RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 FSTL4Q6MZW2 842 aa19.24■□□□□ 0.67
PVT1-220ENST00000524165 ADPGKQ9BRR6 497 aa19.24■□□□□ 0.67
PVT1-220ENST00000524165 PCDHA4Q9UN74 947 aa19.24■□□□□ 0.67
PVT1-220ENST00000524165 TRDMT1O14717 391 aaKnown RBP19.23■□□□□ 0.67
PVT1-220ENST00000524165 MEFVO15553 781 aaPredicted RBP19.23■□□□□ 0.67
PVT1-220ENST00000524165 GBP1P32455 592 aa19.23■□□□□ 0.67
PVT1-220ENST00000524165 SIM1P81133 766 aaPredicted RBP19.23■□□□□ 0.67
PVT1-220ENST00000524165 CACNB1Q02641 598 aaPredicted RBP19.23■□□□□ 0.67
PVT1-220ENST00000524165 LMAN2Q12907 356 aa19.23■□□□□ 0.67
PVT1-220ENST00000524165 GLRA4Q5JXX5 417 aa19.23■□□□□ 0.67
PVT1-220ENST00000524165 TMC8Q8IU68 726 aa19.23■□□□□ 0.67
PVT1-220ENST00000524165 NOSTRINQ8IVI9 506 aa19.23■□□□□ 0.67
PVT1-220ENST00000524165 GLIS3Q8NEA6 775 aa19.23■□□□□ 0.67
PVT1-220ENST00000524165 DYDC2Q96IM9 177 aa19.23■□□□□ 0.67
PVT1-220ENST00000524165 MKNK1Q9BUB5 465 aa19.23■□□□□ 0.67
PVT1-220ENST00000524165 CACNA2D2Q9NY47 1150 aa19.23■□□□□ 0.67
PVT1-220ENST00000524165 EVLQ9UI08 416 aaPredicted RBP19.23■□□□□ 0.67
PVT1-220ENST00000524165 KIAA1549LQ6ZVL6 1849 aa19.23■□□□□ 0.67
PVT1-220ENST00000524165 UPK3BL1B0FP48 263 aa19.22■□□□□ 0.67
PVT1-220ENST00000524165 PATE3B3GLJ2 98 aa19.22■□□□□ 0.67
PVT1-220ENST00000524165 UPK3BL2E5RIL1 263 aa19.22■□□□□ 0.67
PVT1-220ENST00000524165 M0R2N6 131 aa19.22■□□□□ 0.67
PVT1-220ENST00000524165 RNF40O75150 1001 aa19.22■□□□□ 0.67
PVT1-220ENST00000524165 APBB3O95704 486 aa19.22■□□□□ 0.67
PVT1-220ENST00000524165 WEE1P30291 646 aa19.22■□□□□ 0.67
PVT1-220ENST00000524165 CTTNQ14247 550 aaKnown RBP19.22■□□□□ 0.67
PVT1-220ENST00000524165 CTXN3Q4LDR2 81 aa19.22■□□□□ 0.67
PVT1-220ENST00000524165 CDCA2Q69YH5 1023 aaPredicted RBP19.22■□□□□ 0.67
PVT1-220ENST00000524165 SYT13Q7L8C5 426 aa19.22■□□□□ 0.67
PVT1-220ENST00000524165 CYP2U1Q7Z449 544 aa19.22■□□□□ 0.67
PVT1-220ENST00000524165 PIP4P1Q86T03 277 aa19.22■□□□□ 0.67
PVT1-220ENST00000524165 ADAM32Q8TC27 787 aa19.22■□□□□ 0.67
PVT1-220ENST00000524165 BPIFB1Q8TDL5 484 aa19.22■□□□□ 0.67
PVT1-220ENST00000524165 POLR3FQ9H1D9 316 aaPredicted RBP19.22■□□□□ 0.67
PVT1-220ENST00000524165 GOLGA2P5Q9HBQ8 144 aa19.22■□□□□ 0.67
PVT1-220ENST00000524165 GDAQ9Y2T3 454 aa19.22■□□□□ 0.67
PVT1-220ENST00000524165 APC2O95996 2303 aa19.22■□□□□ 0.67
PVT1-220ENST00000524165 CELSR3Q9NYQ7 3312 aa19.22■□□□□ 0.67
PVT1-220ENST00000524165 CCDC194A0A1B0GVG4 234 aa19.21■□□□□ 0.67
PVT1-220ENST00000524165 SPAARA0A1B0GVQ0 90 aa19.21■□□□□ 0.67
PVT1-220ENST00000524165 LRRIQ4A6NIV6 560 aa19.21■□□□□ 0.67
PVT1-220ENST00000524165 TTLL13PA6NNM8 815 aa19.21■□□□□ 0.67
PVT1-220ENST00000524165 SEC24BO95487 1268 aa19.21■□□□□ 0.67
PVT1-220ENST00000524165 CYP4A11Q02928 519 aa19.21■□□□□ 0.67
PVT1-220ENST00000524165 PLD1Q13393 1074 aa19.21■□□□□ 0.67
PVT1-220ENST00000524165 PRPF4BQ13523 1007 aaKnown RBP19.21■□□□□ 0.67
PVT1-220ENST00000524165 NTRK3Q16288 839 aa19.21■□□□□ 0.67
PVT1-220ENST00000524165 STXBP5Q5T5C0 1151 aa19.21■□□□□ 0.67
PVT1-220ENST00000524165 PPP4R3AQ6IN85 833 aa19.21■□□□□ 0.67
PVT1-220ENST00000524165 GPIHBP1Q8IV16 184 aa19.21■□□□□ 0.67
PVT1-220ENST00000524165 TPH2Q8IWU9 490 aa19.21■□□□□ 0.67
PVT1-220ENST00000524165 ANKEF1Q9NU02 776 aa19.21■□□□□ 0.67
PVT1-220ENST00000524165 POLR3BQ9NW08 1133 aaPredicted RBP19.21■□□□□ 0.67
PVT1-220ENST00000524165 THG1LQ9NWX6 298 aaKnown RBP19.21■□□□□ 0.67
PVT1-220ENST00000524165 YIPF1Q9Y548 306 aa19.21■□□□□ 0.67
PVT1-220ENST00000524165 MYO16Q9Y6X6 1858 aa19.21■□□□□ 0.67
PVT1-220ENST00000524165 TNRC6BQ9UPQ9 1833 aaKnown RBP19.21■□□□□ 0.67
PVT1-220ENST00000524165 ASXL3Q9C0F0 2248 aa19.2■□□□□ 0.66
PVT1-220ENST00000524165 SLITRK3O94933 977 aa19.2■□□□□ 0.66
PVT1-220ENST00000524165 LYPLA2O95372 231 aa19.2■□□□□ 0.66
PVT1-220ENST00000524165 SCAPQ12770 1279 aa19.2■□□□□ 0.66
PVT1-220ENST00000524165 TMEM132AQ24JP5 1023 aa19.2■□□□□ 0.66
PVT1-220ENST00000524165 FBXO43Q4G163 708 aa19.2■□□□□ 0.66
PVT1-220ENST00000524165 ZNF280DQ6N043 979 aa19.2■□□□□ 0.66
PVT1-220ENST00000524165 ZBTB8OSQ8IWT0 167 aa19.2■□□□□ 0.66
PVT1-220ENST00000524165 BLIDQ8IZY5 108 aa19.2■□□□□ 0.66
PVT1-220ENST00000524165 CHCHD4Q8N4Q1 142 aa19.2■□□□□ 0.66
PVT1-220ENST00000524165 SLC26A6Q9BXS9 759 aa19.2■□□□□ 0.66
PVT1-220ENST00000524165 EGFP01133 1207 aa19.19■□□□□ 0.66
PVT1-220ENST00000524165 DRD1P21728 446 aa19.19■□□□□ 0.66
PVT1-220ENST00000524165 MCM2P49736 904 aa19.19■□□□□ 0.66
PVT1-220ENST00000524165 SEMA3BQ13214 749 aa19.19■□□□□ 0.66
PVT1-220ENST00000524165 ZNF423Q2M1K9 1284 aa19.19■□□□□ 0.66
PVT1-220ENST00000524165 DCAF4L1Q3SXM0 396 aa19.19■□□□□ 0.66
PVT1-220ENST00000524165 TSGA10IPQ3SY00 556 aa19.19■□□□□ 0.66
PVT1-220ENST00000524165 USP39Q53GS9 565 aaKnown RBP19.19■□□□□ 0.66
PVT1-220ENST00000524165 NCAPH2Q6IBW4 605 aa19.19■□□□□ 0.66
PVT1-220ENST00000524165 RNF19BQ6ZMZ0 732 aa19.19■□□□□ 0.66
PVT1-220ENST00000524165 RAB44Q7Z6P3 723 aaPredicted RBP19.19■□□□□ 0.66
PVT1-220ENST00000524165 DAGLBQ8NCG7 672 aa19.19■□□□□ 0.66
PVT1-220ENST00000524165 BEST2Q8NFU1 509 aa19.19■□□□□ 0.66
PVT1-220ENST00000524165 HAS1Q92839 578 aa19.19■□□□□ 0.66
PVT1-220ENST00000524165 CHFRQ96EP1 664 aa19.19■□□□□ 0.66
PVT1-220ENST00000524165 ESYT1Q9BSJ8 1104 aa19.19■□□□□ 0.66
PVT1-220ENST00000524165 SMIM28A0A1B0GU29 152 aa19.18■□□□□ 0.66
PVT1-220ENST00000524165 ACKR2O00590 384 aa19.18■□□□□ 0.66
PVT1-220ENST00000524165 PODXLO00592 558 aa19.18■□□□□ 0.66
PVT1-220ENST00000524165 FGF19O95750 216 aa19.18■□□□□ 0.66
PVT1-220ENST00000524165 CPB1P15086 417 aa19.18■□□□□ 0.66
PVT1-220ENST00000524165 GCFC2P16383 781 aaKnown RBP19.18■□□□□ 0.66
PVT1-220ENST00000524165 IFNAR1P17181 557 aa19.18■□□□□ 0.66
PVT1-220ENST00000524165 DGKEP52429 567 aa19.18■□□□□ 0.66
PVT1-220ENST00000524165 EPHB3P54753 998 aa19.18■□□□□ 0.66
PVT1-220ENST00000524165 AMPD2Q01433 879 aa19.18■□□□□ 0.66
PVT1-220ENST00000524165 SOX4Q06945 474 aaPredicted RBP19.18■□□□□ 0.66
PVT1-220ENST00000524165 DMC1Q14565 340 aa19.18■□□□□ 0.66
PVT1-220ENST00000524165 MAPK6Q16659 721 aa19.18■□□□□ 0.66
PVT1-220ENST00000524165 INF2Q27J81 1249 aa19.18■□□□□ 0.66
PVT1-220ENST00000524165 ADCK5Q3MIX3 580 aa19.18■□□□□ 0.66
PVT1-220ENST00000524165 ARHGAP15Q53QZ3 475 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms