RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 PPEF2O14830 753 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 N4BP3O15049 544 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 SLC16A4O15374 487 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 MYL4P12829 197 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 FGFR3P22607 806 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 FCARP24071 287 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 TOB1P50616 345 aaPredicted RBP7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 STARD6P59095 220 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 ROR1Q01973 937 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 MTAPQ13126 283 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 FZD5Q13467 585 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 RAB33AQ14088 237 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 CCDC6Q16204 474 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 MAPK6Q16659 721 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 UPP1Q16831 310 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 WDR44Q5JSH3 913 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 FAM78AQ5JUQ0 283 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 ZBTB41Q5SVQ8 909 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 FAM43BQ6ZT52 329 aaPredicted RBP7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 DGLUCYQ7Z3D6 616 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 ZBTB8OSQ8IWT0 167 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 EXOC8Q8IYI6 725 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 HACE1Q8IYU2 909 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 TTC9BQ8N6N2 239 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 C4orf32Q8N8J7 132 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 STKLD1Q8NE28 680 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 PGLYRP2Q96PD5 576 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 HAPLN2Q9GZV7 340 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 CDT1Q9H211 546 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 CRISPLD1Q9H336 500 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 CYP4F11Q9HBI6 524 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 BRMS1Q9HCU9 246 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 PARD6AQ9NPB6 346 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 SLC2A4RGQ9NR83 387 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 RBM12Q9NTZ6 932 aaKnown RBP7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 DDX19AQ9NUU7 478 aaKnown RBP7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 TUBGCP4Q9UGJ1 667 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 RALYQ9UKM9 306 aaKnown RBP7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 SSX2IPQ9Y2D8 614 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 PCDHB6Q9Y5E3 794 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 CACNA1BQ00975 2339 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 CFAP47Q6ZTR5 3102 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 PODXLO00592 558 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 PRRG1O14668 218 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 LAMTOR5O43504 91 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 HIP1RO75146 1068 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 MOSPD3O75425 235 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 VNN2O95498 520 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 OR52Z1P0C646 297 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 TNFSF9P41273 254 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 NPTX2P47972 431 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 POU5F1BQ06416 359 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 MAPK7Q13164 816 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 TRIM29Q14134 588 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 TTC38Q5R3I4 469 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 HEATR6Q6AI08 1181 aaKnown RBP7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 SCARA3Q6AZY7 606 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 PHLDB3Q6NSJ2 640 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 LRRC15Q8TF66 581 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 WASF1Q92558 559 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 ZFYVE19Q96K21 471 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 MRGPRX2Q96LB1 330 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 CNTNAP3BQ96NU0 1288 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 NACC1Q96RE7 527 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 TMEM209Q96SK2 561 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 NAP1L4Q99733 375 aaKnown RBP7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 ACO2Q99798 780 aaKnown RBP7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 POLR3CQ9BUI4 534 aaPredicted RBP7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 NFKBIZQ9BYH8 718 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 CNTNAP3Q9BZ76 1288 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 SMG9Q9H0W8 520 aaKnown RBP7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 TUFT1Q9NNX1 390 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 LTB4R2Q9NPC1 389 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 CEP72Q9P209 647 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 ANKFY1Q9P2R3 1169 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 MTRRQ9UBK8 725 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 PPME1Q9Y570 386 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 MIA3Q5JRA6 1907 aa7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 MAP1BP46821 2468 aaKnown RBP7.5□□□□□ -1.21
PRPF40B-214ENST00000551320 TISP43B9A030 160 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 K7ERI5 159 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 ABLIM1O14639 778 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 XYLBO75191 536 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 HNRNPA1P09651 372 aaKnown RBP eCLIP7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 RPA1P27694 616 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 GDI1P31150 447 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 NAMPTP43490 491 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 PXNP49023 591 aaPredicted RBP7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 SATB1Q01826 763 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 ADCY1Q08828 1119 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 TWF1Q12792 350 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 FOXC1Q12948 553 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 GAS6Q14393 721 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 DHX8Q14562 1220 aaKnown RBP7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 ARID5BQ14865 1188 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 TEAD2Q15562 447 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 FAM187BQ17R55 369 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 ZNF568Q3ZCX4 644 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 PRSS36Q5K4E3 855 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms