.26
HERPUD1-208	ENST00000563911	KSR2	Q6VAB6	950 aa		7.15	□□□□□ -1.26
HERPUD1-208	ENST00000563911	C15orf52	Q6ZUT6	534 aa	Known RBP	7.15	□□□□□ -1.26
HERPUD1-208	ENST00000563911	GAREM2	Q75VX8	874 aa		7.15	□□□□□ -1.26
HERPUD1-208	ENST00000563911	TCEAL8	Q8IYN2	117 aa		7.15	□□□□□ -1.26
HERPUD1-208	ENST00000563911	MIER2	Q8N344	545 aa		7.15	□□□□□ -1.26
HERPUD1-208	ENST00000563911	L2HGDH	Q9H9P8	463 aa		7.15	□□□□□ -1.26
HERPUD1-208	ENST00000563911	SPATA6	Q9NWH7	488 aa	Predicted RBP	7.15	□□□□□ -1.26
HERPUD1-208	ENST00000563911		Q9UFV3	132 aa		7.15	□□□□□ -1.26
HERPUD1-208	ENST00000563911	SRRD	Q9UH36	339 aa		7.15	□□□□□ -1.26
HERPUD1-208	ENST00000563911	EVL	Q9UI08	416 aa	Predicted RBP	7.15	□□□□□ -1.26

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