RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 GASTP01350 101 aa4.77□□□□□ -1.65
HDAC2-208ENST00000520746 HMGB1P09429 215 aaKnown RBP4.77□□□□□ -1.65
HDAC2-208ENST00000520746 PF4V1P10720 104 aa4.77□□□□□ -1.65
HDAC2-208ENST00000520746 ECHS1P30084 290 aa4.77□□□□□ -1.65
HDAC2-208ENST00000520746 ADKP55263 362 aaKnown RBP4.77□□□□□ -1.65
HDAC2-208ENST00000520746 PER3P56645 1201 aa4.77□□□□□ -1.65
HDAC2-208ENST00000520746 OCA2Q04671 838 aa4.77□□□□□ -1.65
HDAC2-208ENST00000520746 SPDYE7PQ495Y7 208 aa4.77□□□□□ -1.65
HDAC2-208ENST00000520746 ZNF480Q8WV37 535 aa4.77□□□□□ -1.65
HDAC2-208ENST00000520746 COA7Q96BR5 231 aa4.77□□□□□ -1.65
HDAC2-208ENST00000520746 PDLIM2Q96JY6 352 aa4.77□□□□□ -1.65
HDAC2-208ENST00000520746 UHRF1Q96T88 793 aaPredicted RBP4.77□□□□□ -1.65
HDAC2-208ENST00000520746 ZSWIM1Q9BR11 485 aa4.77□□□□□ -1.65
HDAC2-208ENST00000520746 RTFDC1Q9BY42 306 aaPredicted RBP4.77□□□□□ -1.65
HDAC2-208ENST00000520746 RHOBTB2Q9BYZ6 727 aa4.77□□□□□ -1.65
HDAC2-208ENST00000520746 KLK15Q9H2R5 256 aa4.77□□□□□ -1.65
HDAC2-208ENST00000520746 NOX1Q9Y5S8 564 aa4.77□□□□□ -1.65
HDAC2-208ENST00000520746 SYNJ1O43426 1573 aa4.77□□□□□ -1.65
HDAC2-208ENST00000520746 FAM171A2A8MVW0 826 aa4.76□□□□□ -1.65
HDAC2-208ENST00000520746 VCAM1P19320 739 aa4.76□□□□□ -1.65
HDAC2-208ENST00000520746 CRHR1P34998 444 aa4.76□□□□□ -1.65
HDAC2-208ENST00000520746 CLRN1P58418 232 aa4.76□□□□□ -1.65
HDAC2-208ENST00000520746 MGAT2Q10469 447 aa4.76□□□□□ -1.65
HDAC2-208ENST00000520746 SEPT2Q15019 361 aa4.76□□□□□ -1.65
HDAC2-208ENST00000520746 PPP2R5AQ15172 486 aa4.76□□□□□ -1.65
HDAC2-208ENST00000520746 LRRC41Q15345 812 aa4.76□□□□□ -1.65
HDAC2-208ENST00000520746 NFE2Q16621 373 aaPredicted RBP4.76□□□□□ -1.65
HDAC2-208ENST00000520746 MST1LQ2TV78 715 aa4.76□□□□□ -1.65
HDAC2-208ENST00000520746 GJC2Q5T442 439 aaPredicted RBP4.76□□□□□ -1.65
HDAC2-208ENST00000520746 TSHZ3Q63HK5 1081 aa4.76□□□□□ -1.65
HDAC2-208ENST00000520746 Q6ZVL8 140 aa4.76□□□□□ -1.65
HDAC2-208ENST00000520746 CHPFQ8IZ52 775 aa4.76□□□□□ -1.65
HDAC2-208ENST00000520746 OR2I1PQ8NGU4 316 aa4.76□□□□□ -1.65
HDAC2-208ENST00000520746 RNF31Q96EP0 1072 aa4.76□□□□□ -1.65
HDAC2-208ENST00000520746 C7orf25Q9BPX7 421 aa4.76□□□□□ -1.65
HDAC2-208ENST00000520746 C1QTNF7Q9BXJ2 289 aa4.76□□□□□ -1.65
HDAC2-208ENST00000520746 SLC29A3Q9BZD2 475 aa4.76□□□□□ -1.65
HDAC2-208ENST00000520746 CDH19Q9H159 772 aa4.76□□□□□ -1.65
HDAC2-208ENST00000520746 TCF7L1Q9HCS4 588 aa4.76□□□□□ -1.65
HDAC2-208ENST00000520746 TMEM74BQ9NUR3 256 aa4.76□□□□□ -1.65
HDAC2-208ENST00000520746 LRIT1Q9P2V4 623 aa4.76□□□□□ -1.65
HDAC2-208ENST00000520746 SERPINB13Q9UIV8 391 aa4.76□□□□□ -1.65
HDAC2-208ENST00000520746 LIMCH1Q9UPQ0 1083 aa4.76□□□□□ -1.65
HDAC2-208ENST00000520746 FGD5Q6ZNL6 1462 aa4.75□□□□□ -1.65
HDAC2-208ENST00000520746 PNPLA7Q6ZV29 1317 aa4.75□□□□□ -1.65
HDAC2-208ENST00000520746 CCDC154A6NI56 674 aa4.75□□□□□ -1.65
HDAC2-208ENST00000520746 HTRA2O43464 458 aaPredicted RBP4.75□□□□□ -1.65
HDAC2-208ENST00000520746 PROP1O75360 226 aa4.75□□□□□ -1.65
HDAC2-208ENST00000520746 ENDOD1O94919 500 aa4.75□□□□□ -1.65
HDAC2-208ENST00000520746 PTPN7P35236 360 aa4.75□□□□□ -1.65
HDAC2-208ENST00000520746 WASP42768 502 aa4.75□□□□□ -1.65
HDAC2-208ENST00000520746 PROK1P58294 105 aa4.75□□□□□ -1.65
HDAC2-208ENST00000520746 CXADRP78310 365 aa4.75□□□□□ -1.65
HDAC2-208ENST00000520746 MRPS35P82673 323 aaKnown RBP4.75□□□□□ -1.65
HDAC2-208ENST00000520746 FAM47AQ5JRC9 791 aa4.75□□□□□ -1.65
HDAC2-208ENST00000520746 MED25Q71SY5 747 aa4.75□□□□□ -1.65
HDAC2-208ENST00000520746 MIGA2Q7L4E1 593 aa4.75□□□□□ -1.65
HDAC2-208ENST00000520746 RHOT1Q8IXI2 618 aa4.75□□□□□ -1.65
HDAC2-208ENST00000520746 PQLC1Q8N2U9 271 aa4.75□□□□□ -1.65
HDAC2-208ENST00000520746 C9orf106Q8NAJ2 232 aa4.75□□□□□ -1.65
HDAC2-208ENST00000520746 REPS2Q8NFH8 660 aa4.75□□□□□ -1.65
HDAC2-208ENST00000520746 FBXO18Q8NFZ0 1043 aa4.75□□□□□ -1.65
HDAC2-208ENST00000520746 OR7D4Q8NG98 312 aa4.75□□□□□ -1.65
HDAC2-208ENST00000520746 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.75□□□□□ -1.65
HDAC2-208ENST00000520746 ACTRT2Q8TDY3 377 aa4.75□□□□□ -1.65
HDAC2-208ENST00000520746 HDAC10Q969S8 669 aa4.75□□□□□ -1.65
HDAC2-208ENST00000520746 ZNF778Q96MU6 729 aa4.75□□□□□ -1.65
HDAC2-208ENST00000520746 CASS4Q9NQ75 786 aa4.75□□□□□ -1.65
HDAC2-208ENST00000520746 TBCCD1Q9NVR7 557 aa4.75□□□□□ -1.65
HDAC2-208ENST00000520746 NOB1Q9ULX3 412 aaKnown RBP4.75□□□□□ -1.65
HDAC2-208ENST00000520746 PCDHA13Q9Y5I0 950 aa4.75□□□□□ -1.65
HDAC2-208ENST00000520746 TARBP1Q13395 1621 aaKnown RBP4.75□□□□□ -1.65
HDAC2-208ENST00000520746 SYNJ2O15056 1496 aa4.75□□□□□ -1.65
HDAC2-208ENST00000520746 MAGI1Q96QZ7 1491 aaPredicted RBP4.75□□□□□ -1.65
HDAC2-208ENST00000520746 A0A1B0GTW7 788 aa4.74□□□□□ -1.65
HDAC2-208ENST00000520746 CCDC78A2IDD5 438 aa4.74□□□□□ -1.65
HDAC2-208ENST00000520746 WNT10BO00744 389 aa4.74□□□□□ -1.65
HDAC2-208ENST00000520746 SCGB1D2O95969 90 aa4.74□□□□□ -1.65
HDAC2-208ENST00000520746 SNRPA1P09661 255 aaKnown RBP4.74□□□□□ -1.65
HDAC2-208ENST00000520746 EDNRBP24530 442 aa4.74□□□□□ -1.65
HDAC2-208ENST00000520746 SREBF1P36956 1147 aa4.74□□□□□ -1.65
HDAC2-208ENST00000520746 ZNF81P51508 661 aa4.74□□□□□ -1.65
HDAC2-208ENST00000520746 IL10RAQ13651 578 aa4.74□□□□□ -1.65
HDAC2-208ENST00000520746 C3orf36Q3SXR2 165 aa4.74□□□□□ -1.65
HDAC2-208ENST00000520746 RRP12Q5JTH9 1297 aaKnown RBP4.74□□□□□ -1.65
HDAC2-208ENST00000520746 TPH2Q8IWU9 490 aa4.74□□□□□ -1.65
HDAC2-208ENST00000520746 CCHCR1Q8TD31 782 aa4.74□□□□□ -1.65
HDAC2-208ENST00000520746 STON2Q8WXE9 905 aa4.74□□□□□ -1.65
HDAC2-208ENST00000520746 HOXB13Q92826 284 aaPredicted RBP4.74□□□□□ -1.65
HDAC2-208ENST00000520746 NACC2Q96BF6 587 aa4.74□□□□□ -1.65
HDAC2-208ENST00000520746 BOD1Q96IK1 185 aa4.74□□□□□ -1.65
HDAC2-208ENST00000520746 CAMKK2Q96RR4 588 aa4.74□□□□□ -1.65
HDAC2-208ENST00000520746 AIFM2Q9BRQ8 373 aa4.74□□□□□ -1.65
HDAC2-208ENST00000520746 SENP6Q9GZR1 1112 aaPredicted RBP4.74□□□□□ -1.65
HDAC2-208ENST00000520746 LDAHQ9H6V9 325 aa4.74□□□□□ -1.65
HDAC2-208ENST00000520746 MANSC1Q9H8J5 431 aa4.74□□□□□ -1.65
HDAC2-208ENST00000520746 BCO1Q9HAY6 547 aa4.74□□□□□ -1.65
HDAC2-208ENST00000520746 GALNT9Q9HCQ5 603 aa4.74□□□□□ -1.65
HDAC2-208ENST00000520746 KMT5AQ9NQR1 393 aa4.74□□□□□ -1.65
HDAC2-208ENST00000520746 SLC17A6Q9P2U8 582 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms