RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 REXO1Q8N1G1 1221 aaKnown RBP6.92□□□□□ -1.3
SDC2-208ENST00000523877 ANKRD35Q8N283 1001 aa6.92□□□□□ -1.3
SDC2-208ENST00000523877 C2orf69Q8N8R5 385 aa6.92□□□□□ -1.3
SDC2-208ENST00000523877 FAM71DQ8N9W8 422 aa6.92□□□□□ -1.3
SDC2-208ENST00000523877 MARCH10Q8NA82 808 aaPredicted RBP6.92□□□□□ -1.3
SDC2-208ENST00000523877 LPCAT1Q8NF37 534 aa6.92□□□□□ -1.3
SDC2-208ENST00000523877 CIDECQ96AQ7 238 aaPredicted RBP6.92□□□□□ -1.3
SDC2-208ENST00000523877 SEC16BQ96JE7 1060 aa6.92□□□□□ -1.3
SDC2-208ENST00000523877 GJD4Q96KN9 370 aaPredicted RBP6.92□□□□□ -1.3
SDC2-208ENST00000523877 CNOT6LQ96LI5 555 aaKnown RBP6.92□□□□□ -1.3
SDC2-208ENST00000523877 TRAPPC9Q96Q05 1148 aa6.92□□□□□ -1.3
SDC2-208ENST00000523877 ERP44Q9BS26 406 aa6.92□□□□□ -1.3
SDC2-208ENST00000523877 CARD6Q9BX69 1037 aa6.92□□□□□ -1.3
SDC2-208ENST00000523877 IFIH1Q9BYX4 1025 aaKnown RBP6.92□□□□□ -1.3
SDC2-208ENST00000523877 TXLNGYQ9BZA5 131 aa6.92□□□□□ -1.3
SDC2-208ENST00000523877 KRT23Q9C075 422 aa6.92□□□□□ -1.3
SDC2-208ENST00000523877 UBE2OQ9C0C9 1292 aaKnown RBP6.92□□□□□ -1.3
SDC2-208ENST00000523877 SRCIN1Q9C0H9 1055 aa6.92□□□□□ -1.3
SDC2-208ENST00000523877 MYLK2Q9H1R3 596 aa6.92□□□□□ -1.3
SDC2-208ENST00000523877 SYNDIG1Q9H7V2 258 aa6.92□□□□□ -1.3
SDC2-208ENST00000523877 MRPL40Q9NQ50 206 aaKnown RBP6.92□□□□□ -1.3
SDC2-208ENST00000523877 POLR3BQ9NW08 1133 aaPredicted RBP6.92□□□□□ -1.3
SDC2-208ENST00000523877 GPRC5BQ9NZH0 403 aa6.92□□□□□ -1.3
SDC2-208ENST00000523877 OR6C2Q9NZP2 312 aa6.92□□□□□ -1.3
SDC2-208ENST00000523877 SAMD15Q9P1V8 674 aa6.92□□□□□ -1.3
SDC2-208ENST00000523877 UBA2Q9UBT2 640 aaPredicted RBP6.92□□□□□ -1.3
SDC2-208ENST00000523877 SEC63Q9UGP8 760 aaKnown RBP6.92□□□□□ -1.3
SDC2-208ENST00000523877 TRHDEQ9UKU6 1024 aa6.92□□□□□ -1.3
SDC2-208ENST00000523877 PCDHGB5Q9Y5G0 923 aa6.92□□□□□ -1.3
SDC2-208ENST00000523877 FRMPD2Q68DX3 1309 aaPredicted RBP6.92□□□□□ -1.3
SDC2-208ENST00000523877 EIF3AQ14152 1382 aaKnown RBP6.92□□□□□ -1.3
SDC2-208ENST00000523877 ABCA10Q8WWZ4 1543 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 RGSL1A5PLK6 1076 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 A6NHS1 94 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 B4E171 279 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 BTBD19C9JJ37 291 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 H3BRJ5 948 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 AXIN1O15169 862 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 ADCY3O60266 1144 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 SEC22BO75396 215 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 ABLIM3O94929 683 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 CCNDBP1O95273 360 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 STARD3NLO95772 234 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 F13A1P00488 732 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 EGFRP00533 1210 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 WEE2P0C1S8 567 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 USP17L8P0C7I0 530 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 GSTT2P0CG29 244 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 GSTT2BP0CG30 244 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 H2AFXP16104 143 aaPredicted RBP6.91□□□□□ -1.3
SDC2-208ENST00000523877 CPEP16870 476 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 ARHGAP25P42331 645 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 AFF1P51825 1210 aaKnown RBP6.91□□□□□ -1.3
SDC2-208ENST00000523877 COPS2P61201 443 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 MRPS25P82663 173 aaKnown RBP6.91□□□□□ -1.3
SDC2-208ENST00000523877 PRKCEQ02156 737 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 FKBP4Q02790 459 aaKnown RBP eCLIP6.91□□□□□ -1.3
SDC2-208ENST00000523877 PPARDQ03181 441 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 FUT2Q10981 343 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 ERV3-1Q14264 604 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 GBX1Q14549 363 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 GRM3Q14832 879 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 ODF1Q14990 250 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 PFKFB3Q16875 520 aaPredicted RBP6.91□□□□□ -1.3
SDC2-208ENST00000523877 CDONQ4KMG0 1287 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 PRR16Q569H4 304 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 CLVS2Q5SYC1 327 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 ZNF362Q5T0B9 420 aaPredicted RBP6.91□□□□□ -1.3
SDC2-208ENST00000523877 TRIM65Q6PJ69 517 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 TPTE2Q6XPS3 522 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 KIF6Q6ZMV9 814 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 DPP9Q86TI2 863 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 TPH2Q8IWU9 490 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 LRRC34Q8IZ02 419 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 OR7G1Q8NGA0 311 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 INPP5DQ92835 1189 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 EMID1Q96A84 441 aaPredicted RBP6.91□□□□□ -1.3
SDC2-208ENST00000523877 SGF29Q96ES7 293 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 CHMP6Q96FZ7 201 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 ACSBG1Q96GR2 724 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 METTL2AQ96IZ6 378 aaKnown RBP6.91□□□□□ -1.3
SDC2-208ENST00000523877 SLC4A9Q96Q91 983 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 TXN2Q99757 166 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 TREX2Q9BQ50 279 aaPredicted RBP6.91□□□□□ -1.3
SDC2-208ENST00000523877 CRB3Q9BUF7 120 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 MOV10L1Q9BXT6 1211 aaKnown RBP6.91□□□□□ -1.3
SDC2-208ENST00000523877 MRPL1Q9BYD6 325 aaKnown RBP6.91□□□□□ -1.3
SDC2-208ENST00000523877 PAIP1Q9H074 479 aaKnown RBP6.91□□□□□ -1.3
SDC2-208ENST00000523877 CCDC8Q9H0W5 538 aaPredicted RBP6.91□□□□□ -1.3
SDC2-208ENST00000523877 CARD9Q9H257 536 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 TFB2MQ9H5Q4 396 aaKnown RBP6.91□□□□□ -1.3
SDC2-208ENST00000523877 CCDC86Q9H6F5 360 aaKnown RBP6.91□□□□□ -1.3
SDC2-208ENST00000523877 GORASP2Q9H8Y8 452 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 SLC38A10Q9HBR0 1119 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 PFDN4Q9NQP4 134 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 TLR7Q9NYK1 1049 aaKnown RBP6.91□□□□□ -1.3
SDC2-208ENST00000523877 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.91□□□□□ -1.3
SDC2-208ENST00000523877 IFT80Q9P2H3 777 aaPredicted RBP6.91□□□□□ -1.3
SDC2-208ENST00000523877 LIMD1Q9UGP4 676 aa6.91□□□□□ -1.3
SDC2-208ENST00000523877 SAP30BPQ9UHR5 308 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms