RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 CYP4A11Q02928 519 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 CHRNB3Q05901 458 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 TFDP2Q14188 446 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 ELMSAN1Q6PJG2 1045 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 DQX1Q8TE96 717 aaKnown RBP3.86□□□□□ -1.79
ATXN3-248ENST00000558190 RASSF5Q8WWW0 418 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 PYDC1Q8WXC3 89 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 GPATCH1Q9BRR8 931 aaKnown RBP3.86□□□□□ -1.79
ATXN3-248ENST00000558190 XPO7Q9UIA9 1087 aaKnown RBP3.86□□□□□ -1.79
ATXN3-248ENST00000558190 ABATP80404 500 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 TCP10Q12799 353 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 PUM3Q15397 648 aaKnown RBP3.86□□□□□ -1.79
ATXN3-248ENST00000558190 MOGQ16653 247 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 ABCB10Q9NRK6 738 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 TLR3O15455 904 aaKnown RBP3.86□□□□□ -1.79
ATXN3-248ENST00000558190 PKNOX1P55347 436 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 TBC1D10BQ4KMP7 808 aaPredicted RBP3.86□□□□□ -1.79
ATXN3-248ENST00000558190 DNAAF5Q86Y56 855 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 VPS50Q96JG6 964 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 SLC38A10Q9HBR0 1119 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 SNX3O60493 162 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 HIF1AQ16665 826 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 TMEM35BQ8NCS4 154 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 SH3TC2Q8TF17 1288 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 EYA3Q99504 573 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 PCDHA6Q9UN73 950 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 PCDHA8Q9Y5H6 950 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 NKTRP30414 1462 aaKnown RBP3.86□□□□□ -1.79
ATXN3-248ENST00000558190 A0A1W2PQ72 361 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 GOLGA8CPA6NN73 597 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 SLC16A4O15374 487 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 TNFRSF21O75509 655 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 ATP6V1C1P21283 382 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 NEDD8Q15843 81 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 RHOT1Q8IXI2 618 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 ATXN2LQ8WWM7 1075 aaKnown RBP3.86□□□□□ -1.79
ATXN3-248ENST00000558190 SLC10A4Q96EP9 437 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 C6orf62Q9GZU0 229 aaPredicted RBP3.86□□□□□ -1.79
ATXN3-248ENST00000558190 DAPK2Q9UIK4 370 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 ZNF112Q9UJU3 913 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 TDRKHQ9Y2W6 561 aaKnown RBP3.86□□□□□ -1.79
ATXN3-248ENST00000558190 KIF24Q5T7B8 1368 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 ZC3H11AO75152 810 aaKnown RBP eCLIP3.86□□□□□ -1.79
ATXN3-248ENST00000558190 LYNP07948 512 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 TRIM49P0CI25 452 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 TRIM49CP0CI26 452 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 PSMC3P17980 439 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 HSPA13P48723 471 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 USP46P62068 366 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 RUNDC3AQ59EK9 446 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 DEPDC1Q5TB30 811 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 C4orf50Q6ZRC1 276 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 HDAC2Q92769 488 aaKnown RBP3.86□□□□□ -1.79
ATXN3-248ENST00000558190 GRIP2Q9C0E4 1043 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 GPBP1L1Q9HC44 474 aaPredicted RBP3.86□□□□□ -1.79
ATXN3-248ENST00000558190 SPATA2Q9UM82 520 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 CLASP2O75122 1294 aaKnown RBP3.86□□□□□ -1.79
ATXN3-248ENST00000558190 TMEM237Q96Q45 408 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 ZNF184Q99676 751 aaPredicted RBP3.86□□□□□ -1.79
ATXN3-248ENST00000558190 PON1P27169 355 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 MTM1Q13496 603 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 STK32CQ86UX6 486 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 C18orf8Q96DM3 657 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 GCOM2Q9BZD3 368 aaPredicted RBP3.86□□□□□ -1.79
ATXN3-248ENST00000558190 CEP44Q9C0F1 390 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 COPS7BQ9H9Q2 264 aaPredicted RBP3.86□□□□□ -1.79
ATXN3-248ENST00000558190 NIP7Q9Y221 180 aaKnown RBP eCLIP3.86□□□□□ -1.79
ATXN3-248ENST00000558190 SOS2Q07890 1332 aaPredicted RBP3.86□□□□□ -1.79
ATXN3-248ENST00000558190 KRT36O76013 467 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 RPA1P27694 616 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 ADAM17P78536 824 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 UNC13DQ70J99 1090 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 NLRP10Q86W26 655 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 VPS35Q96QK1 796 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 TRIM8Q9BZR9 551 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 POLR1BQ9H9Y6 1135 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 SLC9A2Q9UBY0 812 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 DSEQ9UL01 958 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 GOLGA3Q08378 1498 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 DDX3YO15523 660 aaKnown RBP3.86□□□□□ -1.79
ATXN3-248ENST00000558190 PIK3R1P27986 724 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 NSUN2Q08J23 767 aaKnown RBP eCLIP3.86□□□□□ -1.79
ATXN3-248ENST00000558190 GIN1Q9NXP7 522 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 UBN2Q6ZU65 1347 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 USP17L5A8MUK1 530 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 IMPDH2P12268 514 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 SLC15A2Q16348 729 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 KIF19Q2TAC6 998 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 LPCAT4Q643R3 524 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 HORMAD1Q86X24 394 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 ARID3BQ8IVW6 561 aaPredicted RBP3.86□□□□□ -1.79
ATXN3-248ENST00000558190 FEZF2Q8TBJ5 459 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 ANO3Q9BYT9 981 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 PRDM2Q13029 1718 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 DDX3XO00571 662 aaKnown RBP eCLIP3.86□□□□□ -1.79
ATXN3-248ENST00000558190 RTP1P59025 263 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 TUBA1BP68363 451 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 TUBA1AQ71U36 451 aa3.86□□□□□ -1.79
ATXN3-248ENST00000558190 MAGEB16A2A368 324 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 CHURC1-FNTBB4DL54 471 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms