RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 GPD1P21695 349 aa18.27■□□□□ 0.52
PTPN21-208ENST00000556564 CCDC137Q6PK04 289 aaKnown RBP18.27■□□□□ 0.52
PTPN21-208ENST00000556564 ZNF467Q7Z7K2 595 aaPredicted RBP18.27■□□□□ 0.52
PTPN21-208ENST00000556564 NOVA2Q9UNW9 492 aaKnown RBP18.27■□□□□ 0.52
PTPN21-208ENST00000556564 ALDH2P05091 517 aa18.27■□□□□ 0.51
PTPN21-208ENST00000556564 ILDR1Q86SU0 546 aaPredicted RBP18.27■□□□□ 0.51
PTPN21-208ENST00000556564 CHSY1Q86X52 802 aa18.27■□□□□ 0.51
PTPN21-208ENST00000556564 RNF10Q8N5U6 811 aaKnown RBP18.27■□□□□ 0.51
PTPN21-208ENST00000556564 WHAMMQ8TF30 809 aa18.27■□□□□ 0.51
PTPN21-208ENST00000556564 USP20Q9Y2K6 914 aa18.27■□□□□ 0.51
PTPN21-208ENST00000556564 SLC4A7Q9Y6M7 1214 aa18.27■□□□□ 0.51
PTPN21-208ENST00000556564 TAC1P20366 129 aa18.27■□□□□ 0.51
PTPN21-208ENST00000556564 NUMBP49757 651 aa18.27■□□□□ 0.51
PTPN21-208ENST00000556564 MAPRE1Q15691 268 aaKnown RBP18.27■□□□□ 0.51
PTPN21-208ENST00000556564 CXCL17Q6UXB2 119 aa18.27■□□□□ 0.51
PTPN21-208ENST00000556564 TRIM42Q8IWZ5 723 aa18.27■□□□□ 0.51
PTPN21-208ENST00000556564 DBR1Q9UK59 544 aaKnown RBP18.27■□□□□ 0.51
PTPN21-208ENST00000556564 AMHP03971 560 aa18.26■□□□□ 0.51
PTPN21-208ENST00000556564 LGALS2P05162 132 aa18.26■□□□□ 0.51
PTPN21-208ENST00000556564 SATB1Q01826 763 aa18.26■□□□□ 0.51
PTPN21-208ENST00000556564 GJC2Q5T442 439 aaPredicted RBP18.26■□□□□ 0.51
PTPN21-208ENST00000556564 KLHDC7AQ5VTJ3 777 aa18.26■□□□□ 0.51
PTPN21-208ENST00000556564 CD302Q8IX05 232 aa18.26■□□□□ 0.51
PTPN21-208ENST00000556564 RCOR2Q8IZ40 523 aa18.26■□□□□ 0.51
PTPN21-208ENST00000556564 DNAJC6O75061 913 aa18.26■□□□□ 0.51
PTPN21-208ENST00000556564 ARSEP51690 589 aa18.26■□□□□ 0.51
PTPN21-208ENST00000556564 TMEM132BQ14DG7 1078 aa18.26■□□□□ 0.51
PTPN21-208ENST00000556564 SLC18A3Q16572 532 aa18.26■□□□□ 0.51
PTPN21-208ENST00000556564 HABP4Q5JVS0 413 aaKnown RBP18.26■□□□□ 0.51
PTPN21-208ENST00000556564 TMC7Q7Z402 723 aa18.26■□□□□ 0.51
PTPN21-208ENST00000556564 SLC5A5Q92911 643 aa18.26■□□□□ 0.51
PTPN21-208ENST00000556564 VPS11Q9H270 941 aa18.26■□□□□ 0.51
PTPN21-208ENST00000556564 CYP39A1Q9NYL5 469 aa18.26■□□□□ 0.51
PTPN21-208ENST00000556564 TIMM13Q9Y5L4 95 aaPredicted RBP18.26■□□□□ 0.51
PTPN21-208ENST00000556564 RPLP2P05387 115 aaKnown RBP18.26■□□□□ 0.51
PTPN21-208ENST00000556564 PCSK7Q16549 785 aa18.26■□□□□ 0.51
PTPN21-208ENST00000556564 NOL3O60936 208 aaKnown RBP18.26■□□□□ 0.51
PTPN21-208ENST00000556564 ATP1A1P05023 1023 aaKnown RBP18.26■□□□□ 0.51
PTPN21-208ENST00000556564 MBL2P11226 248 aaPredicted RBP18.26■□□□□ 0.51
PTPN21-208ENST00000556564 PDIA2Q13087 525 aaKnown RBP18.26■□□□□ 0.51
PTPN21-208ENST00000556564 SDE2Q6IQ49 451 aa18.26■□□□□ 0.51
PTPN21-208ENST00000556564 OTOP1Q7RTM1 612 aa18.26■□□□□ 0.51
PTPN21-208ENST00000556564 GSPT2Q8IYD1 628 aaKnown RBP18.26■□□□□ 0.51
PTPN21-208ENST00000556564 USP27XA6NNY8 438 aa18.25■□□□□ 0.51
PTPN21-208ENST00000556564 MAP3K7CLP57077 242 aa18.25■□□□□ 0.51
PTPN21-208ENST00000556564 PIGHQ14442 188 aaPredicted RBP18.25■□□□□ 0.51
PTPN21-208ENST00000556564 SHROOM1Q2M3G4 852 aaPredicted RBP18.25■□□□□ 0.51
PTPN21-208ENST00000556564 EFHC1Q5JVL4 640 aa18.25■□□□□ 0.51
PTPN21-208ENST00000556564 TAF1DQ9H5J8 278 aaPredicted RBP18.25■□□□□ 0.51
PTPN21-208ENST00000556564 ATICP31939 592 aa18.25■□□□□ 0.51
PTPN21-208ENST00000556564 CGRRF1Q99675 332 aa18.25■□□□□ 0.51
PTPN21-208ENST00000556564 CCDC85CA6NKD9 419 aa18.25■□□□□ 0.51
PTPN21-208ENST00000556564 BTG3Q14201 252 aaPredicted RBP18.25■□□□□ 0.51
PTPN21-208ENST00000556564 NR1I3Q14994 352 aa18.25■□□□□ 0.51
PTPN21-208ENST00000556564 MDH1BQ5I0G3 518 aa18.25■□□□□ 0.51
PTPN21-208ENST00000556564 C10orf67Q8IYJ2 551 aa18.25■□□□□ 0.51
PTPN21-208ENST00000556564 ARHGAP18Q8N392 663 aa18.25■□□□□ 0.51
PTPN21-208ENST00000556564 FBXO32Q969P5 355 aa18.25■□□□□ 0.51
PTPN21-208ENST00000556564 CYTH3O43739 400 aa18.25■□□□□ 0.51
PTPN21-208ENST00000556564 ACO1P21399 889 aaKnown RBP18.25■□□□□ 0.51
PTPN21-208ENST00000556564 POU5F1BQ06416 359 aa18.25■□□□□ 0.51
PTPN21-208ENST00000556564 RNF135Q8IUD6 432 aa18.25■□□□□ 0.51
PTPN21-208ENST00000556564 ATXN7L3BQ96GX2 97 aa18.25■□□□□ 0.51
PTPN21-208ENST00000556564 KRT82Q9NSB4 513 aa18.25■□□□□ 0.51
PTPN21-208ENST00000556564 CCDC78A2IDD5 438 aa18.25■□□□□ 0.51
PTPN21-208ENST00000556564 RASSF2P50749 326 aa18.25■□□□□ 0.51
PTPN21-208ENST00000556564 MAP2K5Q13163 448 aa18.25■□□□□ 0.51
PTPN21-208ENST00000556564 CELF3Q5SZQ8 465 aaKnown RBP18.25■□□□□ 0.51
PTPN21-208ENST00000556564 ZBED8Q8IZ13 594 aa18.25■□□□□ 0.51
PTPN21-208ENST00000556564 KLRG1Q96E93 195 aa18.25■□□□□ 0.51
PTPN21-208ENST00000556564 TRPV2Q9Y5S1 764 aa18.25■□□□□ 0.51
PTPN21-208ENST00000556564 SLC15A5A6NIM6 579 aa18.24■□□□□ 0.51
PTPN21-208ENST00000556564 P4HA2O15460 535 aa18.24■□□□□ 0.51
PTPN21-208ENST00000556564 SLITRK3O94933 977 aa18.24■□□□□ 0.51
PTPN21-208ENST00000556564 MED4Q9NPJ6 270 aa18.24■□□□□ 0.51
PTPN21-208ENST00000556564 H0Y626 953 aa18.24■□□□□ 0.51
PTPN21-208ENST00000556564 ZBTB39O15060 712 aa18.24■□□□□ 0.51
PTPN21-208ENST00000556564 PPM1NQ8N819 430 aa18.24■□□□□ 0.51
PTPN21-208ENST00000556564 IGFLR1Q9H665 355 aa18.24■□□□□ 0.51
PTPN21-208ENST00000556564 PLAAQ9Y263 795 aa18.24■□□□□ 0.51
PTPN21-208ENST00000556564 AFDNP55196 1824 aaKnown RBP18.24■□□□□ 0.51
PTPN21-208ENST00000556564 UBA1P22314 1058 aaKnown RBP18.24■□□□□ 0.51
PTPN21-208ENST00000556564 ZNF720Q7Z2F6 126 aa18.24■□□□□ 0.51
PTPN21-208ENST00000556564 SH3KBP1Q96B97 665 aa18.24■□□□□ 0.51
PTPN21-208ENST00000556564 ACSF2Q96CM8 615 aaPredicted RBP18.24■□□□□ 0.51
PTPN21-208ENST00000556564 FAM118BQ9BPY3 351 aa18.24■□□□□ 0.51
PTPN21-208ENST00000556564 TTC8Q8TAM2 541 aa18.24■□□□□ 0.51
PTPN21-208ENST00000556564 MKL1Q969V6 931 aa18.24■□□□□ 0.51
PTPN21-208ENST00000556564 SNF8Q96H20 258 aa18.24■□□□□ 0.51
PTPN21-208ENST00000556564 RNPC3Q96LT9 517 aaKnown RBP18.24■□□□□ 0.51
PTPN21-208ENST00000556564 PDGFDQ9GZP0 370 aaPredicted RBP18.24■□□□□ 0.51
PTPN21-208ENST00000556564 SGPL1O95470 568 aa18.24■□□□□ 0.51
PTPN21-208ENST00000556564 FKBP1BP68106 108 aa18.24■□□□□ 0.51
PTPN21-208ENST00000556564 ANKS1AQ92625 1134 aa18.24■□□□□ 0.51
PTPN21-208ENST00000556564 NUF2Q9BZD4 464 aa18.24■□□□□ 0.51
PTPN21-208ENST00000556564 PCDHB8Q9UN66 801 aa18.24■□□□□ 0.51
PTPN21-208ENST00000556564 SHPRHQ149N8 1683 aa18.23■□□□□ 0.51
PTPN21-208ENST00000556564 CD44P16070 742 aaKnown RBP18.23■□□□□ 0.51
PTPN21-208ENST00000556564 CHRNA3P32297 505 aa18.23■□□□□ 0.51
PTPN21-208ENST00000556564 CEP120Q8N960 986 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms