RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 ARHGAP24Q8N264 748 aa11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 MSL3Q8N5Y2 521 aaKnown RBP11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 NLGN2Q8NFZ4 835 aa11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 ASB14A6NK59 587 aa11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 FANCGO15287 622 aa11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 NAMPTP43490 491 aa11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 PDE1BQ01064 536 aa11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 STAT4Q14765 748 aa11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 IER5Q5VY09 327 aa11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 PDZD4Q76G19 769 aaPredicted RBP11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 CDKL2Q92772 493 aa11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 GLTPD2A6NH11 291 aa11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 CDH16O75309 829 aa11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 SPAG7O75391 227 aa11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 CORO7P57737 925 aa11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 FOXR1Q6PIV2 292 aa11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 ZC3H18Q86VM9 953 aaKnown RBP11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 C1orf131Q8NDD1 294 aaKnown RBP11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 MYCBPAPQ8TBZ2 947 aa11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 PRPF31Q8WWY3 499 aaKnown RBP11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 LRRC4Q9HBW1 653 aa11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 ZFYVE28Q9HCC9 887 aa11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 NUB1Q9Y5A7 615 aa11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 UBIAD1Q9Y5Z9 338 aa11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 YDJCA8MPS7 323 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 TCP11X1B4DZS4 312 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 PIK3R2O00459 728 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 SDC4P31431 198 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 CDH6P55285 790 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 IFRD2Q12894 506 aaPredicted RBP11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 DGKZQ13574 1117 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 ATF7IP2Q5U623 682 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 SLC9A9Q8IVB4 645 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 MAP4K3Q8IVH8 894 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 LMNTD2Q8IXW0 634 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 GBP7Q8N8V2 638 aaPredicted RBP11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 TTC16Q8NEE8 873 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 SPIRE2Q8WWL2 714 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 KRT35Q92764 455 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 SMARCAD1Q9H4L7 1026 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 FZD1Q9UP38 647 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 CCL15-CCL14A0A0B4J2E2 113 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 BTNL10A8MVZ5 291 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 ATP9AO75110 1047 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 CAND2O75155 1236 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 PYGMP11217 842 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 FKBP1BP68106 108 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 PIGHQ14442 188 aaPredicted RBP11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 TAF1CQ15572 869 aaPredicted RBP11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 CCL15Q16663 113 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 EPS8L1Q8TE68 723 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 AGAP1Q9UPQ3 857 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 NEU2Q9Y3R4 380 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 SIPA1L3O60292 1781 aaPredicted RBP11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 DSG3P32926 999 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 HIF1AQ16665 826 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 KCTD19Q17RG1 926 aaPredicted RBP11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 CLEC16AQ2KHT3 1053 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 TMC3Q7Z5M5 1100 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 ANKMY2Q8IV38 441 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 ACSF2Q96CM8 615 aaPredicted RBP11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 KIF12Q96FN5 646 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 SEC16BQ96JE7 1060 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 MTMR12Q9C0I1 747 aa11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 N4BP2Q86UW6 1770 aaPredicted RBP11.9□□□□□ -0.5
PCDHGB4-201ENST00000519479 IGLV3-22A0A075B6J6 115 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 IQANK1A0A1B0GTG1 560 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 ADRB2P07550 413 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 GCLCP48506 637 aaPredicted RBP11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 GTF2BQ00403 316 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 NFX1Q12986 1120 aaKnown RBP11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 CYP4A22Q5TCH4 519 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 ZNF449Q6P9G9 518 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 EPS8L3Q8TE67 593 aaKnown RBP11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 KLC2Q9H0B6 622 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 FRMD3A2A2Y4 597 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 ITGB3BPQ13352 177 aaPredicted RBP11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 SMTNL2Q2TAL5 461 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 FBXW10Q5XX13 1052 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 C10orf71Q711Q0 1435 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 SEMA4AQ9H3S1 761 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 RRAGCQ9HB90 399 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 GGT7Q9UJ14 662 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 TMEM120BA0PK00 339 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 BCAR1P56945 870 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 CENPCQ03188 943 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 EFCAB12Q6NXP0 572 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 AADACL2Q6P093 401 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 VSIG10LQ86VR7 867 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 ATP11CQ8NB49 1132 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 PPP1R12CQ9BZL4 782 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 ROPN1BQ9BZX4 212 aaPredicted RBP11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 ROPN1Q9HAT0 212 aaPredicted RBP11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 LOC102724159A0A0B4J2E5 919 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 CCDC160A6NGH7 325 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 RASSF10A6NK89 507 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 RARGP13631 454 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 EIF3EP60228 445 aaKnown RBP11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 ZNF844Q08AG5 666 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms