RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 OTOP3Q7RTS5 596 aa10.56□□□□□ -0.72
TNFRSF1A-214ENST00000543048 FEZF2Q8TBJ5 459 aa10.56□□□□□ -0.72
TNFRSF1A-214ENST00000543048 LEO1Q8WVC0 666 aaPredicted RBP10.56□□□□□ -0.72
TNFRSF1A-214ENST00000543048 SMG7Q92540 1137 aaKnown RBP10.56□□□□□ -0.72
TNFRSF1A-214ENST00000543048 ZNF707Q96C28 371 aaPredicted RBP10.56□□□□□ -0.72
TNFRSF1A-214ENST00000543048 SPATA32Q96LK8 384 aa10.56□□□□□ -0.72
TNFRSF1A-214ENST00000543048 IKZF4Q9H2S9 585 aa10.56□□□□□ -0.72
TNFRSF1A-214ENST00000543048 WDR6Q9NNW5 1121 aaKnown RBP10.56□□□□□ -0.72
TNFRSF1A-214ENST00000543048 C11orf16Q9NQ32 467 aa10.56□□□□□ -0.72
TNFRSF1A-214ENST00000543048 LIMD1Q9UGP4 676 aa10.56□□□□□ -0.72
TNFRSF1A-214ENST00000543048 FBXW11Q9UKB1 542 aa10.56□□□□□ -0.72
TNFRSF1A-214ENST00000543048 CDY1Q9Y6F8 540 aa10.56□□□□□ -0.72
TNFRSF1A-214ENST00000543048 FAM86C2PA6NEL3 165 aa10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 PRR33A8MZF0 331 aa10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 M0QZQ0 153 aa10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 PIRO00625 290 aa10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 TBC1D4O60343 1298 aa10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 ABLIM3O94929 683 aa10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 IL18RAPO95256 599 aa10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 SLFN14P0C7P3 912 aa10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 COL9A1P20849 921 aa10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 GUCY2FP51841 1108 aa10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 LILRA4P59901 499 aa10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 TMEM132DQ14C87 1099 aa10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 PPM1LQ5SGD2 360 aa10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 LIN9Q5TKA1 542 aa10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 SLC8B1Q6J4K2 584 aa10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 DSTYKQ6XUX3 929 aa10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 CCDC149Q6ZUS6 474 aa10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 UNC13DQ70J99 1090 aa10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 NT5DC4Q86YG4 428 aa10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 CEP57L1Q8IYX8 460 aa10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 TDRD5Q8NAT2 981 aaKnown RBP10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 ZNF461Q8TAF7 563 aa10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 ZNF507Q8TCN5 953 aa10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 FAM213AQ9BRX8 229 aa10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 FGFBP2Q9BYJ0 223 aa10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 KRTAP3-3Q9BYR6 98 aa10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 KRTAP3-2Q9BYR7 98 aa10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 SCAND2PQ9GZW5 306 aaPredicted RBP10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 USP25Q9UHP3 1055 aa10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 SERTAD1Q9UHV2 236 aa10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 C2CD2Q9Y426 696 aa10.55□□□□□ -0.72
TNFRSF1A-214ENST00000543048 A0A1B0GVL5 298 aa10.54□□□□□ -0.72
TNFRSF1A-214ENST00000543048 PVALEFA0A1B0GWK0 134 aa10.54□□□□□ -0.72
TNFRSF1A-214ENST00000543048 KIAA0391O15091 583 aaKnown RBP10.54□□□□□ -0.72
TNFRSF1A-214ENST00000543048 EXTL3O43909 919 aa10.54□□□□□ -0.72
TNFRSF1A-214ENST00000543048 XYLBO75191 536 aa10.54□□□□□ -0.72
TNFRSF1A-214ENST00000543048 OAZ2O95190 189 aa10.54□□□□□ -0.72
TNFRSF1A-214ENST00000543048 C8AP07357 584 aa10.54□□□□□ -0.72
TNFRSF1A-214ENST00000543048 HOXA9P31269 272 aa10.54□□□□□ -0.72
TNFRSF1A-214ENST00000543048 ELF1P32519 619 aa10.54□□□□□ -0.72
TNFRSF1A-214ENST00000543048 AFMP43652 599 aa10.54□□□□□ -0.72
TNFRSF1A-214ENST00000543048 AARSP49588 968 aaKnown RBP eCLIP10.54□□□□□ -0.72
TNFRSF1A-214ENST00000543048 ARPP19P56211 112 aa10.54□□□□□ -0.72
TNFRSF1A-214ENST00000543048 PTPN21Q16825 1174 aa10.54□□□□□ -0.72
TNFRSF1A-214ENST00000543048 CTXN3Q4LDR2 81 aa10.54□□□□□ -0.72
TNFRSF1A-214ENST00000543048 C9orf57Q5W0N0 161 aa10.54□□□□□ -0.72
TNFRSF1A-214ENST00000543048 TRIM67Q6ZTA4 783 aa10.54□□□□□ -0.72
TNFRSF1A-214ENST00000543048 TMEM130Q8N3G9 435 aa10.54□□□□□ -0.72
TNFRSF1A-214ENST00000543048 ZNF454Q8N9F8 522 aa10.54□□□□□ -0.72
TNFRSF1A-214ENST00000543048 CACTINQ8WUQ7 758 aaKnown RBP10.54□□□□□ -0.72
TNFRSF1A-214ENST00000543048 HPS3Q969F9 1004 aa10.54□□□□□ -0.72
TNFRSF1A-214ENST00000543048 OXCT2Q9BYC2 517 aaPredicted RBP10.54□□□□□ -0.72
TNFRSF1A-214ENST00000543048 BLZF1Q9H2G9 400 aa10.54□□□□□ -0.72
TNFRSF1A-214ENST00000543048 PCIF1Q9H4Z3 704 aa10.54□□□□□ -0.72
TNFRSF1A-214ENST00000543048 DPP3Q9NY33 737 aa10.54□□□□□ -0.72
TNFRSF1A-214ENST00000543048 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.54□□□□□ -0.722e-6■■□□□ 12.2
TNFRSF1A-214ENST00000543048 FBXL5Q9UKA1 691 aa10.54□□□□□ -0.72
TNFRSF1A-214ENST00000543048 MAFFQ9ULX9 164 aa10.54□□□□□ -0.72
TNFRSF1A-214ENST00000543048 ANO9A1A5B4 782 aa10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 ARHGEF37A1IGU5 675 aa10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 GOLGA8IPA6NC78 632 aa10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 TMEM221A6NGB7 291 aa10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 GOLGA8JA6NMD2 632 aa10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 M0R296 226 aa10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 TULP1O00294 542 aaPredicted RBP10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 EIF3DO15371 548 aaKnown RBP eCLIP10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 CCL16O15467 120 aa10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 NFICP08651 508 aa10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 POU2F2P09086 479 aa10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 CASP1P29466 404 aa10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 GBP2P32456 591 aaPredicted RBP10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 HOXD13P35453 343 aa10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 SNRPFP62306 86 aaKnown RBP10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 ROR1Q01973 937 aa10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 EHHADHQ08426 723 aa10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 SIGLEC14Q08ET2 396 aa10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 CUL4BQ13620 913 aa10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 FAM26FQ5R3K3 315 aa10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 TPGS2Q68CL5 300 aa10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 ZNF280DQ6N043 979 aa10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 EPM2AIP1Q7L775 607 aaPredicted RBP10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 USP37Q86T82 979 aa10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 UBALD2Q8IYN6 164 aa10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 GLIS3Q8NEA6 775 aa10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 ZSWIM2Q8NEG5 633 aa10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 SLC7A14Q8TBB6 771 aa10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 SAAL1Q96ER3 474 aa10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 PAGE5Q96GU1 130 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms