RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 LHX5Q9H2C1 402 aa11.66□□□□□ -0.54
PABPN1-203ENST00000553960 KANSL3Q9P2N6 904 aa11.66□□□□□ -0.54
PABPN1-203ENST00000553960 ADAMTS1Q9UHI8 967 aa11.66□□□□□ -0.54
PABPN1-203ENST00000553960 RTN2O75298 545 aa11.65□□□□□ -0.54
PABPN1-203ENST00000553960 CILPO75339 1184 aa11.65□□□□□ -0.54
PABPN1-203ENST00000553960 TMEM253P0C7T8 217 aa11.65□□□□□ -0.54
PABPN1-203ENST00000553960 ITGA4P13612 1032 aa11.65□□□□□ -0.54
PABPN1-203ENST00000553960 PRLRP16471 622 aa11.65□□□□□ -0.54
PABPN1-203ENST00000553960 CHRNB2P17787 502 aa11.65□□□□□ -0.54
PABPN1-203ENST00000553960 FGFR4P22455 802 aa11.65□□□□□ -0.54
PABPN1-203ENST00000553960 CD52P31358 61 aa11.65□□□□□ -0.54
PABPN1-203ENST00000553960 MAGEA1P43355 309 aa11.65□□□□□ -0.54
PABPN1-203ENST00000553960 GRIK3Q13003 919 aa11.65□□□□□ -0.54
PABPN1-203ENST00000553960 IFI16Q16666 785 aaKnown RBP11.65□□□□□ -0.54
PABPN1-203ENST00000553960 TDRD12Q587J7 1177 aaKnown RBP11.65□□□□□ -0.54
PABPN1-203ENST00000553960 C9orf57Q5W0N0 161 aa11.65□□□□□ -0.54
PABPN1-203ENST00000553960 CDR2LQ86X02 465 aaPredicted RBP11.65□□□□□ -0.54
PABPN1-203ENST00000553960 ECHDC2Q86YB7 292 aa11.65□□□□□ -0.54
PABPN1-203ENST00000553960 CRYBG2Q8N1P7 616 aa11.65□□□□□ -0.54
PABPN1-203ENST00000553960 TRIM58Q8NG06 486 aa11.65□□□□□ -0.54
PABPN1-203ENST00000553960 KIF12Q96FN5 646 aa11.65□□□□□ -0.54
PABPN1-203ENST00000553960 HPDLQ96IR7 371 aa11.65□□□□□ -0.54
PABPN1-203ENST00000553960 DNAI2Q9GZS0 605 aa11.65□□□□□ -0.54
PABPN1-203ENST00000553960 DEF6Q9H4E7 631 aa11.65□□□□□ -0.54
PABPN1-203ENST00000553960 RRAGDQ9NQL2 400 aaPredicted RBP11.65□□□□□ -0.54
PABPN1-203ENST00000553960 AVENQ9NQS1 362 aaPredicted RBP11.65□□□□□ -0.54
PABPN1-203ENST00000553960 TMEM161AQ9NX61 479 aa11.65□□□□□ -0.54
PABPN1-203ENST00000553960 LCMT1Q9UIC8 334 aa11.65□□□□□ -0.54
PABPN1-203ENST00000553960 BARX2Q9UMQ3 279 aaPredicted RBP11.65□□□□□ -0.54
PABPN1-203ENST00000553960 GINS2Q9Y248 185 aa11.65□□□□□ -0.54
PABPN1-203ENST00000553960 PCDHGC5Q9Y5F6 944 aa11.65□□□□□ -0.54
PABPN1-203ENST00000553960 CEP350Q5VT06 3117 aa11.65□□□□□ -0.54
PABPN1-203ENST00000553960 NCANO14594 1321 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 UMODL1Q5DID0 1318 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 ARHGEF37A1IGU5 675 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 KIAA0355O15063 1070 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 CYP26A1O43174 497 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 HOXA2O43364 376 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 KIF5CO60282 957 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 ITGB3P05106 788 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 THP07101 528 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 MYBL1P10243 752 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 GHRP10912 638 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 HARSP12081 509 aaKnown RBP11.64□□□□□ -0.55
PABPN1-203ENST00000553960 UNGP13051 313 aaPredicted RBP11.64□□□□□ -0.55
PABPN1-203ENST00000553960 PDE6CP51160 858 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 FMO1Q01740 532 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 CENPCQ03188 943 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 DSC1Q08554 894 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 FAAP100Q0VG06 881 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 ARHGAP29Q52LW3 1261 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 LMBRD2Q68DH5 695 aaPredicted RBP11.64□□□□□ -0.55
PABPN1-203ENST00000553960 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.64□□□□□ -0.55
PABPN1-203ENST00000553960 RTN4RL1Q86UN2 441 aaPredicted RBP11.64□□□□□ -0.55
PABPN1-203ENST00000553960 TOP6BLQ8N6T0 577 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 KIF18AQ8NI77 898 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 KAT5Q92993 513 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 TRIM11Q96F44 468 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 PPP1R16BQ96T49 567 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 ADAM2Q99965 735 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 LACRTQ9GZZ8 138 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 RNF39Q9H2S5 420 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 L2HGDHQ9H9P8 463 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 CYLDQ9NQC7 956 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 CISHQ9NSE2 258 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 TSKSQ9UJT2 592 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 MYH10P35580 1976 aa11.64□□□□□ -0.55
PABPN1-203ENST00000553960 DNAH12Q6ZR08 3092 aa11.63□□□□□ -0.55
PABPN1-203ENST00000553960 ARL5CA6NH57 179 aa11.63□□□□□ -0.55
PABPN1-203ENST00000553960 GABRDO14764 452 aa11.63□□□□□ -0.55
PABPN1-203ENST00000553960 MGEA5O60502 916 aa11.63□□□□□ -0.55
PABPN1-203ENST00000553960 EFCAB14O75071 495 aa11.63□□□□□ -0.55
PABPN1-203ENST00000553960 CYP11A1P05108 521 aa11.63□□□□□ -0.55
PABPN1-203ENST00000553960 PFKMP08237 780 aa11.63□□□□□ -0.55
PABPN1-203ENST00000553960 H2AFZP0C0S5 128 aa11.63□□□□□ -0.55
PABPN1-203ENST00000553960 TNFAIP3P21580 790 aa11.63□□□□□ -0.55
PABPN1-203ENST00000553960 POLR2BP30876 1174 aaKnown RBP11.63□□□□□ -0.55
PABPN1-203ENST00000553960 CHMP4BP1P59074 171 aa11.63□□□□□ -0.55
PABPN1-203ENST00000553960 OSTNP61366 133 aa11.63□□□□□ -0.55
PABPN1-203ENST00000553960 GFPT1Q06210 699 aaPredicted RBP11.63□□□□□ -0.55
PABPN1-203ENST00000553960 NFX1Q12986 1120 aaKnown RBP11.63□□□□□ -0.55
PABPN1-203ENST00000553960 CNGA2Q16280 664 aa11.63□□□□□ -0.55
PABPN1-203ENST00000553960 ARHGAP44Q17R89 818 aa11.63□□□□□ -0.55
PABPN1-203ENST00000553960 WDR72Q3MJ13 1102 aa11.63□□□□□ -0.55
PABPN1-203ENST00000553960 SV2CQ496J9 727 aa11.63□□□□□ -0.55
PABPN1-203ENST00000553960 H2AFVQ71UI9 128 aa11.63□□□□□ -0.55
PABPN1-203ENST00000553960 SLFN11Q7Z7L1 901 aa11.63□□□□□ -0.55
PABPN1-203ENST00000553960 NOP9Q86U38 636 aaKnown RBP11.63□□□□□ -0.55
PABPN1-203ENST00000553960 SLC47A2Q86VL8 602 aa11.63□□□□□ -0.55
PABPN1-203ENST00000553960 PHF13Q86YI8 300 aaPredicted RBP11.63□□□□□ -0.55
PABPN1-203ENST00000553960 RHOT2Q8IXI1 618 aa11.63□□□□□ -0.55
PABPN1-203ENST00000553960 TMEM86AQ8N2M4 240 aa11.63□□□□□ -0.55
PABPN1-203ENST00000553960 ACRBPQ8NEB7 543 aa11.63□□□□□ -0.55
PABPN1-203ENST00000553960 LNX1Q8TBB1 728 aaPredicted RBP11.63□□□□□ -0.55
PABPN1-203ENST00000553960 WHAMMQ8TF30 809 aa11.63□□□□□ -0.55
PABPN1-203ENST00000553960 STK32AQ8WU08 396 aa11.63□□□□□ -0.55
PABPN1-203ENST00000553960 SEPT8Q92599 483 aa11.63□□□□□ -0.55
PABPN1-203ENST00000553960 DESI2Q9BSY9 194 aa11.63□□□□□ -0.55
PABPN1-203ENST00000553960 PI4K2AQ9BTU6 479 aa11.63□□□□□ -0.55
PABPN1-203ENST00000553960 RSAD1Q9HA92 442 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms