RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 EXTL3O43909 919 aa14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 CYP1A2P05177 515 aa14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 EDN1P05305 212 aa14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 KCNA3P22001 575 aa14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 WDR72Q3MJ13 1102 aa14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 DCAF15Q66K64 600 aa14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 ZC3H18Q86VM9 953 aaKnown RBP14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 SPOCK2Q92563 424 aa14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 ZNF408Q9H9D4 720 aa14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 HOMER3Q9NSC5 361 aa14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 KLC4Q9NSK0 619 aa14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 LY75O60449 1722 aa14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 RARGP13631 454 aa14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 HSPA6P17066 643 aa14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 STAT5BP51692 787 aa14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 CLCN3P51790 818 aa14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 TMEM63BQ5T3F8 832 aa14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 ZNF606Q8WXB4 792 aa14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 DDX1Q92499 740 aaKnown RBP14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 FAM129AQ9BZQ8 928 aa14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 POLIQ9UNA4 740 aa14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 TRIM33Q9UPN9 1127 aa14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 B4GALT5O43286 388 aa14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 DRD4P21917 467 aa14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 TCF7P36402 384 aaPredicted RBP14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 SCTRP47872 440 aa14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 GCLCP48506 637 aaPredicted RBP14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 TREML2Q5T2D2 321 aa14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 RHOT1Q8IXI2 618 aa14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 SCYL3Q8IZE3 742 aa14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 AS3MTQ9HBK9 375 aa14.49□□□□□ -0.09
PRPF40B-209ENST00000548825 IRX3P78415 501 aaPredicted RBP14.48□□□□□ -0.09
PRPF40B-209ENST00000548825 BASP1P80723 227 aaKnown RBP14.48□□□□□ -0.09
PRPF40B-209ENST00000548825 DCLK3Q9C098 648 aa14.48□□□□□ -0.09
PRPF40B-209ENST00000548825 PCYOX1Q9UHG3 505 aa14.48□□□□□ -0.09
PRPF40B-209ENST00000548825 ZNF214Q9UL59 606 aaPredicted RBP14.48□□□□□ -0.09
PRPF40B-209ENST00000548825 THSD7AQ9UPZ6 1657 aa14.48□□□□□ -0.09
PRPF40B-209ENST00000548825 TBC1D12O60347 775 aa14.48□□□□□ -0.09
PRPF40B-209ENST00000548825 VNN1O95497 513 aa14.48□□□□□ -0.09
PRPF40B-209ENST00000548825 OATP04181 439 aa14.48□□□□□ -0.09
PRPF40B-209ENST00000548825 SUPT20HL2P0C7V6 817 aa14.48□□□□□ -0.09
PRPF40B-209ENST00000548825 MUTP22033 750 aa14.48□□□□□ -0.09
PRPF40B-209ENST00000548825 GAD2Q05329 585 aa14.48□□□□□ -0.09
PRPF40B-209ENST00000548825 MAMLD1Q13495 774 aa14.48□□□□□ -0.09
PRPF40B-209ENST00000548825 NFIL3Q16649 462 aa14.48□□□□□ -0.09
PRPF40B-209ENST00000548825 BBS9Q3SYG4 887 aa14.48□□□□□ -0.09
PRPF40B-209ENST00000548825 SUPT20HL1Q3ZLR7 823 aa14.48□□□□□ -0.09
PRPF40B-209ENST00000548825 ERMARDQ5T6L9 678 aa14.48□□□□□ -0.09
PRPF40B-209ENST00000548825 ERICH1Q86X53 443 aa14.48□□□□□ -0.09
PRPF40B-209ENST00000548825 ATL2Q8NHH9 583 aa14.48□□□□□ -0.09
PRPF40B-209ENST00000548825 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.48□□□□□ -0.09
PRPF40B-209ENST00000548825 TGS1Q96RS0 853 aaKnown RBP14.48□□□□□ -0.09
PRPF40B-209ENST00000548825 CNOT10Q9H9A5 744 aaKnown RBP14.48□□□□□ -0.09
PRPF40B-209ENST00000548825 PSMA2P25787 234 aa14.48□□□□□ -0.09
PRPF40B-209ENST00000548825 TMEM62Q0P6H9 643 aa14.48□□□□□ -0.09
PRPF40B-209ENST00000548825 DNAJC3Q13217 504 aa14.48□□□□□ -0.09
PRPF40B-209ENST00000548825 ZNF449Q6P9G9 518 aa14.48□□□□□ -0.09
PRPF40B-209ENST00000548825 BRCA2P51587 3418 aa14.47□□□□□ -0.09
PRPF40B-209ENST00000548825 GRIN3BO60391 1043 aa14.47□□□□□ -0.09
PRPF40B-209ENST00000548825 ATP4AP20648 1035 aa14.47□□□□□ -0.09
PRPF40B-209ENST00000548825 NFX1Q12986 1120 aaKnown RBP14.47□□□□□ -0.09
PRPF40B-209ENST00000548825 ZACNQ401N2 412 aa14.47□□□□□ -0.09
PRPF40B-209ENST00000548825 PAXIP1Q6ZW49 1069 aaPredicted RBP14.47□□□□□ -0.09
PRPF40B-209ENST00000548825 MYPNQ86TC9 1320 aa14.47□□□□□ -0.09
PRPF40B-209ENST00000548825 UBA3Q8TBC4 463 aa14.47□□□□□ -0.09
PRPF40B-209ENST00000548825 MFSD14AQ96MC6 490 aa14.47□□□□□ -0.09
PRPF40B-209ENST00000548825 CCDC77Q9BR77 488 aa14.47□□□□□ -0.09
PRPF40B-209ENST00000548825 NINJ2Q9NZG7 142 aa14.47□□□□□ -0.09
PRPF40B-209ENST00000548825 CETPP11597 493 aa14.47□□□□□ -0.09
PRPF40B-209ENST00000548825 ATP11AP98196 1134 aa14.47□□□□□ -0.09
PRPF40B-209ENST00000548825 PDIA2Q13087 525 aaKnown RBP14.47□□□□□ -0.09
PRPF40B-209ENST00000548825 ZNF699Q32M78 642 aa14.47□□□□□ -0.09
PRPF40B-209ENST00000548825 ZNF568Q3ZCX4 644 aa14.47□□□□□ -0.09
PRPF40B-209ENST00000548825 ANKRD20A8PQ5CZ79 823 aa14.47□□□□□ -0.09
PRPF40B-209ENST00000548825 FAXCQ5TGI0 409 aa14.47□□□□□ -0.09
PRPF40B-209ENST00000548825 CCDC89Q8N998 374 aa14.47□□□□□ -0.09
PRPF40B-209ENST00000548825 CCDC63Q8NA47 563 aa14.47□□□□□ -0.09
PRPF40B-209ENST00000548825 NETO2Q8NC67 525 aa14.47□□□□□ -0.09
PRPF40B-209ENST00000548825 RUNDC3BQ96NL0 473 aa14.47□□□□□ -0.09
PRPF40B-209ENST00000548825 STMN4Q9H169 189 aaPredicted RBP14.47□□□□□ -0.09
PRPF40B-209ENST00000548825 ELP3Q9H9T3 547 aa14.47□□□□□ -0.09
PRPF40B-209ENST00000548825 PNMA3Q9UL41 463 aa14.47□□□□□ -0.09
PRPF40B-209ENST00000548825 NAALADL1Q9UQQ1 740 aa14.47□□□□□ -0.09
PRPF40B-209ENST00000548825 CA4P22748 312 aa14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 RGS7P49802 495 aa14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 MYBPC2Q14324 1141 aa14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 HSDL1Q3SXM5 330 aa14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 FBXO16Q8IX29 292 aaPredicted RBP14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 TMEM192Q8IY95 271 aa14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 PSPC1Q8WXF1 523 aaKnown RBP14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 CD101Q93033 1021 aa14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 ART4Q93070 314 aa14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 GPRASP2Q96D09 838 aa14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 NSRP1Q9H0G5 558 aaKnown RBP14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 MRPL47Q9HD33 250 aaKnown RBP14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 NEU2Q9Y3R4 380 aa14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 CEP83Q9Y592 693 aa14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 COL11A2P13942 1736 aaPredicted RBP14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 NFKBIEO00221 500 aa14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 DKC1O60832 514 aaKnown RBP eCLIP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms